Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101961858
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Entry
101961858 CDS
T10664
Symbol
Slc6a5
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2 isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04082
Neuroactive ligand signaling
iti04721
Synaptic vesicle cycle
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
101961858 (Slc6a5)
09150 Organismal Systems
09156 Nervous system
04721 Synaptic vesicle cycle
101961858 (Slc6a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
iti02000
]
101961858 (Slc6a5)
Transporters [BR:
iti02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
101961858 (Slc6a5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
DUF999
Motif
Other DBs
NCBI-GeneID:
101961858
NCBI-ProteinID:
XP_005336015
UniProt:
I3MGZ7
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MDCSASKETNKQPVNSMEAAAQDHRESPCAPRTSPEQELPSAAAVAPPPRVPRSASTGAQ
TFQSEDARVCEAQRPGVGFCKLSSPRAQAASAALPDLSEGYSTQGTPLSGGAGPGNALHC
KIPVLRGPEGDENVSVGKGTLERNNTPSVGWVNMSQSTVVLGTDGIASVLPGSVTTTATQ
EDEQGDENKARGNWSSKLDFILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLMMLALA
GLPIFFLEVSLGQFASQGPVSVWKAIPALQGCGIAMLIISVLIAIYYNVIICYTLFYLFA
SFVSVLPWGSCNNPWNTPECKDKTKLLLDSCVISEHPKIQIKNSTFCMTAYPNLTMVNFT
SQANKTFVSGSEEYFKYFVLKISAGIEYPGEIRWPLAFCLFLAWVIVYASLAKGIKTSGK
VVYFTATFPYVVLVILLIRGVTLPGAGAGIWYFITPKWEKLTDATVWKDAATQIFFSLSA
AWGGLITLSSYNKFHNNCYRDTLIVTCTNSATSIFAGFVIFSVIGFMAHERKVNIENVAD
QGPGIAFVVYPEALTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIVTSISDEFPKYLRT
HKPFFTLGCCICFFIMGFPMITQGGIYMFQLVDTYAASYALVIIAIFELVGISYVYGLQR
FCEDIEMMIGFQPNIFWKVCWAFVTPTILTFILCFSFYQWEPMTYGSYRYPNWSMVLGWL
MLACSVIWIPIMFVIKMYLAPGRFIERLKLVCSPQPDWGPFLAQHRGERYKNMIDPLGTS
SLGLKLPVKDLELGTQC
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggattgcagtgcttccaaggaaacgaataaacaaccagtcaacagcatggaagcggcg
gcccaggaccaccgagagagcccgtgcgcaccaagaacgagcccggagcaggagcttccc
tctgccgccgccgtcgctccaccaccacgagtgcccagatccgcttccaccggcgcccaa
actttccagtccgaggatgcacgagtctgcgaggcccagaggccaggagtggggttttgc
aaactcagtagcccgcgagcgcaggcggcctcagcggcccttccagacttaagcgaaggg
tacagcacgcagggcacccctctttctgggggcgccgggcccggcaacgcgttgcactgt
aagatcccggttctgcgcggcccagagggggatgaaaacgtgagtgtgggcaagggcacg
ttggagcggaacaataccccgtctgtgggctgggtgaacatgagccagagcaccgtggtg
ttgggcacagatgggatcgcatcggtgctcccgggcagcgtgaccactactgccacacag
gaggacgagcaaggggatgagaataaggcccgagggaactggtccagcaaactggacttc
atcctgtccatggtggggtacgcagtggggctgggcaatgtctggaggtttccctacctg
gccttccagaacgggggaggtgctttcctcattccttacttgatgatgctggcactggct
gggttgcccatcttcttcctagaggtgtcactgggccagtttgccagccaggggccagtg
tctgtgtggaaggctatcccagctttacaaggctgtggcatcgcaatgttgatcatctct
gtcctaatagccatatactacaatgtgattatttgctacacacttttctacctgtttgcc
tcctttgtgtctgtgctaccctggggctcctgcaacaacccttggaacacgccagaatgc
aaagataaaaccaaactcttattagattcctgtgtgattagtgagcatcccaaaatacaa
atcaagaactcgactttctgcatgactgcctatcccaacttgacaatggttaacttcacc
agccaggccaacaagacgtttgtcagtgggagtgaagagtacttcaagtacttcgtgctg
aagatttctgctgggattgagtatcctggggagatcaggtggccactagctttctgcctc
ttcctggcttgggtaatagtgtatgcatccctggctaaaggaatcaagacttcaggaaaa
gtggtgtacttcacggccacattcccctatgttgtgctggtgatcctcctcatccgagga
gtcaccctgcctggagctggagctgggatctggtacttcatcacacccaagtgggagaaa
ctcacagatgccacggtgtggaaagatgctgccactcagattttcttctctttatctgcc
gcatggggaggtctgatcactctttcttcttataacaaattccataacaattgctacagg
gacactctaattgtaacctgcaccaacagtgccacaagcatctttgccggcttcgtcatc
ttctccgttatcggcttcatggcccatgaacgcaaagtcaacattgagaatgtggcggac
caagggccaggcatcgcatttgtggtttaccctgaagccttaaccaggctgcccctctct
ccgttctgggccatcatctttttcctgatgctcctcactctcggacttgacaccatgttt
gccaccatcgagaccatagtgacctccatctcggatgagttccccaagtacctgcgcaca
cacaagccgttcttcaccctgggctgctgcatttgtttcttcatcatgggttttcccatg
atcacccagggtgggatttacatgtttcagcttgtggacacgtatgctgcctcctacgcc
ctcgtcatcattgccatatttgagctcgttgggatctcctatgtgtacggcttgcaaaga
ttctgtgaagatatagagatgatgattggattccagcccaacattttctggaaagtctgc
tgggcgtttgtaactccaaccattttaacttttatcctttgcttcagcttttaccagtgg
gagcccatgacctatggatcttaccgctaccctaactggtccatggtgctgggctggcta
atgcttgcctgctctgttatctggatcccaattatgtttgtgataaaaatgtatctggca
cctggcagatttattgagaggctgaagttggtgtgctcgccacagcccgactggggcccg
ttcttggcccaacaccgcggggagcgttacaagaacatgattgaccccttgggcacctct
tccctgggactcaaactgccagtaaaggatttggaactgggcacccagtgctag
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