Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101961998
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Entry
101961998 CDS
T10664
Name
(RefSeq) LOW QUALITY PROTEIN: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00510
N-Glycan biosynthesis
iti00513
Various types of N-glycan biosynthesis
iti01100
Metabolic pathways
iti04141
Protein processing in endoplasmic reticulum
Module
iti_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
101961998
00513 Various types of N-glycan biosynthesis
101961998
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101961998
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Gene cluster
GFIT
Motif
Pfam:
Ribophorin_I
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
101961998
NCBI-ProteinID:
XP_040128854
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Position
Unknown
AA seq
586 aa
AA seq
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MEAPATCLLLLLWLGAWAPALGGASQEAQPLVNEEVLRTVDLSSHLAKVTAELVLAHAGG
SSSRVTSFVLALEPELEARLAHLGMQVKGEEEEENNLEVRENKIKGKSGRFFLVKLPVAL
DPGAKMSLVVETVYTQVLQPYPTQITQSEKQLVAFEGNHYFYSPYPTKTQTMRVKLALRN
VESYIKLGNPTRSEDVLDYGPFQNIPAYSQDPFKVHDXNNNPFLTITSMTRVIEVSHWGN
IAVEENVDLKHAGAGLKGPFSRYQRQPDSGTSSMRAFKTILPAAALDXDEIGNVSTSHLL
ILDDSVEMEIRPRFPLFGGWKTHCIVGYNLGDQYALKMRFADHMFDEQVKIILPEGAKNI
QVDSPYEISRAPDELHYTYLDTFGRPVIVAHKKNLVEQHIQDLVVHYTFNKVLMLQEPLL
VVAAFYVLFFTIIIYVRLDFSITKDPAAEARMKVARITEQVLSLVNKRLGLYRHFDETIN
RYKQSRDVSTLNSGKKGLETEHKALSSEIALLQSLLKTEGSDLCDPVSEMQKLDAQVKEL
VLKSAVEAERLVAGKLKKDTYIENEKLISGKHQELVTKIDHILDAL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcccgccacctgcctgcttctgctcctgtggctcggggcctgggccccagct
ctgggcggcgcctcccaggaggcccagccgctggtgaacgaggaagtgctgcgcacggtg
gacctgagcagccacctggccaaagtgactgccgagctggtcctggcgcacgcgggcggc
tcctcgtcgcgggtcacctctttcgtcctggccctggagccggaactggaggcccggctg
gcacacctgggcatgcaggtaaagggagaagaggaggaagagaacaatctagaagtccgg
gaaaacaaaattaagggcaaaagcgggagattcttcctggtcaagctccccgtcgccctt
gacccgggggccaagatgtccctcgtggtggagaccgtgtacacccaggtgcttcagccc
tacccgacgcagatcacacagtcggagaagcagctggtggcgtttgagggcaaccattat
ttctactccccctaccccaccaagacccagaccatgcgcgtcaagctggccttgcgcaac
gtggagagctacatcaagctgggcaaccccacgcgctcggaggatgtgctggactatggg
cctttccagaacattcctgcctacagtcaggatcccttcaaagtccacgactagaacaac
aacccgttcctgaccatcaccagcatgacccgggtcatcgaggtctcccactgggggaac
atcgccgtggaggagaacgtggacctcaagcacgcgggcgccgggctgaaggggcccttc
tcccgctaccagaggcagcccgacagcggcacatcctccatgcgcgcctttaagaccatc
ctgcctgctgcagccctggacngggatgagatcggcaacgtgtccaccagccacctcctc
atcctggacgactctgtggagatggagatccggccacgcttccccctcttcggaggatgg
aagacccactgcatcgtcggctataacttgggcgaccagtacgctctcaagatgaggttc
gcggaccacatgttcgacgagcaggtgaagattatcctccctgagggcgccaagaacatc
caggtggacagtccctatgagatcagccgggccccggatgagctgcactacacctacctg
gacaccttcggccgccccgtgatcgtcgcccacaagaagaacctggtggaacagcacatc
caggacctcgtggtgcactacaccttcaacaaggtgctgatgctgcaggagcctttgctg
gtggtggccgccttctacgtcctcttcttcaccatcatcatctacgtgcgcctcgacttc
tccatcaccaaggaccctgctgcggaggccaggatgaaggtggcccgcatcacggagcag
gtcctgagcctggtgaacaagaggctgggcctctaccgccacttcgacgagaccatcaac
aggtacaagcagtcgcgcgacgtgtccacgctcaacagcggcaagaagggcctagagacc
gagcacaaggccctgagcagcgagatcgccctgctgcagtccctcctgaagaccgagggc
tccgacctctgcgacccggtgagcgagatgcagaagctggacgcgcaggtgaaggagctg
gtgctcaagtcggccgtggaggccgagcggctggtggccggcaagctcaagaaggacacc
tacatcgagaacgagaagctcatctcagggaagcatcaggagctggtcaccaagatcgac
cacatcctggacgccctgtag
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