Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101961636
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Entry
101961636 CDS
T10664
Name
(RefSeq) ATP-binding cassette sub-family A member 6
KO
K05649
ATP-binding cassette, subfamily A (ABC1), member 6
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti02010
ABC transporters
Brite
Transporters [BR:
iti02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
101961636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101961636
NCBI-ProteinID:
XP_040124460
LinkDB
All DBs
Position
Unknown
AA seq
1629 aa
AA seq
DB search
MRIKQTSVYQQTQALLCKNFLKKWRMKRESALEWGLPILLGLYVGLLSEVRENNQLPEIP
PQDLGRVDKFNVSSIMIVYTPVSNITQQIMNTTAFAPLMKGTRIIGVPNEKDMDDVIFQN
FPHAVGITFSDTFSYKLKFFQGYAVPFLRDDLTGHCWEIYGEYSCVLSKYWERGFVTLQT
IINAAIIEVTTNHSVIDELMSVTAINMKTLPFISKDIFQSEMFILYCLLYFSPFIYFVSH
NVTKERKKSKELMKMMGLHDSAFWLSWGLMYTAFILVLSIVITIIITSTQVILMTGFMVI
FTLLFLYGLSLLALSFLMSVLLQKAVLTNLFVFLLTLFWGFVGFTAFYKQLPPSVQWILS
ICSPFAFRVGMTQILHLDYNLNGVVFPDPSEKSYTMLATFSVLAFDGLIYLMLALYFDKI
LPYGNEHRYSPLFFLSSSSCFRHRRTDNRVIEKDLDPEHPSDGYFEPIASEFQGKEAIRI
RNVKKEYKTKSGQVKALKGVLFDIYEGQITAILGHSGAGKSSLLNILNGLSVPTEGSVTI
YNKNLSEMQDLEEIRQITGVCPQNNVQIDMLTVKENLSLFAKIKGIRPQEVEQEVQQILL
ELDMQNIQDNLAIHLSDGQKRMLTFGIAILGDPQVLLLDEPTAGLDPFSRHQVWTFLKER
RVNRVILFSTQSMEEADILADRKVIMSNGELKCAGSSVFLKRKWGLGYHLSLYKNEISDP
EQITSFINHHISDAKLKLENKEKLVFTLPLESTSKFPDLFSDIDKCSGQGMMSYDISMST
LNEVFMNLERKPEIRQDFEQTDKIRDSESPSEMDPACSSLPEVHKSVSDMSLWRMQVCAI
ARLRFLNLKRGRKTLLTLLLVFGIALFPLIMERVANSLINESANWEFKTELYFLSSGQLP
QEPRTSLLIINNTESNIEDFIQSLKHQNILLEVDDFENRNGTEGLSYNGAIIVSGKQKDY
RFSIVCNTKRLHCFPILMNIISNGLLWMLNYTQYIRIERSPFNLNHLYIWTGLPDGAPFI
FFIVCCLSPYIAMSSVTDNKKKASSQLWISGLYPSAYWCGQALVDVNLFNLILLLMYLII
YIANKMGISVTSQGIFAMVVVSLGYSASLIFLTYVISFIFRKRRKNSGLWSFCFYVVLTV
MPYIILISDFNITVIIVSMVLLPSSTLEVFLLFLSKRAQEYHEEFQEFKFHLSAVDLLVC
LIPYIQALLLVFILRCMELKCGQKVMRKDPVFRISPQIQNVPLNPEIHVDEDEDEDVQAE
RMRTSSALTTSNVNENPVIIASCLHKEYAGQRKSCFSKRKKKIAARNISFCVKKGEVLGL
LGPNGAGKSSSIRMIAGITKPTAGQVELRVGECKSFLGQQGDDMVKFLGYCPQENVLWPT
LTMKEHLEVYATVKGLQKEDAAIVISRLVNAFNLYEQLNVPVQKLASGTTKKLCFVLSIL
GNSPILLLDEPSTGIDPTGQQQIWQAIQAAVKSTERSVLLTTHYLAEAEALCDRVAIMVS
GRLRCIGSIQHLKRKFGKDYILELKVKEPSQIPLVHTEILNLFPQAAQQERFSSLLTFKL
PIADVYPLSQAFYKLETVKHNFNLEEYSLSQCTLEKVFLELFSRPELGNVDEEVDTTMRW
KLLSYSDEP
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atgagaataaaacagacaagtgtgtatcagcaaactcaagctcttctgtgtaagaatttt
cttaagaaatggaggatgaaaagagagagtgcattggaatggggcctcccaatactgcta
ggactgtatgtgggtctgctttcagaagtcagagaaaataaccaattacctgaaatacct
