Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101962077
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Entry
101962077 CDS
T10664
Symbol
Rpgrip1
Name
(RefSeq) X-linked retinitis pigmentosa GTPase regulator-interacting protein 1 isoform X1
KO
K16512
X-linked retinitis pigmentosa GTPase regulator-interacting protein 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
iti03037
]
101962077 (Rpgrip1)
Cilium and associated proteins [BR:
iti03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
101962077 (Rpgrip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPGR1_C
C2-C2_1
C2
Motif
Other DBs
NCBI-GeneID:
101962077
NCBI-ProteinID:
XP_021576593
LinkDB
All DBs
Position
Unknown
AA seq
1253 aa
AA seq
DB search
MMSQVVKHASGFLLVRDIDSIPLSKGKNIKTQLPSTKMSRQELEDSLFRLQEDHILLKEL
FWKQKDEIKRLRTTLLRLTAAGRDLRPDAAVAQFPKPTRRRRKAEWRQRFPVHQSQAMNQ
RPPMHQRQTLRQRAPVHQRPLTQKLQAQVQRLSLSAPGGGQARVHVGRRRLHTAGGRVPE
KSQEGSRDRLSYTAPPTFKEQVTNEKTRDEITNKPSSELAHIMANNTMQVEEPPTPPEKM
WSQDENFEQRNSLECAQKAAELRNSIKENVELIRLKKLLHERNTSLAVTKAQLTEVQENQ
GILSAAHDALLSQVNELREELKEESKKAVSLKSQLEDVSILQTTLKEFQERVEDLEKERE
LLNDSYDRLLENMLDSSNQPHWSNEFLGEQLRQQVCQLQDQLDAELEEKKKVLDQLSSEK
AQNKVLKLEVTNILQNHKQEVEILQMTATTPESPDDQSEPDTHPDLFLETALIAHGEPEI
QEEKQLTQMLSELQVLHSETTLELEKTRDMLLLQRKINVCYQEELEAMMTKTDSESKDHK
EKLERLSQLLDVKNNRIRQLEGILRSHGLPISEQLKDVAYGTRQLSLCLESRSAHGAEDE
VDISLLHWSENLFELHIHQAFLTPAALTQAGDIQPTTFCTYSFYDFETHSTPLSVGPQPL
YDFTSQYVVDIGSLFLHYLQVASARVDLHQAVGSEHHTLATGQICFDKVLETVEKVHGSA
VLTGAAGEDCGVLEYWMRLRLPLRSNLWACNKQKKAQAYLSANVLDAWKAQEDESRSEAL
KHQNELRIEITRCRGLRNRRLGTQPSPYAMYRFFTFSDHDTAIIPASNDPYFGDQARFPV
LVTSDLDEYLRREALSIYVFDDEDSEPGSYLGRVQVPLLSLAQNKSIKGDFNLTDPTEEP
NGSVQVQLDWKACYVPPENFLKPEAQTEENDTKDQIAFSEIPIEADQYQAKRKLPQMGEK
KEKEHQVASYSRRKHGKKIVVQGKNRMEYLSRNVLNGNTLQQVNYTEWKFSGLNIDDGLK
TQTNEKEMTLSQSALKEEELPHPINADQEFCEQASEASEAQTTDSDDIIVTPISQKCPKT
DSEKMCIEIVSLTFYPEAEVMSDENIKQVYVEYRFYDLPLSETETPVSLRKPRKGEEIHF
HFSKVIDLDPLEQQGRRQFLFAMLNAQNPEQGHLKFTVVSDPMDEEKKECEEVGYAYLGL
WQILESGRDILEQELDIFSPEDQAIPIGRLKVSLQAAAALHGIYKEMTEDLFT
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcacaggtggtgaaacatgcatcagggtttctgctggtcagagacatcgactca
atacctctgtcaaaaggtaagaatataaaaactcaactaccctctaccaagatgagccga
caggaactagaggacagtctctttcgacttcaggaagatcacatcttgttgaaggagctt
ttttggaagcaaaaggatgagatcaaaaggctgaggacgaccttactccgattgaccgcc
gctggtcgagacctgcggccggatgcggcagtggcgcagttcccaaagcccacaaggcgg
cggcggaaagcggagtggcggcagcgcttcccggtgcatcagagccaagccatgaatcag
cgtccgcccatgcaccagcgccaaaccctgcgccagcgcgccccggtgcaccagcgccct
ctgacgcagaagttgcaagcacaggttcagcgcctcagtctgtctgctccgggtggtggc
caggctcgggtccacgtgggacgcagaagactccataccgctggtgggagggtgcctgag
aaatctcaggaggggtcaagagacaggctgagctacacagcccctcccacatttaaggag
caggtgacaaatgagaaaaccagagatgaaataaccaataagcccagcagcgaacttgcc
cacattatggccaacaatactatgcaagtggaagaaccacccacacctcctgagaaaatg
tggtcccaagatgaaaattttgaacagagaaactcattggagtgtgcccagaaggctgca
gagctacgcaattccattaaagagaatgtggaactgattcgactcaagaagctcttacat
gaaaggaacacctccctggcagtgacaaaagcacaattaactgaagttcaagagaatcaa
