Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101962033
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Entry
101962033 CDS
T10664
Symbol
Shank3
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
101962033 (Shank3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
Ank_3
PDZ_6
Ank_5
PDZ
SH3_2
SH3_9
FERM_f0
Motif
Other DBs
NCBI-GeneID:
101962033
NCBI-ProteinID:
XP_040137712
LinkDB
All DBs
Position
Unknown
AA seq
1698 aa
AA seq
DB search
PARDRRGEWVPAHDPAPPQKCLRLDPTAPVWAAKQRVLCALNHSLQDALNYGLFQPPSRG
RAGKFLDEERLLQEYPPNLDTPLPYLEFRYKRRVYAQNLIDDKQFAKLHTKANLKKFMDY
VQLHSTDKVARLLDKGLDPNFHDPDSGECPLSLAAQLDNATDLLKVLRNGGAHLDFRTRD
GLTAVHCATRQRNAGALTTLLDLGASPDYKDSRGLTPLYHSALGGGDALCCELLLHDHAQ
LGTTDENGWQEIHQACRFGHVQHLEHLLFYGANMGAQNASGNTALHICALYNQESCARVL
LFRGANKDVRNYNSQTAFQVAIIAGNFELAEVIKTHKDSDVVPFRETPSYAKRRRLAGPS
GLASPRPLQRSASDINLKGEAQPAASPGPSLRSLPHQLLLQRLQEEKDRDRDGDQENDAG
GPSSRGSQSKIRCWEATVLQLPTTLTSCLASVSPVLSIGEGGFWEGTVKGRTGWFPADCV
EEVQMRQYDTRRETREDRTKRLFRHYTVGSYDSLTSHSDYVIDDKVAVLQKREHEGFGFV
LRGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHKQ
VVALIRQGGNRLVMKVVSVTRKPEEDGARRRAPPPPKRAPSTTLTLRSKSMTAELEELAS
IRRRKGEKLDEILAAAAEPALRPDIADADSRAATVKQRPTSRRITPAEISSLFERQGLPG
PEKLPGSLRKGIPRTKSVGEDEKLASLLEGRFPRSTSMQDSGREGRGIPPPPQTAPPPPP
APYYFDSGPPPAFSPPPPPGRAYDTVRSSFKPGLEARLGAGTAGLYEPGAPLGPLPYPER
QKRARSMIILQDSAPEAGDIPRPGPAGTPPERPKRRPRPPGPDSPYANLGAFSASLFAPS
KPQRRKSPLVKQLQVEDAQERAALAVGSPGPGGGSFAREPSPTHRGPRQGGLDYGSGDSL
GLAFGGPGPGAGPGKERRLEERRRSTVFLSVGAIEGSPPSADLPSLQPSRSIDERLLGTG
ATTTGRDLLLPSPVSALKPLVSGPSLGPSGSTFIHPLTGKPLDPSSPLALALAARERALA
SQAPSRSPTPLHSPDAERPGPLFVDVQARDSERGPLASPAFSPRSPAWIPVPARREVEKA
PREERKSPEDKKSMILSVLDTSLQRPAGLIVVHATSNGQEPSRLGAEEERPGTPELAPAP
MQTASVTEPLPSPRAQPPGSTPTDPGPGQGSSEEEPELVFAVNLPPAQLSSSDEETREEL
ARIGLVPPPEEFANGILLATPPPGPGPLPTTVPSPASGKPSSEPPPAPESAADSGVEEAD
TRSSSDPHLETTSTISTVSSMSTLSSESGELTDTHTSFADGHTFLLEKPPVPPKPKLKSP
LGKGPVTFRDPLLKQSSDSELMAQQHHAASAGLASAAGPARPRYLFQRRSKLWGDPVESR
GLPGPEDDKPTVISELSSRLQQLNKDTRSLGEEPAGGLGGLLDPTKKSPIAAARCASPQA
GLLLFSSLGELSTISAQRSPGGPGSGASGASYSVRPSGRYPVARRAPSPVKPASLERVXG
AGGAGRPFGLTPPTILKSSSLSIPHEPKEVRFVVRSVSARSRSPSPSPLPSPAPGPGPGA
PGPRRPFQQKPLQLWSKFDVGDWLESIHLGEHRDRFEDHEIEGAHLPALTKDDFVELGVT
RVGHRMNIERALRQLEGS
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
cctgcgcgggaccggcggggcgagtgggtccctgctcacgatcccgctccgccgcagaag
tgtctgcgcctggacccgaccgcacccgtgtgggccgccaagcagcgcgtgctctgcgcc
ctcaaccacagcctgcaggacgcgctcaactacgggctcttccagccgccctccagggga
cgtgccggcaagttcctggatgaggaacggctcctgcaagagtaccctcccaacctggac
