Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101961824
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Entry
101961824 CDS
T10664
Symbol
Trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X6
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101961824 (Trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101961824 (Trip12)
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101961824 (Trip12)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
HECT type E3
101961824 (Trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
101961824
NCBI-ProteinID:
XP_005326509
LinkDB
All DBs
Position
Unknown
AA seq
2040 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSHLGQAKHKRYSPPESRKSNSKAPKVQ
SNTTSELSRGHLSKRSCSSSSAVIVPQPEDPDRANTSERQKTGQVPKKDNSRGVKRSASP
DYNRTSSPSSAKKPKALEHTESPSETSKSHSKSKKRHLDQEQQLKSAQLPSTSKAHTRKS
VAAGSSRSQKRKRTESSCGKSGSGSESTGAEERSAKPTKLASKSATSAKAGCSTITDSSS
AASTSSSSSAVASASSTVPPGARVKQGKDQNKARRSRSASSPSPRRSSREKEQSKTGGSS
KFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELP
SLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPESNQETVNSSAARTDEAPQ
GAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIG
SGASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQME
HNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRR
HSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLT
HQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTPPILSSGMFIMVV
RMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLIC
ELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEQINEDTGT
ARAIQRKPNPLANTNTSGYSELKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGP
AVRHKCLRAILRIIYFADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQK
LPDIFSVYFRREGVMHQVKHLAESESLLTSPPKACTNGSGSLGSTTSVSSGTATAATNAT
ADLGSPSLQHSRDDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPT
TTQSPKSSFLASLNPKTWGRLSAQSNSNNIEPARTAGVSGLARAASKDTISNNREKIKGW
IKEQAHKFVERYFSSENMDGSNPALNVLQRLCAATEQLNLQVDGGAECLVEIRSIVSESD
VSSFEIQHSGFVKQLLLYLTSKSEKDAVSREIRLKRFLHVFFSSPLPGEEPIGRVEPVGN
APLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTGGSFSLNRGSQALKFFNTHQLKCQLQR
HPDCANVKQWKGGPVKIDPLALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEIDESLAA
QFLNSGNVRHRLQFYIGEHLLPYNMTVYQAVRQFSIQAEDERESTDDESNPLGRAGIWTK
THTIWYKPVREDEESNKDCVGGKRGRAQTAPTKTSPRNAKKHDELWHDGVCPSVSNPLEV
YLIPTPPENITFEDPSLDVILLLRVLHAISRYWYYLYDNAMCKEIIPTSEFINSKLTAKA
NRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEI
NQSDSQDSRVAPRLDRKKRTVNREELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTL
EFYALVSQELQRADLGLWRGEEVTLSNPKGSQEGTKYIQNLQGLFALPFGRTAKPAHIAK
VKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFDIDPVVARSVYHL
EDIVRQKKRLEQDKSQTKESLQYALETLTMNGCSVEDLGLDFTLPGFPNIELKKGGKDIP
VTIYNLEEYLRLVIFWALNEGVSRQFDSFRDGFESVFPLSHLQYFYPEELDQLLCGSKAD
TWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSL
NPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIMRDKLLIAAREGQQSFHLS
NT seq
6123 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgactcaataggaggaaggtcacatttagggcaggcaaaa
cataagagatatagccctcctgagagtagaaaatctaattctaaggcacccaaagtgcag
