Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101962239
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Entry
101962239 CDS
T10664
Symbol
Ptpru
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U isoform X1
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
iti01009
]
101962239 (Ptpru)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iti04515
]
101962239 (Ptpru)
Enzymes [BR:
iti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
101962239 (Ptpru)
Protein phosphatases and associated proteins [BR:
iti01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
101962239 (Ptpru)
Cell adhesion molecules [BR:
iti04515
]
Immunoglobulin superfamily
Type II RPTP family
101962239 (Ptpru)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
Tc-R-P
DSPc
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
PTPlike_phytase
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
101962239
NCBI-ProteinID:
XP_040144182
LinkDB
All DBs
Position
Unknown
AA seq
1467 aa
AA seq
DB search
MLPPQSLKTVICRRGSMKGEESHVTRHAEHDPSESCWDSAGCTFEEASDPAVPCEYSQAQ
YDDFQWEQVRIHPGTRAPADLPHGAYLMVNASQHAPGQRAHVIFQSLSENDTHCVQFSYF
LYSRDGHSPGTLGVYVRVNGGPLGSAVWNMTGSHGRQWHQAELAVSTFWPNEYQVLFEAL
ISPDRRGYMGLDDILLLSYPCAKAPHFSRLGDVEVNAGQNASFQCMAAGRAAEAERFLLQ
RQSGALVPAAGVRHISHRRFLATFPLAAVSRAEQDLYRCVSQAPRGAGVSNFAELIVKEP
PTPIAPPQLLRAGPTYLIIQLNTNSIIGDGPIVRKEIEYRMARGPWAEVHAVSLQTYKLW
HLDPDTEYEISVLLTRPGDGGTGRPGPPLLSRTKCAEPMRAPKGLAFAEILARQLTLQWE
PLGYNVTRCHTYTVSLCYYYTLGSSHNQTVRECVKMERGVNRYTIKNLLPYRDVHVRLVL
TNPEGRKEGKEVTFQTDEDVPGGIAAESLTFTPLEDMIFLKWEEPQEPNGLITQYEISYQ
SIESSDPAVNVPGPRRTISKLRNETYHVFSNLHPGTTYLFSVRARTGKGFGQAALTEITT
NISAPSFDYADMPAPLGESENTITVLLRPAQGRGAPISVYQVIVEEDRPRRLRREPGGQD
CFPVPLTFEAALARGLMHYFGAELAASSLPEAMPFTVGDNQTYRGFWNPPLEPRKAYLIY
FQAASHLKGETRLNCIRIARKAACKESKRPLEVSQKSEEMGLILGICAGGLAVLILLLGA
IIVIIRKGRDRYAYSYYPKPVNMTKATVNYRQEKTHMMSAVDRSFTDQSTLQEDERLGLS
FMDAPGYSPRGDQRSIGVTEASSLLGGSPRRPCGRKGSPYHTGQLHPAVRVADLLQHINQ
MKTAEGYGFKQEYESFFEGWDATKKKDKLKGGRQEPVPAYDRHRVKLHPMLGDPSADYIN
ANYIDIRINREGYHRSNHFIATQGPKPEMIYDFWRMVWQEHCSSIVMITKLVEVGRVKCS
RYWPEDSDMYGDIKITLVKTETLAEYVVRTFALERRGYSARHEVRQFHFTAWPEHGVPYH
ATGLLAFIRRVKASTPPDAGPIVIHCSAGTGRTGCYIVLDVMLDMAECEGVVDIYNCVKT
LCSRRVNMIQTEEQYIFIHDAILEACLCGETTIPVNEFKATYKEMIRIDPQSNSSQLREE
FQTLNSVTPPLDVEECSIALLPRNRDKNRSMDVLPPDRCLPFLISTDGDPNNYINAALTD
SYTRSAAFIVTLHPLQSTTPDFWRLVYDYGCTSIVMLNQLNQSNSAWPCLQYWPEPGRQQ
YGLMEVEFVSGTADEDLVARVFRVQNISRLQEGHLLVRHFQFLRWSAYRDTPDSKKAFLH
