Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101961515
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Entry
101961515 CDS
T10664
Symbol
Dcaf5
Name
(RefSeq) DDB1- and CUL4-associated factor 5 isoform X1
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101961515 (Dcaf5)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101961515 (Dcaf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_EML
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_WDR41
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
WD_LRWD1
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
101961515
NCBI-ProteinID:
XP_021580508
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
MEQAIHSRVKPIQLKGEHHSNIFCLAFNSGNTKVFSGGNDEQVILHDVESSETLDVFAHE
DAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGEPFCLANYPSAFHSVMFNPVEPRL
LATANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAMSVRFNSNGTQLLALRRRLPPVLYDI
HSRLPVFQFDNQGYFNSCTMKSCCFAGDRDQYILSGSDDFNLYMWRIPADPEAGGIGRVV
NGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKIIKIWSPYKQPGCTGDLDGRIEDDSRC
LYTHEEYISLVLNSGSGLSHDYANQSVQEDPRMMAFFDSLVRREIEGWSSDSDSDLSEST
ILQLHAGVSERSGYTDSESSASLPHSPPPTIDESADNAFHLGPLRVTTTNAVTSTPPTPT
CEDAASRQQRLSALRRYQDKRLLALSNESDSEENACEVELDTDLFPRPRSPSPEEESSSS
SSSSSSEDEEELNERRASTRQRNAMRRRQKIPREERPSAPAKPTNTYIGEDNYDYPQIKV
DDLSSSPTSSPERSTSTLEIQPSRASPTSDIESVERKIYKAYKWLRYSYISYSNNKDGET
SLVTGEADEGRAGTSHKDSPAPSSSKEICLNTTMVPRNQDLPPEGCSKDAFKEGTSTRNP
SSVPGYEHSSQPWTEAPEGTSQDGNNGGSVEHSFETKKLNGKALSSRAEEPPSPPMPKTS
GSILNSGSGNCPRTQSDDSEERSLETICANHNNGRLHPRPPHPHNNGQNFGELEVVAYSS
PGHSDTDHDNSSLTGTLLHKDCCGSEITCETPNAGTREEPTDTTDSSRAVHGHSGFKRHR
VELEDTDSENCSSEKKFKT
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagcgatccactccagagtcaagcccatacaactgaaaggagagcaccattcc
aacattttttgcctggctttcaacagtggaaacaccaaagtgttctctggaggaaatgat
gagcaagttatccttcatgatgttgaaagcagcgagaccttggatgtgtttgctcatgaa
gatgcagtatatggcttatcagtgagcccagtaaatgacaacatttttgccagctcttca
gatgatggtcgggttctcatttgggacatccgggagtctccccatggagagcccttctgc
ctggcaaactacccatcagcctttcacagtgtcatgtttaaccctgtggagcccaggtta
ttggccacagccaattcaaaggaaggagtgggactctgggatatccgaaaacctcagagt
tctctcctgcgctatggtggcaacctgtctctccaaagtgccatgagtgtgcgattcaat
agcaatgggacccagctcctggccctgcggcgtcgcctgccccctgtactttatgacatc
cactcccgcctgccagtgttccagtttgacaatcagggttacttcaactcatgcaccatg
aaaagctgctgttttgcaggagatcgtgaccagtatatcctttcaggctctgatgacttc
aacctgtacatgtggagaattcctgcagacccagaagcaggtggcattggcagggtggtc
aatggagccttcatggtgctgaaagggcatcgttctatcgttaaccaggtccgatttaat
ccccacacctacatgatctgctcttctggtgtagaaaagattatcaagatctggagccca
tacaagcagccaggatgcaccggagacctggatggccgaattgaggacgattcccgctgc
ctctacacccacgaagagtacattagccttgtgctgaacagcggaagtggcctgtcgcat
gactatgccaaccagtcggtccaagaagacccccggatgatggctttctttgactctctg
gtacgccgagagattgagggctggagctctgattcagacagtgacctcagtgaaagtacc
atccttcagctacatgcaggggtcagcgagcgctcaggctatactgactctgagtcttca
gcctcactgccccactctccacctcccacaatagatgagtctgctgacaatgccttccat
ctgggtcccctgcgagtcaccactacaaatgcagtgacatcaaccccaccaacacccacg
tgtgaggatgcagcctctcgccaacagcgcctgtctgctctgcgtcgctaccaggacaag
cgcctcctggccctgtccaatgagtctgattctgaagagaatgcctgtgaggttgaacta
gacacagacctcttcccccgaccacgatcacctagccctgaagaggaatccagcagttcc
agcagttccagcagctcagaggatgaggaggagctgaatgaacgccgagcctccacccga
cagcgaaatgccatgcggaggcgacagaaaatacccagagaagagaggcccagtgcccca
gccaagcccaccaacacctacattggagaagacaactatgattacccccagattaaagtg
gatgacctttcctcttcccctacctcctcccctgagcggagcacttccactctggagatt
cagccaagccgggcatcaccaacttctgacatagaatcagttgagcgaaaaatttataaa
gcttacaaatggctgcgctactcctatatctcctactcaaataacaaagatggagagact
tccctggtgacaggagaggcagatgaagggagagcaggaaccagccacaaagacagccca
gcaccttcttccagtaaggaaatctgcctaaacacaaccatggtcccgaggaaccaggac
ctgccacctgaaggctgcagtaaggatgcttttaaagaagggacttccactagaaatccc
agcagtgtcccaggctatgagcacagcagccaaccttggaccgaggcaccagagggtacc
tctcaggacggtaacaatggtggctctgtagaacactcatttgaaaccaagaagctcaat
ggaaaggccctgagcagccgggctgaggaaccaccctctcctcctatgcccaagacatcg
ggctccattctcaacagcgggtctggaaactgtccgaggacccagtctgatgacagtgaa
gaaaggagccttgaaaccatctgtgccaatcacaacaatggacgcttgcacccccgaccc
cctcacccccacaacaatgggcagaactttggggagctagaggtggtggcctactcttcc
ccaggacattcagacactgaccatgataactcatccctgacagggacactcctacacaaa
gattgttgtgggtctgaaataacctgtgagactcctaatgctggaacaagagaggagccc
actgacaccacagacagcagcagggctgttcatggccacagtggcttcaaaaggcaccga
gtcgaattggaagacacagattcagagaattgctcctcagagaagaaatttaaaacatga
DBGET
integrated database retrieval system
