Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101961565
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Entry
101961565 CDS
T10664
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101961565
Membrane trafficking [BR:
iti04131
]
Endocytosis
Others
Others
101961565
Endosome - Lysosome transport
101961565
Endosome - Golgi transport
101961565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
101961565
NCBI-ProteinID:
XP_005333636
UniProt:
I3MPY6
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MEAARTERPTGWPGAPLARTGLLLLSTWVLAGAEITWGSTGGPGRLTASRSSALPPLLPR
AVANRWREELATARRPAALGRRPRPELLPQSRGIEMQVGAEGTSPEGARWVQGIPAPGKP
GGTRRSRRAQPPSALERGDARATASAEGSKGSRPLAKGSREEVKAPRTGGPAAEELRLPS
TSFALTGDSAHNQAMVHWSGHNSSVILILTKLYDFNLGSVTESSLWRSTDYGTTYEKLND
KVGLKTVLSYLYVNPTNKRKIMLLSDPEMESSILISSDEGATYQKYRLTFYIQSLLFHPK
QEDWVLAYSLDQKLYSSMDFGRRWQLMHERITPNRFYWSVAGLDKEADLVHMEVRTADGY
AHYLTCRIQECAETTRSGPFARSIDISSLVVQDEYIFIQVTTGGRASYYVSYRREAFAQI
KLPKYSLPKDMHIISTDENQVFAAVQEWNQNDTYNLYISDTRGIYFTLAMENIKSSRGLM
GNIIIELYEVAGIKGIFLANKKVDDQVKTYITYNKGRDWRLLQAPDVDLRGSPVHCLLPF
CSLHLHLQLSENPYSSGRISSKETAPGLVVATGNIGPELSYTDIGVFISSDGGNTWRQIF
DEEYNVWFLDWGGALVAMKHTPLPVRHLWVSFDEGHSWDKYSFTLLPLFVDGALVEAGVE
THIMTVFGHFSLRSEWQLVKVDYKSIFSRRCTKEDYQTWHLLNQGEPCVMGERKIFKKRK
PGAQCALGRDYSGSVVSEPCVCADWDFECDYGYERHGESQCVPAFWYNPASPSKDCSLGQ
SYLNSTGYRRIVSNNCTDGVRDKYSAKAQLCPGKAPRGLHVVTTDGRLVAEQGHNATFII
LMEEGDLQRTNIQLDFGDGIAVSYANFSPIEDGIKHVYKSAGIFQVTAYAENSLGSDTAV
LFLHVVCPVEHVHLRVPFVAIRNKEVNISAVVWPSQLGTLTYFWWFGNSTKPLITLDSST
SFTFLAEGTNTITVQVAAGNALIQDTKDIAVHEYFQSQLLSFSPNLDFHNPDIPEWRQDI
GNVIKKALVKVTSVPEDQVLVAVFPGLPTSAELFILPPKNLTERRKGHEGDLEQIVEILF
NALNQNLVQFELKPGVQVIVYVTQLTLAPLVDSSAGHSSSAMLMLLSVVFVGLAVFLIYK
FKRKIPWINIYAQVQHDKEQEMIGSVSQSENAPKITLSDFTEPEELLEKELDTRVLGGIA
TIANSESTKEIPNCTSV
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgcgcacggagcgccccacaggctggccaggggcgcccctcgcccggaca
gggcttctactcctgtcaacgtgggtcctggccggtgccgagatcacttggggctcaacg
ggcggtcccgggcgcctcacggcttctcggtcatcggcgttgcctcctctgttgccgcgg
gcagtggcgaaccggtggcgggaggagctggcgacggcgcggagacccgccgcgctgggg
cgccggcccagaccagagctgctgccccagtctcggggcattgagatgcaggttggagcc
gagggtacgtcgcctgaaggcgcgcggtgggtccagggcatcccggctcctggcaagcct
ggcggcacgaggaggagtcgccgggcacagccccccagcgccctggagcgcggggacgcc
cgggctacggcttctgccgaaggttccaaaggaagccgccctctggctaaaggttcccgg
gaggaggtgaaggcccctcggactgggggaccagcggctgaagagctccgactgcctagt
acttctttcgcgctgaccggggactcggcccacaaccaagcaatggtgcactggtccgga
cacaacagcagtgtcatcctgatcctgacgaagctgtacgacttcaacctggggagcgtg
actgagagttctctttggcggtcaacagattacggcaccacctatgaaaagctgaatgac
aaagtgggtttaaagactgtcctcagttacctctatgtcaatcccaccaacaaaaggaag
atcatgcttcttagtgatcctgaaatggaaagcagcatattgatcagctcagacgaaggg
gccacgtatcaaaagtaccgcctcaccttctacatccagagcctgctctttcatcccaag
caagaggactgggtgctggcctacagtttggatcaaaagctctacagctccatggacttt