ggaatcctgagtgcagcccatgatgccctactcagccaagtgaatgagctcagagaagaa
ctgaaggaagaaagcaagaaggctgtgagcttgaagagccaactagaagatgtgtctatc
ttgcagacaactctgaaggagtttcaggagagagtcgaagatttggagaaagaacgagaa
ttgctgaatgacagttatgacagactcttagaaaacatgctggacagcagtaatcagcct
cactggagcaatgagttcctgggagaacagctgaggcagcaagtatgtcagttgcaggat
cagctggatgctgagctggaggagaagaaaaaggtcttagatcagctgtccagtgagaaa
gctcaaaacaaggttctgaagcttgaagttaccaacatccttcagaatcataaacaggaa
gtagagatccttcaaatgacagccacaacacctgagtctcctgatgatcaatctgaaccc
gacactcacccagatctgttcctagagacagctctgatagcgcacggggaaccagaaata
caagaagaaaaacaactgacccagatgctaagtgaattgcaagtattgcattcagagacc
acactagaactagaaaagaccagagacatgctccttctgcagcgaaaaatcaacgtgtgt
tatcaggaggaactggaagcaatgatgacaaaaactgacagcgaaagtaaagatcacaaa
gaaaagctggagaggctgagtcagctcctagacgtcaagaacaaccgtatcaggcagctg
gaaggtattttgagaagccatggccttccaatatctgaacaactcaaagatgttgcttat
ggcactcgacagttgtcattgtgtctggaatcacggtcagcccatggagcggaggatgaa
gtggacatttctttgctgcattggagtgaaaatctttttgaactgcatatccaccaggcc
ttcttgacacctgctgccctgactcaggctggagacatccaacctaccactttctgcacc
tattccttctatgattttgaaacccacagtaccccattatctgtgggaccacagcccctt
tatgactttacatcccagtatgtggtggacataggttcccttttcttgcactaccttcaa
gtggcttcagcccgggttgatctacatcaggctgtgggcagtgagcaccatactcttgcg
actggacagatttgctttgacaaagtgctagagactgtggagaaagtccatggctcagct
gtacttactggagctgctggagaagactgcggggtgctagagtactggatgaggctacgc
ttgcccctaagatccaacctatgggcatgcaataaacaaaagaaagcccaggcctacctg
tcagccaatgtgcttgatgcctggaaggctcaggaggatgagtccagatcagaagccttg
aaacatcagaatgagctgcggatcgaaatcaccaggtgccgtggtctccggaatcgaagg
ctaggaactcaacccagtccctatgccatgtaccgcttcttcaccttttctgaccatgac
actgccatcattccagccagtaatgatccctactttggagaccaggctcgattcccagtg
cttgtgacctctgacctggatgagtatctgaggcgggaggccctgtccatatatgttttc
gatgatgaagactcagagcctggctcctaccttggcagagtccaagtgcccttgctgtct
cttgcacagaacaaatctattaaaggtgattttaacctcactgaccctacagaggaacca
aatggttctgttcaagtacaactggattggaaggcttgctatgtaccacccgagaacttc
ctgaaaccagaggctcagactgaggaaaatgacaccaaggaccagatagcattttctgag
attcccattgaagctgaccagtatcaagcaaagagaaaacttcctcagatgggagagaaa
aaagaaaaggaacaccaggttgcaagctactcaagaagaaaacatggaaaaaaaatagtt
gtccaaggaaagaatagaatggagtatcttagtcgtaatgtcttaaatggaaacacacta
caacaggtgaactataccgagtggaaattctcagggcttaacatagatgatggtcttaaa
actcagaccaacgaaaaggaaatgacattatcacagtcagcactgaaagaagaggaactc
ccacatcctataaatgcagatcaagaattctgtgaacaagcttctgaagccagtgaagca
caaactacagacagtgatgacatcatagtgacacccatatctcagaaatgtcctaagaca
gattcagagaagatgtgcattgaaatagtctccctgaccttctatccagaggctgaagtg
atgtctgatgagaatataaagcaggtgtatgtggagtatagattctacgatctacccttg
tctgagacagagactccagtatccctgaggaaaccgaggaaaggagaagaaatccacttc
cactttagcaaagtgatagacctggacccactggagcaacaaggccgaaggcaatttctg
tttgccatgttgaatgcacaaaatcctgagcaaggacatttaaagtttacagtggtgagt
gatcctatggatgaagaaaagaaagaatgtgaagaagtaggatatgcataccttggactg
tggcagatccttgaatcaggaagagatattctagaacaagaattagatatttttagccct
gaagaccaggcaattccaataggaaggctgaaagtttctcttcaagcagctgctgccctc
cacggtatttacaaggagatgactgaagatttgtttacatga
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integrated database retrieval system
