Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101961609
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Entry
101961609 CDS
T10664
Symbol
Apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101961609 (Apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iti03400
]
101961609 (Apex1)
Enzymes [BR:
iti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
101961609 (Apex1)
DNA repair and recombination proteins [BR:
iti03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
101961609 (Apex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
101961609
NCBI-ProteinID:
XP_005341462
UniProt:
I3MEU6
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MRGSRNHISHPRGRKACSILCVRVRRCHAPTQAGNTVKVLFRWATWYWFRRAFVTGMPKR
GKKGAAAEDGEEPKTEPESKKSKVGAKKKEKETAGEGPVLYEDPPDKKTSPSGKSATLKI
CSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPPELQELPGLSHQYWAAPSD
KEGYSGVGLLSRQCPIKVSYGIGEEEHDQEGRVIVAEFDKFVLVTAYVPNAGRGLVRLEY
RQRWDEAFRQFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELL
QAVPLADSFRHLYPNTEYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKA
LGSDHCPITLYLAL
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggatcacgtaaccacatcagtcacccacgtgggcgcaaagcgtgctccattctt
tgtgttcgggtaaggaggtgccacgctccgacccaagcaggcaacacggtaaaagtactg
tttcggtgggcgacgtggtactggttccgaagggcgttcgttacagggatgccaaagcgt
gggaaaaagggagcggcggcagaagatggggaagagcccaaaactgagccagagtccaag
aagagtaaggtaggagcaaaaaaaaaagaaaaagagacagcaggagagggcccagtcctg
tatgaagaccctccagataagaaaacctcacccagtggcaaatctgccacactcaagatc
tgctcttggaatgttgatgggcttcgagcctggattaagaagaaaggtttagattgggta
aaggaagaagccccagatatcctgtgcctccaagagaccaaatgttcagagaataaacta
ccacctgaacttcaagagctgcctggattatcccatcagtactgggcagctccttcggac
aaggaaggatacagtggtgtgggtctactttcccgccagtgccccatcaaagtctcttat
ggcatcggtgaggaggaacatgatcaggaaggccgggtaattgtggctgaatttgacaag
tttgtgctggtaacagcctatgtacctaatgctggccggggtctggtaaggctggagtac
cgccagcgctgggatgaagcctttcgccaattcctgaagggcttggcttcccgcaagccc
cttgtgctatgtggggacctcaatgtggctcatgaagaaattgaccttcgtaaccccaaa
ggaaacaaaaaaaatgctggcttcactccacaggagcgccaaggctttggagaattgctg
caggctgtgccactggctgacagtttccgccacttgtaccccaacactgaatatgcctat
accttttggacttacatgatgaatgctcggtccaagaacgttggttggcgccttgattac
tttttgttgtcccactctcttttacctgcattgtgtgacagcaagattcgctccaaggcc
cttggcagtgatcactgtcccatcaccctatacctagcactgtga
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