Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101962158
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Entry
101962158 CDS
T10664
Symbol
Nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X2
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04621
NOD-like receptor signaling pathway
iti05132
Salmonella infection
iti05133
Pertussis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101962158 (Nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101962158 (Nod1)
05133 Pertussis
101962158 (Nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
iti04054
]
101962158 (Nod1)
Pattern recognition receptors [BR:
iti04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
101962158 (Nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
NLRC4_HD2
NOD2_WH
LRR_4
LRR_6
AAA_16
AAA_22
PIF1
ABC_tran
AAA_25
RsgA_GTPase
AAA_18
Motif
Other DBs
NCBI-GeneID:
101962158
NCBI-ProteinID:
XP_013211436
LinkDB
All DBs
Position
Unknown
AA seq
895 aa
AA seq
DB search
METQEHRESIPAGSDSYINLLKINRELLVTHIRNTQCVVDNLLKNDYFSAEDAEIVGACP
TQPDKVRKLLDLVQSKGEEVSEFFLYVLQQLADAYVDLRPWLLEICYSPSQLIQSKTIVN
TDPVSRYTQKLRHQLGCDSKFMLCYAQKEDLLLEEIYMDTVMELVSFSNENMGSLGSLSC
LLDHSSGVLNEQGETIFVFGDAGVGKSMLLQRLQSLWASGRLDIGVKFFFHFRCRMFSCF
KESDMLCLQDLLFKHYCYPEQDPDEVFAFLLRFPHVALFTFDGLDELHSDFDLSRVPDSC
CPWEPAHPLVLLANLLSGRLLKGASKLLTARTGVEVPRQLLRKKVLLRGFSPSHLQTYAR
KMFPERPAQDRLLQQLEANPNLCSLCTVPLFCWIIFRCFQHFYTTLEGSPQLSDCTVTLT
DVFLLVTEVHLNRTQPSSLVQRNTRSPAETFSAGWRTLRSLGQVAHSGMERSLFVFTQEE
VQASELQEGDLQLGFLRAVPEMTPEGGQQSYEFFHITLQAFFTAFFLVVDNKVGHRELLR
FFQEWAPPGEAAVESCYPPFFPFQCLGGGRLARSDPFKNKDHFQFTNLFLCGLLSKARQK
LLQHLVPAATLRRKRKALWGHLFASLRAYLKSLPRCQSGGFSQVQAMPTFLWMLRCIYET
QSQKVGQLAAKGICANYLKLTFCNACSADCSALSFVLHHSRKQLALDLDNNNLNDYGVRE
LQPCFSRLTVIRLSVNQITDSGVKVLCEELTKYKILEYLGLYNNQITDVGARYVAQILDE
CKALTHLKLGKNKISSEGGKWLALAVKNSTSISEIGLTQNELNDEVAESFAEMLKVNQTL
KHLWLIQNQITAMGTAQLAKALQNNTGITEICLNGNLIEPEEAKVFEDEKRIICF
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcaggaacaccgtgagagcatcccagctggttctgactcctacatcaacttg
ttgaagatcaaccgggaacttctggtcactcacatccgtaacactcagtgtgtggtggac
aacttgctgaagaatgactacttctcagctgaggatgcagagattgtgggtgcctgcccc
acccaacctgacaaggtccgaaaacttctggacctggtccagagcaagggtgaggaggtt
tctgagttcttcctctacgtgctccagcaactcgcagatgcttatgtggacctcaggcca
tggctgttggagatctgctactctccttcccagctcattcagagcaaaactattgtcaat
accgacccagtgagcaggtacacccagaagctgcggcaccaattgggttgtgactccaaa
ttcatgctgtgttatgcccaaaaggaggacctgctgctggaggagatctacatggatacc
gtcatggagctggtgagcttcagcaacgagaacatgggcagcctgggcagcctgtcctgc
ctcctggaccacagctcaggcgtcctcaacgagcagggtgagaccatcttcgtgtttggg
gacgcgggtgtgggcaaatccatgctgctgcagcggctgcagagcctctgggcctcaggc
cggctggacataggggtcaagttcttcttccacttccgctgccgcatgttcagctgcttc
aaggagagtgacatgctgtgcctgcaggacctgcttttcaagcattactgctacccggag
caggaccccgatgaggtgtttgctttcctgttgcgctttccccacgtggccctcttcacc
ttcgatggcttggacgagctgcattcggacttcgacttgagccgcgtgcctgacagctgc
tgcccctgggagcccgcccacccgctggtcctgctggccaacctgctcagcggaaggctg
ctcaagggcgccagcaagctgctcacggcccgcacgggtgtcgaggtgccccgccagctc
ctgcggaagaaggtgcttctccggggcttttcccccagccacctgcagacttatgcccgg
aagatgttccctgagcgccctgcgcaggaccgcctgctgcagcagctggaagccaacccc
aacctctgcagcctgtgcaccgtgcccctcttctgttggatcatcttccggtgcttccag
cacttctacaccacccttgaaggctccccgcagctttcggactgcacggtgaccctgacc
gatgtcttcctgctggtcaccgaggtccatctgaaccggacgcagcccagcagcttggtg
cagcgcaacacgcgcagcccggccgagaccttcagcgcggggtggcgcacactgcgctcg
ctggggcaggtcgctcatagcggcatggagaggagcctcttcgtgttcacccaggaggag
gtgcaggcctctgagctgcaggagggggacctgcagctgggcttcctgcgggccgtccca
gaaatgacccctgaagggggacagcagtcttatgagtttttccacatcaccctccaggcc
ttctttaccgccttctttctcgtggtggacaacaaggtgggacaccgggagctgctcagg
ttctttcaagagtgggcgcctcctggggaggcagcggtagagtcctgctatccacccttc
tttcctttccagtgcttggggggcggcaggctggcacgttctgatcccttcaaaaacaag
gatcattttcagttcaccaacctcttcctgtgcgggctgttgtccaaagccagacagaaa
ctcctgcagcacctggtgcctgctgccaccctacggaggaagcgcaaggccttgtggggg
cacctgtttgccagcctgcgcgcctacctgaaaagcctaccccggtgtcagtccgggggt
ttcagccaagtgcaggccatgcccaccttcctctggatgctgcgctgtatctacgagacg
cagagccagaaggtggggcagctggcggccaagggcatctgcgccaactacctcaagctg
accttctgcaatgcctgctccgctgactgcagtgccctttccttcgtcctgcaccactcc
cgcaagcagctcgcccttgatctggacaacaacaatctcaacgactacggtgtgcgggag
ctgcagccttgcttcagccgcctcaccgttatcagactcagtgtcaaccagatcacagac
agtggtgtgaaggtgctgtgtgaagagctgaccaagtacaaaatcctggagtatttgggt
ttatacaacaaccagatcacggatgtgggagccaggtacgtcgcccaaatcctggatgaa
tgcaaggccctcacccacctgaaactggggaaaaacaagatatcgagcgaaggagggaag
tggctggccctggctgtgaagaacagcacatccatctctgagattgggctgacccaaaat
gaactcaatgatgaagtggccgagagctttgcagaaatgctgaaagtcaaccagacattg
aagcatttatggctcatccagaatcagatcacagccatggggaccgcccagctggcaaag
gccttacagaacaacactggcataacagagatttgtctaaatgggaacttgatagagcca
gaggaggccaaagtctttgaagatgagaagcggatcatttgtttctga
DBGET
integrated database retrieval system
