Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101961666
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Entry
101961666 CDS
T10664
Symbol
Nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
iti03009
]
101961666 (Nop2)
Enzymes [BR:
iti01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
101961666 (Nop2)
Ribosome biogenesis [BR:
iti03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
101961666 (Nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
FtsJ
Methyltransf_31
PCMT
Methyltransf_25
NOP2_rpt
Motif
Other DBs
NCBI-GeneID:
101961666
NCBI-ProteinID:
XP_005338401
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MGRKLDPTKEKRGPGRKARKQKGAETELVRFLPAAGDENSKRLSSRARKRAAKRRFGSVE
VLKTYKSSGAKPLSGKLPKGVVQTPDKKGAQSLFNVGRGKKHLAPDHSSDEEEDEEVSEE
DGVVNQGNLWDSEDSDTDMVDDYGADSNSEDEGEKLLPIERAAQKQKAQEAAVGGQWSEE
TDEEEEGEVSPLSGPTKDEEADGGLQINVDGEELFVLPPAGEMEQDAHAPDLQRVHKRIQ
DIVGVLRDFGAQREEGRSRSEYLNRLQKDLATYYSYGDFLLGKLMELFPLSELIEFLEAN
EVPRPITLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVIYDSSVPIGATPEYLAG
HYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILANDANAVRLKS
VVGNLHRLGVTNTIISHYDGRQFPKVVGGFDRVLLDAPCSGTGVISKDPAVKTNKDEKDI
LRCAHLQKELLLSAIDSVNATSKTGGYLVYCTCSIMVEENEWVVDYALKKRNVRLVPTGL
DFGQEGFTRFRERRFHPTLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQTGNSATATP
VDLDLPDPKSQVTPKSEKNSQPAKKAKRAAKAKQFQKRQHPKNTSAQKLNGITKGTVSEV
STVPSVTKAQASSRLPDSTRPAGKVEVIRKPKVIGRLRQQAPKLHSSKKAAFLKQNAPPK
SMDTESPVTLSLSQTQATPRLKDTDQPLGKVKGAEKVKQPFKKATFQKENGTPKGSQIPT
VTPLNSVQPPPAKRRKTVPKGNSQPLLA
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcaagttggatcctacgaaggagaagcgtggtccaggccgaaaggctagaaaa
caaaaaggtgctgagacagaactggtcaggtttttgcctgcagctggtgatgaaaattcc
aagaggctgtctagtcgtgctcgaaagagagcagccaagaggaggtttgggtctgttgaa
gtccttaaaacttataagtcttctggggccaaaccgttgtctggaaagctaccaaaagga
gtggttcagacacctgataagaagggtgctcagtccttatttaatgttggtcgaggcaag
aaacacctagcaccagaccatagtagtgatgaggaagaggatgaggaagtctctgaagaa
gatggtgttgtgaaccaggggaacctctgggattctgaggacagtgatactgatatggta
gatgactatggagctgattccaactcagaggatgaaggtgaaaagttgttgcctattgaa
agagctgctcagaagcagaaggctcaggaagctgctgttgggggccagtggagtgaggag
actgatgaagaggaagagggggaagtgtcccctctgtcaggccccacaaaggatgaggag
gcagatgggggcctgcagatcaatgtggatggggaagagctgtttgtgctgccccctgct
ggggagatggagcaggatgcccatgctccagacttgcaacgagttcacaagcggattcag
gatatagtgggagtgttgcgggattttggggctcagcgggaagaaggtcggtctcgttct
gaatatcttaatcggcttcagaaggatctggccacgtattactcctatggagacttcctg
cttggcaagctcatggaactcttccctctgtctgagctgatagaatttttagaagctaat
gaggtgcctcggcccatcaccctccggaccaataccttgaaaacccggcgtagagacctt
gctcaggctctgatcaatcgtggggttaacttggatcccttgggcaagtggtcaaagact
ggactcgttatatatgattcttcagtgcccattggtgctactcctgaatacctggctgga
cactacatgttgcagggagcctccagcatgttgcctgtcatggccttggcgccgcaggaa
catgagcggatcttggacatgtgttgtgcccctggaggaaagaccagctacatagcccaa
ctgatgaaaaacactggtgtgatccttgccaatgatgccaatgctgtgcggctaaagagt
gttgtgggtaacctgcaccggctgggagtcactaacaccatcattagccactatgatgga
cgccagttccccaaggtggttgggggctttgacagagtattgctggatgctccctgtagt
ggcactggggtcatctctaaggatccagctgtgaagactaacaaggatgagaaggacatc
ctgcgctgtgctcaccttcagaaagagttactcctgagtgctattgactctgtcaatgcc
acttctaagacaggaggctacctcgtctactgcacctgttctattatggtggaagagaat
gagtgggtagtagactatgccctgaaaaagagaaatgtgaggcttgtgcccactggtctg
gactttggccaggaaggttttacccgttttcgagaaaggcgtttccatcccactctgcgt
tccacccgacgattttaccctcatacccacaatatggatggtttctttattgccaagttc
aagaaattctccaattctatccctcagtcccaaacaggaaattctgcaacagccactcct
gtagacctagacttgcctgacccaaagagtcaggttactcccaagtctgagaagaacagc
caaccagccaagaaagccaaaagggctgcaaaggcaaagcagttccagaaacggcagcat
cccaagaacacctctgcacagaagctgaatggtatcaccaaaggcacagtctcagaagtg
tccactgtaccttctgtcacaaaggcccaagcttcctccaggctcccagatagcactcgg
cctgctggaaaagttgaagtgatcaggaaaccaaaggtgattgggaggctaaggcaacag
gcacctaagttgcactcctctaagaaagctgccttcctgaagcagaatgcccctcccaaa
agcatggacacagaatcacctgttacactgtccctttctcagactcaggctacccccaga
cttaaggacactgatcagccccttggaaaagtaaaaggggccgagaaggtaaagcagcct
ttcaagaaagctacctttcagaaggagaatggtacccccaagggatctcagatccctact
gtgactcccctcaattctgtccagcccccaccagcaaagaggaggaaaactgtgcctaag
ggcaatagccagccactgctggcttag
DBGET
integrated database retrieval system
