Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101962130
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Entry
101962130 CDS
T10664
Symbol
Hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
Membrane trafficking [BR:
iti04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
101962130 (Hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101962130
NCBI-ProteinID:
XP_005335301
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Position
Unknown
AA seq
703 aa
AA seq
DB search
MKCVLVATEGAEVLFYWTDEEFKESLRLKFGQSENEEEELPALEDQLSTLLAPVIISSMT
MLEKLSDTYTCFSTENDNSLYVLHLFGECLFIAINGDHSENEGDLRRKLCVLKYLFEVHF
GLVTMDGQLIRKELRPPDLEQRVQVWEHFQSLLWTYSRLREQEQSFAVEAVERLIHPQLC
ELSIEALERHVIQAVNSSPERGSEEALHAFLLVHCKLLAFYSSHGASSLRPADLLALILL
VQDLHPSESTVEDDDDGQPSPGRRPHRSQNIPVQQARSPRVSGPTKGSSAETDTDSFSLP
EEYFTPAPSPGQQSSGSTIWLEGGTPPTDVPQIAEDTLQTKVPHSPVPSSPRRIFLDASI
KEIYCPLVPHTMYCLPLWPGINMVLLTKSPSTPLALVLYQLLDGLSLVEKKLKEGQEAGS
GLRSQPLLGELRQRMDKFIKNRGGQEIQSTWLEFKTKAFSKSEPGSSWELLQVCGKLKRQ
LCSIYRLSFLTTAPSRGGPHLPQHLQDKVQKLMRERLMDWKDFLLVKSRRNITMVSYLED
FPGLVHFIYVDRTTGQMVAPSLSSSEKTSSELGKGPLAAFVKAKVWALVRLARRYLQKGY
TTLLFHEGDFCCSYFLWFENDMGYKLQMIEVPVLSDDSVPIGVLGGDYYRKLLRYYSKSH
PTEAIRCYELLALHLSVIPTNLLVQQASQLARRLGEASRVPLP
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtgtcttggtggccactgagggtgcagaggttctcttctactggacagatgaa
gagtttaaagaaagtctccgactgaagttcgggcaatcagagaatgaggaagaagagctt
cctgccctggaagaccagctcagcaccctcttggccccagtcatcatctcctccatgacg
atgttggagaaactctcagacacatacacatgcttctcaacagaaaatgacaactccctg
tatgtccttcacctgtttggagaatgcctattcatcgccatcaatggggaccactctgag
aacgagggagatcttcggcggaagctctgtgtgctcaagtacctgttcgaggtgcacttt
ggactggttactatggatggccagctcatccgaaaggagttacggcctcctgacctggag
cagcgcgtccaggtgtgggagcacttccagagcctactgtggacctatagccgcctacgg
gagcaggagcagagcttcgctgtggaggctgtggagcggctgattcacccccagctctgt
gagctgagcatagaggcgctggagcggcatgtcatccaggctgtcaactccagccctgag
cggggcagtgaggaggccctgcacgcgttcctgctcgttcactgcaagctgctggccttc
tactccagccatggtgcaagttccctgcgcccagccgaccttctcgccctcatcctcctg
gttcaggatctccacccaagtgagagcacagtagaggacgacgatgatggccagccttcc
ccagggaggaggccccacagaagccagaacatccctgtgcagcaggcccggagcccacgt
gtctcgggcccaaccaaggggagttcagcagagacggatacagacagcttctctctccct
gaagagtacttcacaccagctccttcccctggccagcagagctcaggtagcaccatctgg
ctagaagggggcaccccaccaactgatgttccccagatagctgaggacaccctccagaca
aaggttcctcactccccagtgccttccagccccagaagaatcttcctggatgccagtata
aaagaaatttattgccctttggtgccccacaccatgtactgcctacctctgtggccgggc
atcaacatggtgctcctgaccaagagccccagcaccccactggccttggtcctgtaccag
ctgctggatggtctttccctggtggagaagaagctgaaggagggccaggaggctggcagt
ggcctgcggtcccagcccctcctgggagaactgcgccagagaatggacaagttcatcaag
aatcgagggggacaggagattcagagcacctggctggagtttaagaccaaggccttctcc
aaaagcgaaccgggatcatcctgggagctgctccaggtgtgtgggaagctgaagcggcag
ctctgctccatctaccggctcagcttcctgaccacagcgcccagcaggggaggcccacac
ctgccccagcacctgcaggacaaagttcagaagcttatgcgggagaggctgatggactgg
aaggactttctgttggtgaagagcaggaggaacatcaccatggtgtcctacctggaggac
ttcccaggcttggtgcatttcatctacgtggaccgaacaactgggcagatggtggcacct
tcccttagcagcagtgaaaagacttcatcagaattgggcaaggggcccctggccgccttc
gtcaaagccaaggtctgggccctggtccggctggcgcgccgatacctgcagaagggctac
actactctgctgttccacgagggggacttctgctgctcctacttcctgtggtttgagaac
gatatgggctacaagctgcagatgattgaggtgcctgtcctctccgatgactcagtcccc
attggtgtgctgggaggtgactactacaggaagctccttcgctactacagcaagagccac
cccacggaggccatcaggtgctacgagctgctggccctgcacctgtcagtcatccccacc
aacctgctggtgcaacaggccagccagctcgcccggcgcctgggggaggcctcccgtgtg
cccctgccctag
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