ggaagacggtggcagctcatgcatgagcgcatcacacccaacaggttttactggtcggtg
gccggactggataaggaggcggacctggtgcacatggaggtgcggactgctgacggatat
gctcactacctcacctgcaggatccaggaatgtgcagagacaactcggagtggtcccttt
gcccgctccattgacatcagctctctggttgtccaggacgaatatatcttcattcaggta
actaccggtggaagagccagctactatgtatcctatcgaagagaggcctttgctcagatc
aagctgcccaagtactccttgccgaaggacatgcacatcatcagtacagatgagaaccaa
gtgtttgcagccgtccaagagtggaaccagaatgacacctacaacctctacatctcagac
acacgtgggatctactttaccctggctatggagaacattaaaagcagccgaggtctaatg
gggaacatcattattgaattatatgaggtagcaggtatcaaagggatattcctggcaaac
aagaaggtggatgaccaggtgaagacttacatcacttacaacaaaggcagagattggcgc
ctactgcaagctccggatgtggacctgagaggaagcccagtgcactgcttgctgcccttc
tgttccttacacctgcacttgcagctctcagagaatccatattcctcaggcagaatctca
agtaaggagacagccccaggactggtggtggccacaggcaacattggcccggagctctcc
tatactgatatcggtgtgttcatctcctctgacgggggcaacacatggagacagatcttt
gatgaagagtacaatgtctggttcctagactggggtggcgccctcgtggccatgaaacac
acacctctgccagtcaggcatttgtgggtgagttttgacgaaggccactcctgggacaaa
tatagcttcacgttgcttcctctcttcgtggatggggctctggtggaggccggagtagag
acccacatcatgacagtctttggccacttcagcctccgctctgaatggcagttagtgaaa
gtggactacaagtcgatcttcagccggcgctgcaccaaggaggactatcagacctggcac
ctgctcaatcagggagagccttgcgtcatgggagaaagaaaaatattcaagaaacgcaag
ccaggagctcagtgtgccctgggccgagactactcggggtcagtggtctcagaaccctgt
gtctgtgccgattgggacttcgagtgcgactatggctatgagagacatggggagagccag
tgtgtcccagctttctggtacaatccagcatccccatcaaaggactgcagtcttggccag
agctacctgaacagcactgggtaccggaggattgtgtccaataactgcactgatggagta
agggacaaatactccgccaaggcccagttgtgtcccggaaaagcccctcggggcctccat
gtggtgacgactgatgggcgtctggtggcagagcagggacacaatgcaaccttcatcatc
ctcatggaagagggtgatctccaaaggacaaacatccagcttgactttggggatggcatt
gctgtgtcctatgctaacttcagcccaattgaagatggcatcaagcacgtgtacaagagt
gcagggatcttccaggtgacggcctatgcagagaacagccttggctccgacacagccgtc
ctcttcctgcatgtggtttgtcctgtggagcatgttcacctccgagttccatttgttgcc
ataagaaataaagaggtcaacatcagtgccgttgtgtggcccagtcaactggggacactt
acctatttctggtggttcggcaacagcacaaagcccctcatcaccttggacagcagcact
tccttcacattcctagcagagggaaccaacaccatcactgtccaggtggctgccgggaat
gccctcatccaggacactaaagatattgcagttcatgaatacttccagtcccagctcttg
tccttctctcctaatctggattttcacaatcctgacattcctgagtggaggcaagacatt
ggcaacgtcatcaagaaagccctggttaaagtgaccagtgtcccagaagaccaggtcctt
gttgctgtgttccctggcctccccacctcagcagagcttttcatcctcccacccaagaac
ttgacagagaggaggaaaggccacgaaggagacctagaacaaattgtagagatactgttt
aatgctctaaaccagaacttggtccagtttgagctgaaaccaggggtccaggtcattgtg
tatgtcacacagctgacattagctccactagtggattccagtgctggtcatagcagctcc
gccatgttgatgcttctgtcagtggtgtttgttggcctggctgtgtttttgatctataag
tttaaaaggaaaattccttggattaacatctatgcccaagtccaacatgacaaggagcag
gagatgatcgggtcagtgagccaaagtgaaaatgctcccaaaatcacactcagtgacttc
actgagcccgaggaattgctggaaaaagagttggacactcgggtcctaggaggcatcgca
accattgcgaacagcgaaagcacaaaggagatccccaactgtactagtgtttaa
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