cctcaagatctgggaagggtagacaaatttaatgtctcttctataatgattgtgtatact
ccagtctctaatataactcagcagataatgaatacaacagcatttgctcccttaatgaaa
ggaacaagaatcattggggtaccaaatgaaaaagacatggatgatgtaattttccagaat
ttcccacatgcagtggggatcacatttagtgacactttctcttacaagttaaaatttttt
caaggatatgctgttccatttttgagagatgatttaacaggtcattgttgggaaatatat
ggtgaatattcatgtgtattgtccaaatactgggaaagaggatttgtgactttgcagact
atcattaatgctgctattatagaagtcacaacaaatcactctgtgatagatgagttgatg
tcagtcactgctataaatatgaagacattaccttttatttctaaagacatttttcaaagt
gagatgttcattttatactgtttgctttatttttccccatttatatattttgtatcacat
aatgttacaaaagagaggaaaaagagtaaggaactgatgaaaatgatgggtctacatgat
tcagctttctggttgtcctggggtttaatgtatactgcattcatcttggtcctttccata
gtcattacaattatcataacatccacccaagttatactcatgactggctttatggtcata
tttacactcttattcttatatggcttgtctttgctagctctatcattcctgatgagtgtg
ctgttacagaaagctgtcctcacaaatttgtttgtgtttctcctcaccctcttttggggg
tttgtgggattcactgccttctataaacaacttcctccatctgtacagtggattttgagt
atttgtagccctttcgcctttagagttggaatgactcagattctccacctggattataac
ttgaatggagtagttttccctgacccctcagaaaaatcatatacaatgctagcaacattt
tctgtgttggcttttgatggtcttatctacttgatgctggcactgtactttgacaaaatc
ttaccctatggaaatgagcaccgctattctccattatttttcctgagttcatcatcttgt
ttccgacaccgaaggactgataatagggtcattgagaaagacctggatcccgagcatccc
tctgatggttattttgaacccatagcttctgaattccaaggaaaagaagccatcaggatt
agaaacgttaaaaaggaatataaaacaaagtctggacaagtgaaagctttgaaaggcgtg
ctctttgacatatatgaaggtcagatcacagcaattttgggtcacagtggagctggcaaa
tcttcactcctaaacatccttaatggattgtctgttccaacagaaggatcagttaccatc
tataataaaaacctctctgaaatgcaagacttggaggaaatcagacagataactggtgtt
tgtcctcaaaataatgttcaaatcgacatgctcactgtgaaggaaaaccttagcctgttt
gctaagataaaagggattcggccgcaggaagtggaacaagaggtacaacaaattttattg
gaattggacatgcaaaatattcaggataatcttgctatacatttaagtgacggacagaaa
agaatgctgacctttgggattgccattttaggagatcctcaagttttgcttttagatgaa
ccaactgctggattagatcccttttcaaggcaccaagtgtggactttcctgaaggaacgt
agagtgaatcgtgtgatcctcttcagtacccagtccatggaggaagctgacattctagct
gatagaaaagtgatcatgtccaatggggagctgaagtgtgcaggatcttctgtcttttta
aagagaaaatggggtcttggatatcacttaagtttgtataagaatgagataagtgatcca
gaacaaatcacatctttcattaatcatcatatctctgatgctaaattaaaactagaaaac
aaagaaaaacttgtatttactttgcctttggaaagcacaagtaaatttccagaccttttc
agtgatattgataagtgttctggccagggtatgatgagttatgacatctccatgtcaact
ctgaatgaggtcttcatgaacctggaacgaaaaccagagatcagacaagattttgaacaa
acagacaagataagagactcagaaagcccaagtgaaatggatccagcttgctcttctctc
cctgaagtacacaagtctgtgagcgacatgagcctctggagaatgcaagtctgtgcgata
gcacggctccgttttttaaatctgaaacgtggaagaaaaacacttttgaccctgctattg