acgcccctgccctacctggagtttcgatacaagcggcgtgtttatgcccagaacctcatt
gatgacaagcagtttgcaaagctgcacacaaaggcaaacctgaagaaattcatggactat
gtccagctgcacagcacagacaaggtggcccgtcttctggacaaggggctagaccccaat
ttccatgaccctgattcaggagagtgccctctgagccttgcggcccagttagacaatgcc
acggacctgctgaaggtgctgaggaatggtggtgctcacctggacttccgcactcgagat
gggctaactgccgtgcactgtgccacccggcagcggaatgcaggggcattgacgaccctg
ttggacctgggtgcttcacctgactacaaagatagccgcggcctgacacccctgtaccac
agtgccctgggtggcggggatgccctctgctgtgagctgcttctccatgaccatgcgcag
ctggggaccacggatgagaatggctggcaggagatccaccaggcctgtcgcttcgggcac
gtgcaacacctggagcacctgctattctacggagccaacatgggtgcccagaatgcctcg
ggaaacacagcactgcatatctgtgctctctacaaccaggagagttgtgctcgggtcctg
ctcttccgaggagccaacaaggatgttcgcaattacaacagccagacggccttccaggtg
gccatcattgcagggaactttgagctggcagaggtcatcaagactcacaaagactccgat
gttgtgccattcagggaaacccccagctatgcgaaacggcggagactggctggccccagt
ggcttggcatcccctcggcctctgcagcgctcagccagcgacatcaacctgaagggcgag
gcacagccggcagcctctcctgggccctctctgcgaagcctcccccaccagctgctgctc
cagcggctgcaggaggagaaagaccgcgatcgtgatggtgaccaggagaatgacgccggt
ggcccttcaagcaggggcagccagagcaagatcaggtgctgggaggccactgtcctgcag
ctccctactactctcacctcctgtctggcttctgtctctccagtgctcagcatcggggaa
ggcggcttctgggaggggaccgtgaagggtcgcacaggctggttcccagctgactgtgtg
gaggaggtgcagatgcgacagtatgacacgaggcgtgaaacccgggaggaccggacgaag
cggcttttccgccactacacggtgggctcctatgacagcctcacttcacacagtgactac
gtcattgatgacaaggtggctgtcctacagaaacgggaacacgagggctttggcttcgtg
ctccggggggccaaagcagagacccccatcgaggagttcacacccacgccggccttccct
gcgctccagtacctggagtcggtggatgtggagggtgtggcctggagggcgggactgcgc
acgggagacttcctcatcgaggtgaacggggtgaatgtggtgaaggttggacacaagcag
gtggtggccctgatccgccagggtggcaaccgcctggtgatgaaggtcgtgtctgtgacc
aggaagccagaggaggacggggctcggcgcagagccccaccccccccaaagagggctccc
agcaccacactgaccctgcgctccaagtccatgactgccgaactcgaggaactcgcctcc
attcggagaagaaaaggggagaagctggatgagatcctggcagctgcggcagagccggca
ctgaggccagacattgcagacgccgactccagagccgccacggtcaagcaacggcccacc
agccggaggatcacccctgctgagatcagttcattgtttgagcgccagggcctcccaggc
ccagagaagctgccgggctctctgcggaaggggattccacggaccaagtctgtaggggag
gatgagaagctggcgtccctactggaagggcgcttccctaggagcacatcgatgcaggac
tctgggcgtgaggggcgcggcatcccgcccccgccacagaccgcgcctccgcccccgcca
gcaccctactacttcgactcggggccgccccctgccttctcaccaccacccccgccgggc
agagcctatgacacggtacgctccagcttcaagccaggcctggaggcacgcctgggggcg
gggacagccggcctctacgagcccggcgcgcccctgggcccactgccctatcccgagcgg
cagaagcgcgcgcgctccatgatcatcctgcaggactcggcgccggaagcaggcgacatc
ccccggcccgggcccgcaggcacaccgcctgagcgcccgaagcgcaggcctcggccaccc
ggccccgacagcccctacgccaacctgggcgccttcagcgccagcctcttcgcgccgtcc
