Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101962065
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Entry
101962065 CDS
T10664
Symbol
Nefm
Name
(RefSeq) neurofilament medium polypeptide isoform X1
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti05014
Amyotrophic lateral sclerosis
iti05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101962065 (Nefm)
05022 Pathways of neurodegeneration - multiple diseases
101962065 (Nefm)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
iti04812
]
101962065 (Nefm)
Cytoskeleton proteins [BR:
iti04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
101962065 (Nefm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
ATG14
DUF1664
Motif
Other DBs
NCBI-GeneID:
101962065
NCBI-ProteinID:
XP_021575540
LinkDB
All DBs
Position
Unknown
AA seq
861 aa
AA seq
DB search
MSYTLDSLGNPSAYRRVTDTRSSFSRVSGSPSSGFRSQSWSRGSPSTVSSSYKRSALAPR
LTYSSAMLSSAESSLDFSQSSSLLNGGSGGDYKLSRSNEKEQLQGLNDRFAGYIEKVHYL
EQQNKEIEAEIQALRQKQASHAQLGDAYDQEIRELRATLEMVNHEKAQVQLDSDHLEEDI
HRLKERFEEEARLRDDTEAAIRALRKDIEESSMVKVELDKKVQSLQDEVAFLRSNHEEEV
ADLLAQIQASHITVERKDYLKTDISTALKEIRSQLECHSDQNMHQAEEWFKCRYAKLTEA
AEQNKEAIRSAKEEIAEYRRQLQSKSIELESVRGTKESLERQLSDIEERHNHDLSSYQDT
IQQLENELRGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSTFAGSITGP
LYTHRQPSVTISSKIQKTKVEAPKLKVQHKFVEEIIEETKVEDEKSEMEDALAAIAEELA
VSAKEEEKEEETEEKEEEQEAEEEAALAKKSPVKAAAPEIKGEEEGEKEEEEGQEEEEEE
EEEGAKSDQAEEGGSEKEGSSEKDEGEQEEEGETEAEAEGEEAEAKEEKAEEAGAKEELG
KPEKAKSPAPKSPVEEAKPKAEAQVGKEEDQKKLAKEAPKEEKVEKKEEKPKDVPEKKKA
ESPGKEKAESPGKEKAESPTKEKAESPGKEKAPEEVVSKTPKVSLEKDAKEEKPQQEKEK
EKVEEEGGREGEGSDQGAKESRKEDIAVNGEVEGKEEEQETKEKGSGREEEKGVVTNGLD
VSPTDEKKGDDRSEEKVVVTKKVEKITSEGGDGATKYITKSVTVTQKVEEHEETFEEKLV
STKKVEKVTSHAIVKEVTQSD
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgagctacacgttggactcgctgggcaacccgtccgcctaccggcgggtaaccgacacc
cgctccagcttcagccgagtcagcggctccccgtccagcggcttccgctcgcagtcttgg
tcccggggctcgcccagcaccgtgtcctcctcctacaagcgcagcgcgctcgccccgcgc
ctcacctacagctcggctatgctcagctccgcggagagcagcctcgacttcagccagtcc
tcgtccctgctcaacggcggttccgggggcgactacaagctgtcccgctccaacgagaag
gagcaactgcaggggctgaacgaccgcttcgccggctacatcgagaaagtgcactacttg
gagcagcagaacaaggagatcgaggcagagatccaggcactgcggcagaaacaggcctcg
cacgcccagctgggcgacgcgtacgaccaggagatccgcgagctgcgcgccacactcgag
atggtgaaccacgagaaggctcaggtacagctggattctgaccacctagaggaagacatc
caccggctcaaagagcgcttcgaggaggaggcacggctgcgcgacgacaccgaggcggcc
atccgcgcgctgcgcaaagacatcgaggagtcgtcgatggtcaaggtagagctggacaag
aaggtgcagtctctgcaggatgaggtggccttcctgcggagcaatcatgaagaagaggtg
gcagacctgctggcccagatccaggcgtcgcacatcaccgtggagcgcaaagactacctg
aagacagacatctcgacagcgctgaaggagatccgctctcagctcgagtgccactctgat
cagaacatgcaccaggccgaagagtggtttaaatgtcgctacgccaagctcaccgaggcg
gccgagcagaacaaggaggccatccgctccgccaaggaagagatcgccgagtaccggcgc
cagctgcagtccaagagcatcgagctggagtctgtgcgcggcaccaaggagtccctggag
cggcagctcagcgatatagaggagcgccacaatcacgacctcagcagctaccaggatacc
atccagcagctggaaaatgagcttcggggaacaaagtgggaaatggctcgtcatttgcgg
gaataccaggatctcctcaacgtcaagatggccctggatatcgagatcgctgcgtacaga
aaactcctggagggagaagagaccagattcagcacgtttgccggcagcatcactgggcct
ctgtacacgcaccggcagccctcagtcacaatatccagtaagattcagaaaaccaaagtg
gaggctcccaagctgaaggtccagcacaagttcgtggaggagatcatcgaggaaaccaaa
gtggaggatgagaagtcggagatggaagacgccctggcggccatcgcggaggaactggca
gtttccgccaaggaagaggagaaggaagaagagacggaagaaaaggaagaggaacaggaa
gccgaagaagaagccgcacttgccaaaaagtctcccgtgaaggctgcagcccctgaaatc
aaaggagaggaagagggggagaaggaggaagaggaaggccaggaggaggaagaggaggag
gaggaggagggtgccaagtccgaccaagctgaagagggagggtctgagaaggaaggctcc
agcgaaaaagacgaaggtgagcaggaggaggagggggagacggaggcagaagctgaaggg
gaggaagcggaggccaaggaggaaaaggctgaagaagcgggtgccaaggaggagctggga
aagccagagaaggccaagtccccggcgcccaagtctccagtggaagaggcgaagccaaag
gctgaagcccaagtggggaaagaggaagaccagaaaaagctggccaaggaggcccccaag
gaggagaaggtagagaagaaggaggagaagccaaaagacgtgccagagaagaagaaggcc
gagtccccagggaaggagaaggccgagtccccagggaaggagaaggccgagtccccaacc
aaggagaaggccgagtccccagggaaggagaaggccccagaggaggtggtcagcaaaacc
ccaaaggtgagcttggagaaagatgccaaagaagagaagcctcagcaggagaaggagaag
gagaaggtggaagaggagggagggagggagggggaagggagtgaccagggtgcaaaggaa
tccaggaaggaagacatagcggtcaacggggaggtggaagggaaagaggaagagcaggaa
accaaggagaagggcagtgggagggaagaggagaaaggcgtggtcactaacgggctagac
gtgagccccacggatgagaagaagggggacgacagaagtgaggagaaggtggtggtgacc
aagaaggtagaaaagatcaccagtgaggggggcgatggtgctaccaaatacatcactaaa
tccgtcaccgtcactcaaaaggtcgaagagcatgaggagacctttgaggagaaactagtg
tcaactaaaaaggtagaaaaagtcacttcacacgccatagtcaaggaagtcacccagagt
gactaa
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