tctaatactacttctgaactgtcaaggggacacctttctaaaagaagctgcagttcatca
tctgctgtcatagtcccacaaccagaggatccagacagagccaatacttcagaaaggcaa
aaaacggggcaggtgcctaagaaagacaattctcgaggagtgaaacgcagtgctagtcca
gattacaacaggaccagttctcctagctctgcgaaaaaacccaaagcacttgagcatact
gagtctccctcagaaacgagtaaatcacatagtaagtcaaagaagagacatttagaccag
gagcaacaactgaaatctgcacaattgccatcaacaagcaaggctcacaccagaaagagt
gtggccgctggcagttcacggagtcaaaaaagaaaaaggacagagagttcttgtggaaag
agtggttctgggtccgaatcaactggtgcggaagagagatctgcaaaacctaccaagctg
gcttcaaaatcagccacctcagccaaagctgggtgtagcaccatcactgattcttcctct
gctgcctctacttcctcctcgtcctctgctgtagcctcggcctcttccactgtaccacca
ggtgccagggtgaaacaaggaaaagaccagaacaaggctaggcgttcccgttcagcatcc
agtcccagtcccagaagaagtagcagagaaaaggaacagagtaaaactggtggctcttca
aaatttgattgggctgctcgtttcagccctaaagttagccttcctaaaacaaaactgtct
cttccagggtcttctaagtcagagacatcaaaacctggaccttctggattacaggccaaa
ttagcaagtttaagaaaatctaccaagaagcgcagtgagtccccacctgctgagctcccc
agtttgaggcggagcacacgccaaaagaccacgggctcctgtgctagtaccagtcggcga
ggctctggcctgggcaaaagaggagcagctgaggctcggaggcaggagaaaatggcagac
cctgaaagcaaccaggagacagtaaattcttcagctgctcggacagatgaagctccccaa
ggagctgcagcctctagttctgttgcaggggctgttggcatgaccacctctggggagagt
gaatcagatgattccgagatgggacgattacaagctctgttagaggccaggggtcttcct
cctcacctgtttggtcctcttggtcctcggatgtcacaacttttccatagaacaattgga
agcggagctagttctaaggcccagcagcttcttcaaggactacaagccagtgatgaaagt
cagcagcttcaggcagtgattgaaatgtgccagctgttggtcatgggaaatgaggagaca
ctgggggggtttcctgttaagagtgtcgttccagctttgataacattactgcagatggag
cataattttgatattatgaaccatgcttgccgagccttaacgtacatgatggaagcactt
cctcggtcgtctgctgtcgttgtggatgctattcctgtctttttagaaaagctgcaagtt
attcagtgtattgacgtggcagagcaggccttgactgccttggagatgttgtcacggaga
cacagtaaagccattctacaggcaggtggtttggcagactgcttgctgtatctagagttc
ttcagcataaatgcccaaagaaatgcactagcaattgcagccaattgctgtcagagtatc
acaccagatgaatttcattttgtggcagattccctcccattgctaacccaaaggctaacc
catcaggacaaaaaatcagtagaaagtacttgcctttgttttgcacgtctcgtggacaac
ttccaacatgaggagaatttactccagcaggttgcttccaaagatctgcttacaaatgtt
caacaactgttggttgtgactccaccaattttaagttctgggatgtttataatggtagtt
cgcatgttttctctgatgtgttccaactgtccaacattagctgttcaacttatgaagcaa
aatattgcagaaactcttcacttcctgctgtgtggtgcctccaatggaagctgtcaagag
caaattgatcttgttccacggagtcctcaagaactatatgaactgacatccctgatttgt
gaacttatgccatgtttaccaaaagaaggcatttttgcagttgataccatgttgaagaag
ggaaatgcacagaacacagatggtgcgatatggcagtggcgagatgaccggggcctctgg
catccctataacaggattgacagccggatcattgagcaaatcaatgaggacacgggaaca
gcacgtgccattcagagaaaacctaacccattagccaatactaacactagtggatattca
gagttaaagaaggatgatgctcgagcacagcttatgaaagaggatccggaactggctaag
tcttttattaagacattatttggtgttctttatgaagtgtatagttcctcagcaggacct
gcggtcagacataagtgccttagagcaattcttagaataatttattttgcggatgccgaa
cttctgaaggatgttctgaaaaatcatgctgtttcaagtcacattgcttccatgctatca
agccaagacctgaagatagtagttggagcacttcagatggcagaaatattaatgcagaaa
ttacctgatatttttagtgtttacttcagaagagaaggtgtaatgcatcaagttaaacat
ttagcggaatcagagtctttgttgacaagtccaccaaaggcgtgtacgaatgggtcagga
tctttggggtccacaacatcagtcagcagtggaacagccacagctgccactaatgccacc
gctgatttgggatctcccagcttgcagcacagcagagatgattctttagatctaagccct
caaggtcgattaagtgatgttctgaagagaaaacgactgccaaaacgagggccaagaagg