aagccacagcgccgcaagagcccgctggtgaagcagctgcaggtggaggatgcacaggag
cgagcggccctggctgtgggcagtcctggcccaggcggaggcagcttcgccagggagccg
tccccgacgcaccgcggcccccggcagggcggcctcgactatggctcgggggacagcctg
ggactggcgtttgggggcccaggccccggtgcgggccctggcaaggagcgacggcttgag
gaacggcgtcgctccacggtgttcctgtcagtgggtgccatcgagggcagcccccccagt
gctgacttgccatctttgcagccctcacgctccatagatgagcgcctcctggggaccggc
gccaccaccaccggccgcgacctgctgctcccttccccagtctctgctctgaagccattg
gtcagtggtcccagccttgggccctcgggctccaccttcatccacccactcactggcaaa
cccttggaccctagctcacccttggccctggctctggctgcccgagaacgagctctggcc
tcacaggcaccctcccggtcccccacgcccctgcacagccctgatgcagaacgccctgga
cccctgtttgtggatgtgcaggcccgggattcagagcgagggcccttggcctctccagct
ttttccccgaggagcccagcctggattcctgtacctgcccggagggaggtagagaaggcc
cctagggaggagcgtaagtcacccgaggacaagaagtccatgatcctcagcgtcttggat
acttcactgcagcggccagctggcctcattgttgtgcatgccaccagcaatgggcaggag
cccagcaggttgggagctgaagaggagcgcccgggcaccccagagctggccccggctccc
atgcagactgcatcagtgacagagcccctgcctagcccccgggcccagcccccaggcagc
accccaacagaccctggaccaggccagggcagctcagaagaggagccagagctggtgttt
gctgtgaacctgccgcctgctcagctgtcctccagtgatgaggagacccgggaggagttg
gcccgcattgggctggtgccaccccctgaagagtttgccaatggaatcctgctggccacc
ccaccccctggcccgggcccattgcccaccacggtgcccagcccggcctcagggaagccc
agcagtgagccaccccctgcccctgagtctgcagccgactctggcgtggaggaggctgac
actcgaagttccagtgacccccacctggagaccacaagcaccatctccacagtgtccagc
atgtccaccctgagctcagagagcggggaactcaccgacacccacacctccttcgctgat
ggacatacttttctactcgagaagccaccagtgcctcccaagcccaagctcaagtccccg
ctggggaaggggccggtgaccttcagggacccgctgctgaagcagtcctcggacagcgag
cttatggcccagcagcaccacgccgcctctgccgggctggcctctgccgccgggcccgcc
cgccctcgctacctcttccagagaaggtccaagctgtggggggaccccgtggagagccgg
ggcctcccggggcctgaagacgacaaaccaactgtgatcagcgagctcagctcccgcctg
caacagctgaacaaagacacgcgctccctgggggaggagccagctggtggcctgggcggc
ctgctggaccccaccaagaagtcacccatcgcagcagctcgctgcgcgtcaccccaggca
ggcctcctgctcttcagcagcctcggtgagctgagcaccatctcagcgcagcgcagcccc
gggggcccgggcagcggggccagcggggcctcctactctgttcggcccagcggccgctac
cccgtggcgcgacgcgccccgagcccagtgaagcccgcgtcgctggagcgggtgngaggc
gcgggaggcgcggggcggcccttcggcctcacgcctcccaccatcctcaagtcgtccagc
ctctccattccgcacgagcccaaggaggtgcgcttcgtggtgcgcagcgtgagtgcgcgc
agccgctccccttcgccgtcaccgctgccctcgcctgcgcctggccccggccccggcgcc
cccggcccgcgtcggcccttccagcagaagccgctgcagctctggagcaagtttgatgtg
ggcgactggctggagagcattcacctaggcgaacaccgcgaccgcttcgaggaccacgag
atcgagggcgcgcacctgcccgcactcaccaaggacgacttcgtggagctgggcgtcacg
cgcgtgggccaccgcatgaacatcgaacgcgcgctcaggcagctggaaggcagctga
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