gtttttggaattgcactgtttcctttgattatggaaagggtagcaaattctctgataaat
gaaagtgcaaactgggagtttaaaacggaattatatttcctctcttctggacaacttcct
caggaacctcgtaccagcctcttgatcatcaataacacagaatcaaatattgaagatttt
atacagtctttgaagcatcaaaatatacttttggaagtagatgactttgaaaacagaaat
ggcactgaaggcctctcatacaatggtgctatcatagtttctggtaaacaaaaggattat
agattttcaatcgtgtgtaataccaagaggctgcactgttttcctatcctcatgaatatt
atcagcaatgggctactttggatgcttaattatacacagtatattcgaattgagagaagt
ccatttaatctgaaccatctgtacatctggactgggttgccggatggtgctccattcata
ttttttattgtgtgctgcctttctccttacatcgccatgagcagtgtcactgataacaaa
aagaaagctagttctcagctgtggatttcaggcctctacccctctgcttactggtgtgga
caggcactggtggatgttaacctcttcaatttaattctccttttaatgtatttaatcatc
tacatagcaaacaaaatgggcatttctgttacaagtcaaggtatatttgctatggttgtt
gtatcacttggttattcagcttctcttatcttcctgacatatgtgatatcatttattttt
cgaaagaggagaaaaaacagtggcctctggtcattttgcttctatgttgtcttgacggtc
atgccttacatcattttaatcagtgacttcaacataactgtgatcattgtcagcatggta
ttacttccatcatctactttggaagtatttctactcttcctgtcaaagagagcacaggaa
taccatgaagaatttcaagaattcaaatttcacctgagtgctgttgatcttctagtgtgc
ctaataccttatatccaggctttgctattggtgtttattctaagatgcatggaactaaaa
tgtggacagaaagtaatgcgaaaagatcctgttttcagaatctccccacaaattcaaaat
gttccacttaatccagaaatacatgtagatgaagatgaagatgaagatgttcaagcagaa
agaatgagaacatcaagtgccctgaccacttcaaacgtaaatgagaatccagtaataatt
gccagctgtctacacaaagagtatgcaggccagaggaaaagttgcttttcaaagaggaag
aagaaaatagcagcaagaaatatctctttctgtgtgaaaaaaggtgaagttttgggattg
ctaggacccaatggtgctggtaaaagttcttctattaggatgatagctgggatcacaaag
ccaacagcaggacaggtggaactgagagttggggaatgcaagtcatttctgggtcagcag
ggagatgacatggtcaagttcctggggtactgtcctcaggagaatgtgctgtggcccacc
ctgacaatgaaggaacacctggaggtgtatgccaccgtgaaagggctgcagaaagaggat
gctgccattgtcatttcacgactagtgaatgctttcaacctgtatgagcagctaaatgtt
ccagtgcagaaattagcatcaggaaccacgaaaaagctatgttttgtgctgagcatcctg
ggaaattcgcccatcttgcttctggatgaaccctctacaggcatagatccaacagggcag
caacagatttggcaggcaatccaggcagctgttaagagcactgagaggagtgtcctcttg
accacccattacctggctgaggctgaggctctgtgtgaccgtgtggccatcatggtctct
ggaaggctgagatgcattggttccatccaacacctgaaaagaaaatttggcaaagattac
attctagaactcaaagtgaaggagccttctcaaatacctttggtccacaccgagattctg
aatcttttcccccaggctgcgcagcaggaaaggttttcttccttgttgacctttaagctg
cccatagcagatgtttaccctctatctcaggccttttacaaattagaaacagttaaacat
aactttaacctggaggaatatagcctctctcagtgcacgctggaaaaggtattcctggaa
ctttttagtaggccagaactgggaaatgttgatgaagaagttgatacaaccatgagatgg
aaacttctttcttattcagatgaaccctaa
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integrated database retrieval system