ccaaagtactcacctccaagagatgatgacaaagtagacaatcaagctaaaagccccact
actactcagtcacctaaatcatctttcctggcaagcttgaatccaaaaacatggggaagg
ttaagcgcacagtccaacagtaacaacattgagcccgctcgaactgcaggagttagtggt
cttgccagagctgcctcaaaggacacaatatccaataatagagaaaaaattaaaggttgg
attaaggagcaggcacataaatttgtagagcgttattttagttctgagaatatggatgga
agcaaccctgcactgaatgtccttcagagactttgtgctgcaactgaacaactcaacctc
caggtggatggtggagctgagtgccttgtagaaatccgtagcatagtctcagaatcagat
gtttcgtcatttgaaatccagcatagtggattcgtgaagcagctgttgctatatttgaca
tctaaaagtgaaaaggatgctgtgagcagagagatcagattaaagagattccttcatgta
tttttttcttctccacttcctggagaagagcccattggaagagtagaaccagtgggtaat
gcacctttgctggcattagttcacaagatgaacaactgcctcagccagatggaacaattt
ccagtcaaagtgcatgatttccctagtggaaatgggacaggcggcagcttttctctcaac
agaggatcacaggctttaaaatttttcaacacacatcagttgaaatgccaattacaaaga
catcctgactgtgcaaatgtgaagcagtggaagggtggacctgtcaagattgaccctctg
gctttggtacaagctattgagagataccttgtagttagagggtatggaagagtaagagaa
gatgatgaagacagcgatgatgatggatcagatgaggaaatagacgagtctctggctgct
cagttcttaaattcaggaaatgtaagacacaggctacagttttacattggagaacatttg
ctaccatataacatgactgtgtatcaggcagtacggcaattcagtatacaggctgaagat
gaaagggagtccacggatgatgagagcaatcctctagggagagctggtatttggacaaag
actcatacaatatggtacaaacctgtgagagaagatgaagaaagtaataaagattgtgtt
ggtggtaaaagaggaagagcccaaacagctccaacaaaaacttcccctagaaatgcaaaa
aagcacgatgagttgtggcatgatggagtttgcccatcagtatcaaatcctttagaagtt
tacctcattcccacaccacctgaaaatataacctttgaagacccatcattagatgtgatc
cttcttctaagagttttacatgccatcagtcgatactggtattatttgtatgataatgcg
atgtgcaaggagattattccaactagtgaatttattaacagtaagttgacagcaaaagca
aataggcagcttcaagatcccttagtaatcatgacaggaaacatcccaacatggcttact
gagctaggaaaaacctgcccatttttctttccttttgatacccggcaaatgcttttttat
gtaactgcatttgatcgggaccgggcaatgcaaagattacttgataccaacccagaaatc
aaccagtctgattctcaagatagcagagttgctcctagattggataggaaaaaacgaact
gtgaacagagaggagctgttgaaacaagctgagtctgtaatgcaggacctgggcagttca
cgggccatgttagaaatccaatatgaaaatgaggttggtactggtcttgggcctacactg
gagttttatgcacttgtatctcaggaactacagagagctgacttgggtctctggagaggt
gaagaagtaactcttagcaatccaaaaggaagccaagaagggaccaagtatattcaaaac
ctccagggcctgtttgcgcttccctttggtaggacagctaagccagctcatatcgcaaag
gttaagatgaagtttcgcttcttaggaaaattaatggctaaggctatcatggatttcaga
ttggtggaccttcccctcggcttacccttttataagtggatgctacggcaagaaacttca
ttaacatcacacgatttgtttgacatagaccctgttgtagccagatcggtatatcaccta
gaagacattgtcagacagaagaaaagactggaacaggataaatcccagaccaaagagagt
ctacaatatgcattagaaacccttactatgaatggctgctcagttgaagatctaggattg
gatttcacactaccagggtttcccaacatcgaactgaagaaaggagggaaggatatacca
gtcactatctacaatttagaggagtatctaagactggtaatattctgggcactaaatgaa
ggcgtttctagacaatttgattcgttcagagatggatttgaatcagttttcccactcagt
catcttcagtacttctacccagaggaactggatcagctcctatgtggcagtaaagcagac
acttgggatgcaaagaccttgatggagtgctgcaggcctgaccacggttatacacatgac
agtcgggctgtgaagttcttatttgagattctcagtagttttgataatgagcagcagagg
ttgtttctccagtttgtgactggaagcccacgattgcctgttggaggattccggagtctg
aacccacctttgacaattgtccggaaaacatttgagtcaacagaaaacccagatgacttc
ttaccctctgtaatgacttgtgtgaactatcttaagttgccggactattcaagcattgag
ataatgcgtgacaaactgttgatagcagcaagagaagggcagcagtcattccatctctcc
tga
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integrated database retrieval system
