Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101961820
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Entry
101961820 CDS
T10664
Symbol
Cdh4
Name
(RefSeq) cadherin-4
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101961820 (Cdh4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iti04515
]
101961820 (Cdh4)
Cell adhesion molecules [BR:
iti04515
]
Cadherins
Major cadherins
101961820 (Cdh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Stevor
DUF4690
DUF5527
Motif
Other DBs
NCBI-GeneID:
101961820
NCBI-ProteinID:
XP_040131384
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MLVRLHSVNLILFNVSPLSSQAQEDLTARETCKAGFSEEGYTALISPDILQGERLLKVEF
SSCLGSQGTQYETNSLDFKVGADGTVYATRELRIPSEQVAFTVTARDRRTAEQWDAVVRL
LVAQTRSSHPGHKRGKKKDMTLDPSQPPRDTLLPWPPHQRSGGLRRQKRDWVIPPINVPE
NSRGPFPQQLVRIRSDKDNDIPIRYSITGVGADQPPMEVFSIDSMSGRMYVTRPMDREER
ASYHLRAHAVDMNGNKVENPIDLYIYVIDMNDNRPEFLNQVYNGSVDEGSKPGTYVMTVT
ANDADDGTTANGMVRYRIVTQTPQSPSQNMFTINSETGDIVTVAAGLDREKVQQYTVIVQ
ATDMEGNLNYGLSNTATAIITVTDVNDNPPEFTASTFAGEVPENRVETVVANLTVMDRDQ
PHSANWNAVYRIISGDPSGHFSVRTDPVTNEGMVTVVKAADYELNRAFMLTVMVSNQAAL
ASGIQMSFQSTAGVTISVTDINEAPYFPSNHKLIRLEEGVPAGTALTTFSAVDPDRFMQQ
AVRWVCSSRCPPVSCFLPCPSALWPGVRALLTGRKRRRASNSWTGSEGRPRAPCRALAAP
EGSRVPRAQLSYRALLWLVRGGCAGEPVCAALGPVWPWLPASGGCGAAGGLGCVCLRACV
SGVLWAAACALSWWGLIPGGLAPRGHHTCPSGIPPASGTGTLQIYLIDINDNAPELLPKE
AQICEKPGLNAINITAADADVDPNVGPYVFELPFVPATVRKNWTITRLNGDYAQLSLRIL
YLEAGMYDVPITVTDSGNPPLSNTSVIKVKVCPCDENGDCTTVGAVAAAGLGTGAIVAIL
ICIILLLTMVLLFVVWMKRREKERHTKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQ
LQQPEALEHVLSKAPGVRRVDERPVGAEPQYPARPVVPHPGDIGDFINEGLRAADNDPTA
PPYDSLLVFDYEGSGSTAGSVSSLGSSSSGDQDYDYLNDWGPRFKKLADMYGGGEED
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgttggttaggctgcattctgtgaacttaattctgttcaatgtgtctcctctgtcttct
caggcccaggaggatcttacagccagggagacctgcaaggctggattctcagaagaaggt
tacacggcattaatctccccagatattctgcaaggagagaggctgctcaaagttgagttc
agcagctgtctggggagccaggggacgcagtatgagaccaacagcctggacttcaaggtc
ggggcagacgggacagtctacgccacccgggagctgcgcatcccctctgagcaggtggcc
ttcacagtgaccgcaagggaccgccggacggctgagcaatgggacgccgtggtgcggctg
ctggtggcccagacccggtcctcgcaccctggacacaagagaggaaagaagaaagacatg
accctggacccctcccagcccccaagggacacgctgctgccctggcctccgcaccagcgc
tccggggggctgaggcggcagaagcgagactgggtcatcccccccatcaacgtgccggag
aactcgcgcgggcccttcccgcagcagctcgtgaggatccggtctgacaaagacaacgac
attcccattcggtacagcatcacgggcgtgggcgccgaccagccgcccatggaggtcttc
agcatcgactccatgtccggacgcatgtacgtcacgaggcccatggaccgggaggagcga
