Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101961843
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Entry
101961843 CDS
T10664
Symbol
Xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
101961843 (Xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iti03400
]
101961843 (Xrcc5)
DNA repair and recombination proteins [BR:
iti03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
101961843 (Xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
Motif
Other DBs
NCBI-GeneID:
101961843
NCBI-ProteinID:
XP_005331894
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MAWSGNKAAVVLCMDVGFAMSNSCPGEESPFEQAKKVMTMFVQRQVFAESKNEIALVLFG
TDGTENALAAGDQYQNITVHRHLMLPDFDLLEDIESRIQPGSQQADFLDALIVCMDVIQN
ETVGKKFEKKHIEVFTDLNSPFSKDQLDIIIHNLKKSGISLQFFLPFPIAKINGTGDRGD
GSLYLDDRGPSFPQKGITEQQKEGIQMVKNVMMSLEGEDGLDEIYSFRESLRQLCVFKKI
ERRSMPWSCQLTIGSNLSIKIVAYKSITLEQIKKTWMVVDARTLKKEDIQKETVYCLNDD
DETEVPKEDTIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCRSSQVQRKFFMGSQ
VLKVFAAKGDKAAAVALSSLVHALDELDMVAVVRYVYDRRANPQVGVAFPYIKDAYECLV
YVQLPFMEDLRQYMFSSLKNNKKFTPTEAQLSAVDALIDSMSLVKEDKEEDTIEDLFPTT
KIPNPAFQRLFQCLLHRALHPQEPLPPIQQHILNMLEPPTEVTAKCQIPLSKIKNLFPLT
EAIKKKDHVTAQDIFQDNHEEGPTAKKCKTEEGEAHFSVSGLAEVNITKVGSVNPVENFR
ALVRQKNASFEEACHQLISHIEQFLDTNETPYFMKSMDCIKAFREEAIQFSEEQHFNSFM
KSLREKVEVKQLNHFWDIVVQDGITLITKDEASGSSVTAEEAKKFLAPKEKPHEDKAAMF
EEGGDVDDLLDMM
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtccggaaataaggcagctgttgtgctatgtatggatgtgggctttgctatg
agtaactcctgtcctggtgaagaatctccttttgaacaagcaaagaaagtgatgaccatg
tttgtccaacgacaggtgtttgctgagagcaagaatgagattgctttggtcctgtttggt
acagatggcactgagaatgcccttgctgctggggaccagtatcagaacatcacagtacac
agacacctgatgctaccagattttgatttgctagaggacattgaaagccgaatccaacca
ggttctcaacaagctgacttcctggatgccctgattgtgtgcatggatgtgattcagaat
gaaactgtaggaaagaagtttgagaagaagcatattgaagtgttcactgacctcaacagc
ccattcagcaaagatcagctagatattataattcataacttgaagaaatctggcatctcc
ctccagttctttttgcccttcccaattgccaagataaatggtactggggacagaggagat
ggcagcttgtacttagatgatcgtggaccctcctttcctcaaaaaggtattactgagcag
caaaaagaaggcattcagatggtgaaaaatgtgatgatgtctttagaaggtgaagatggg
ctggatgaaatttattccttccgtgagagtctgagacaactatgtgtctttaagaaaatt
gagaggcgttccatgccctggtcctgccagctgaccattggctccaatttgtctataaag
atcgtggcctataaatcgattactttggagcaaattaaaaagacttggatggttgtggat
gcaagaaccctaaagaaagaagatatacaaaaagaaacagtttattgcttaaatgatgat
gatgaaactgaagttcccaaagaagatactattcaagggttccgctatggaagcgatata
gttcctttctctaaagtggatgaggaacaaatgaaatacaaatcggaggggaagtgcttc
tctgttttgggattttgtagatcttctcaggtccagagaaaattctttatgggaagtcaa
gttctaaaggtctttgcagcaaaaggtgataaggcggcagcagttgcactttcctccttg
gttcatgccttggatgaattagacatggtggctgtagttcgatacgtttatgacagaaga
gctaatcctcaagttggtgtggcttttccttatatcaaggatgcctatgagtgcttagtg
tatgtgcagctgcctttcatggaagacttgcggcaatatatgttttcatccctgaaaaat
aataagaaatttactcccacagaggcacagttgagtgctgttgatgctttaatcgactct
atgagcttggtaaaggaagacaaggaggaagacaccattgaagacttgtttccaaccacc
aagatcccaaatcctgcatttcagagattatttcagtgtctgctgcacagagctttacat
cctcaagagcctctgcccccaattcagcaacatattttgaatatgctagagccccccact
gaagtgacagcaaaatgtcagattcctctctctaaaataaagaaccttttccctctgact
gaagccatcaagaaaaaggatcacgtaactgctcaggacattttccaagacaaccatgaa
gagggtcccactgctaaaaaatgtaagactgaggaaggggaagcccacttcagtgtttca
ggcttggctgaagtcaatatcacaaaggttggaagtgtgaatcctgttgaaaacttccgt
gctctagtgagacagaagaatgccagctttgaggaagcatgtcatcagctaataagtcac
attgaacagtttttggatactaacgaaacaccatattttatgaagagcatggactgcatc
aaagccttccgggaagaagccattcagttttcagaagaacagcacttcaacagtttcatg
aaatcccttcgagagaaagtggaagttaaacagttaaatcatttctgggacattgttgtt
caggatggaatcactctcatcaccaaagatgaagcctctggaagttctgtcacagctgag
gaagccaaaaagtttctggcccccaaagaaaaaccacatgaagacaaagcagccatgttt
gaagaaggtggtgatgtagatgatttgctggacatgatgtaa
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