Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101961975
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Entry
101961975 CDS
T10664
Symbol
Cacnb1
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-1 isoform X2
KO
K04862
voltage-dependent calcium channel beta-1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04010
MAPK signaling pathway
iti04260
Cardiac muscle contraction
iti04261
Adrenergic signaling in cardiomyocytes
iti04921
Oxytocin signaling pathway
iti05410
Hypertrophic cardiomyopathy
iti05412
Arrhythmogenic right ventricular cardiomyopathy
iti05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101961975 (Cacnb1)
09150 Organismal Systems
09152 Endocrine system
04921 Oxytocin signaling pathway
101961975 (Cacnb1)
09153 Circulatory system
04260 Cardiac muscle contraction
101961975 (Cacnb1)
04261 Adrenergic signaling in cardiomyocytes
101961975 (Cacnb1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
101961975 (Cacnb1)
05412 Arrhythmogenic right ventricular cardiomyopathy
101961975 (Cacnb1)
05414 Dilated cardiomyopathy
101961975 (Cacnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
iti04040
]
101961975 (Cacnb1)
Ion channels [BR:
iti04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
101961975 (Cacnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
SH3_2
Motif
Other DBs
NCBI-GeneID:
101961975
NCBI-ProteinID:
XP_005321822
UniProt:
I3MGP4
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MVQKSSMSRGPYPPSQEIPMEVFDPSPQGKYSKRKGRFKRSDGSTSSDTTSNSFVRQGSA
ESYTSRPSDSDVSLEEDREALRKEAERQALAQLEKAKTKPVAFAVRTNVGYNPSPGDEVP
VQGVAITFEPKDFLHIKEKYNNDWWIGRLVKEGCEVGFIPSPVKLDSLRLIQEQKLRQNR
LSSSKSGDNSSSSLGDVVTGTRRPTPPASGNEMTNLAFELDPLELEEEEAEFGEQSSSAK
TSVSSVTTPPPHGKRIPFFKKTEHVPPYDVVPSMRPIILVGPSLKGYEVTDMMQKALFDF
LKHRFDGRISITRVTADISLAKRSVLNNPSKHIIIERSNTRSSLAEVQSEIERIFELART
LQLVALDADTINHPAQLSKTSLAPIIVYIKITSPKVLQRLIKSRGKSQSKHLNVQIAASE
KLAQCPPEMFDIILDENQLEDACEHLAEYLEAYWKATHPPSSTPPNPLLNRTMATAALAA
SPAPVSNLQGPYLASGDQPLERATGEHANVHEYPGELGQPPGLYPSSHPPGRAGTLRALS
RQDTFDADTPGSRNSAYTELGDSCVDMETDPSEGPGPGDPAGGGTPPARQGSWEDEEEDY
EEELTDNRNRGRNKARYCADGGGPVLGRNKNELEGWGRGVYIR
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggtccagaagagcagcatgtcccggggcccttacccaccctcccaggagattcccatg
gaggtcttcgatcccagcccacagggcaaatacagcaagaggaaaggacggttcaaacgg
tctgatgggagcacttcctcagatacaacatccaacagctttgtccggcagggctcagca
gagtcctacactagccgcccgtcagactctgacgtgtctctagaagaggaccgggaagcc
ttgaggaaggaggcagaacgtcaggcgttagctcagcttgagaaagccaagaccaagcca
gtagcatttgctgtgcggacaaatgtcggctacaatccatctccaggggatgaggtgccg
gtgcagggagtggccatcacctttgagcctaaggacttcttgcatatcaaggagaaatac
aataatgactggtggattgggcgcctggtgaaggaaggctgtgaggttggcttcatcccc
agccctgtcaaactggacagcctacgcctgattcaggaacagaagcttcgccagaatcgc
ctcagctccagcaaatcaggtgacaactccagttccagtctgggagacgtggtgactggc
acccgccgccccacaccccctgccagtggtaatgaaatgactaacttagcctttgaacta
gaccccttagagttagaggaggaggaggccgagtttggtgagcagagcagctctgccaag
actagtgttagcagtgtcaccaccccgccgcctcatggcaaacgcatccccttctttaag
aagacagagcatgtgcccccttatgacgtggtgccttccatgaggcccatcatcctggtg
ggaccgtcgctcaagggctatgaggttacagacatgatgcagaaagctttatttgacttc
ttgaagcatcgatttgatggcaggatctccatcactagggtgacagctgacatttccctg
gccaagcgctcagtcctcaacaaccccagcaagcacatcatcattgagcgctccaacaca
cgctccagcctggctgaggtacagagtgagattgagcggatcttcgagctggctcggact
cttcagttggtggctctggacgctgacactatcaaccacccagctcagctctccaagacc
tcgttggcccccatcattgtttacatcaagatcacctctcccaaggtacttcagaggctc
atcaaatcccgagggaagtctcagtccaaacacctcaatgtccaaatagcagcctcggag
aagctggcacaatgtccccctgaaatgtttgacatcatcctggacgagaaccaattggag
gatgcctgcgagcatttggctgagtatttggaagcctattggaaggccacgcacccgccc
agcagcacaccacccaatccgctgctgaaccgcaccatggctaccgcagccttggcagcc
agccctgcccccgtctccaacctccagggaccctaccttgcttccggggaccagccactg
gaacgggccaccggggagcacgccaacgtgcacgagtacccgggggagctgggccagccc
ccgggtctttaccccagcagccacccaccaggccgggcaggcaccctgcgggctctgtcc
cgccaagacacgttcgatgctgacacccccggcagccgaaactctgcctacacggagctg
ggagactcgtgtgtggacatggagactgacccctcagaggggccagggcctggagaccct
gcagggggcggcacccccccagcccgacagggctcctgggaggacgaggaagaagactat
gaggaggagctcactgacaacaggaaccgcggccggaataaggcccgctactgcgcagat
ggcgggggtccggttcttgggcgcaacaagaatgagctggagggctgggggcgaggcgtc
tatatccgctga
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