gcctcttaccacctccgggcccacgccgtggacatgaatggcaacaaggtggagaacccc
atcgacctgtacatctacgtcatcgacatgaatgacaaccgccccgagttcctgaaccag
gtctacaacggctctgtggacgagggctccaagccaggcacctacgtgatgacagtcaca
gccaatgacgcagacgacggcaccacggccaacggcatggtgcggtaccggattgtgacc
cagacccctcagagcccatcccagaacatgttcaccatcaacagcgagacaggggacatc
gtgacggtggcagcaggcctggaccgagagaaagtgcagcagtacacggtcatcgtgcag
gccaccgacatggaaggcaacctcaactacgggctctcaaacacggccacggccatcatc
acggtgacagacgtgaacgacaacccccccgaattcaccgcgagcacatttgcaggggag
gtccctgaaaaccgggtagagacggtggtcgccaacctcaccgtgatggaccgggaccag
ccccactcggcaaactggaacgccgtctaccgcatcatcagcggggacccgtcggggcac
ttcagcgtccgcacagaccctgtcaccaacgagggcatggtcaccgtggtgaaggccgca
gactacgagctgaacagggccttcatgctgacggtgatggtgtccaaccaggcggccctg
gccagcgggatccagatgtccttccagtccacggcaggggtgaccatctcggtcaccgac
atcaacgaggcgccctacttcccgtccaaccacaagctcatccgcctggaggagggcgtg
ccggcgggcaccgcgctcaccaccttctccgccgtggaccctgaccgcttcatgcagcaa
gccgtgaggtgggtctgcagcagccgctgccccccggtctcctgttttctaccctgccct
tctgcactgtggccaggtgtcagagccctgctgacaggcaggaaacgcaggagagccagc
aacagctggacagggtcagagggcaggcctcgggcaccttgcagagccctggcagcccca
gaaggaagcagggtccccagggcacagctgagctatcgggcactcctgtggctggtcagg
ggagggtgtgcgggagagcctgtgtgcgctgccctggggcctgtgtggccctggcttccc
gcaagtggagggtgtggtgcagctggggggctgggctgcgtctgcctgagggcctgcgtc
tctggtgtgctgtgggcggctgcctgtgcgctgtcctggtggggcctgatcccaggtggc
ctggccccccgtggtcaccacacctgtccttcagggatccccccggccagcggcactggg
actctgcagatctacctcatcgacatcaacgacaacgcgcccgagctgctgcccaaggag
gcacagatctgcgagaagccaggcctcaacgccatcaacatcaccgcggccgacgccgac
gtggaccccaacgtcggcccctacgtcttcgagctgcccttcgtccccgccacggtgcgg
aagaactggaccatcacccgcctcaacggtgactacgcccagctgagcctgcgcatcctg
tacctggaggcggggatgtacgatgtccctatcaccgtcaccgactccgggaaccccccc
ctgtccaacacctccgtcatcaaggtcaaggtgtgcccgtgtgacgagaacggtgactgc
accactgtgggcgccgtggcagcagccgggctgggcacaggcgccatcgtggccatcctc
atctgcatcatcctcctgctgaccatggtcctgctgtttgtggtgtggatgaagcggcgg
gagaaggagcgacacaccaagcagctgctcatcgaccccgaggacgacgtgcgggacaac
atcctcaagtacgacgaggagggcggaggcgaggaggaccaggactatgacctcagccag
ctgcagcagccggaagccctggagcacgtgctgagcaaggcccctggagtgcggcgggtg
gacgagcggccggtgggcgctgagccccagtacccagccaggcctgtggtaccccaccca
ggtgacatcggggacttcatcaacgagggactgcgcgccgctgacaatgaccccaccgca
ccgccctacgactccctgctggtcttcgactacgagggcagcggctccaccgcgggctcc
gtcagctccctgggctcgtccagctcgggggaccaagactacgactacctgaacgactgg
gggccccgcttcaagaagctggccgacatgtacgggggcggcgaggaggactag
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