LLAEVDKWQAESGDGRTIVHCLNGGGRSGTFCACATVLEMIRCHSLVDVFFAAKTLRNYK
PNMVETMDQYHFCYDVALEYLEALESR
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgttgccaccacagagtttaaaaacagtgatctgcagaagaggcagcatgaaaggtgaa
gagagccacgtcactcgacatgctgagcacgacccatccgagagctgctgggactcagct
ggctgcaccttcgaggaggcgagtgacccagcagtgccctgtgagtacagccaggcccag
tacgacgacttccagtgggagcaagtgaggatccacccgggcacgcgggcccccgcagac
ttgccccacggcgcctacttgatggtcaatgcttcccagcacgccccaggccagcgggcc
catgtcatcttccagagcttaagcgagaacgacacccactgtgtgcagttcagctacttc
ctgtacagccgagatggccacagccctggtaccctgggcgtctatgtgcgtgttaacggg
ggccccctgggcagcgctgtctggaatatgactggatcccatggccgtcagtggcaccag
gctgagctggctgtcagcaccttctggcccaatgaatatcaggtgctgtttgaggccctc
atctccccagaccgcaggggctacatgggcctagatgacatcctgcttctcagctacccc
tgcgcaaaagccccgcacttctctcgcctgggcgatgtggaggtcaatgccggccagaac
gcgtctttccagtgtatggcggcaggacgggctgctgaggccgagcgcttccttctccag
cggcagagtggggcgctggtgcccgcggccggtgtgcggcacatcagccaccggcgcttt
ctggccaccttcccgctggccgcggtcagccgcgcagagcaggacctgtaccgctgcgtg
tcccaggccccgcgcggcgcgggtgtctctaacttcgcggagcttatcgtcaaggagccc
cccactcccatcgcacccccgcagctgctgcgtgcgggccccacctatcttatcatccag
ctcaacaccaactccatcatcggcgatgggccgattgtgcgcaaggagatcgagtaccgc
atggcgcgtggcccatgggccgaggtgcatgcagtcagcctgcagacctacaagctgtgg
caccttgaccctgacaccgagtatgaaatcagtgtgctgctcacgcgtcccggagatggc
ggcactggccgcccaggtcctccactcctcagccggaccaagtgtgcagagcccatgcgg
gcacccaaaggcctggctttcgctgagattttggctcgccagctgaccctgcagtgggaa
ccgctgggctacaacgtgacacgctgccacacctacacggtgtccctgtgctattactac
accctgggcagcagccacaaccagaccgtccgcgagtgtgtcaagatggagcggggcgtc
aaccgctacaccatcaagaacctgctgccctaccgggacgtccacgtacgcctggtcctc
actaaccccgaggggcgcaaggagggcaaggaggtcacctttcagactgatgaggatgtg
cctggtgggattgcggctgagtccttgaccttcacgccactggaggacatgatcttcctc
aagtgggaggagccccaggaacccaacggcctcatcactcagtatgagatcagctaccag
agcatcgagtcctcagaccctgcagtgaacgtgccgggcccccggcgtaccatctccaag
ctccgcaatgagacctaccacgtcttctcgaacctgcacccaggcaccacctacctgttc
tccgtgagggctcgcacgggcaaaggctttggccaggcagcgctcactgagatcaccacc
aacatctcggctcccagctttgactatgctgacatgccggcacccctgggcgagtcggag
aacaccatcaccgtgctcctgaggcctgctcagggccgtggcgcgcctatcagtgtgtac
caggtaattgtggaggaggatcggccgcggcggctgcggcgggagccaggtggccaggac
tgcttcccagtgcctctgaccttcgaggcggcgctggctcgtggcctaatgcactacttt
ggggccgaactggcggccagcagtctgcctgaggccatgcccttcaccgtgggtgacaac
cagacctaccgtggtttttggaatccaccacttgagcccaggaaggcctacctcatctac
ttccaggcagcaagccacctgaaaggggaaacccggctgaactgcatccgaatcgccagg
aaagctgcctgcaaggaaagcaagcggcccctggaggtgtcgcagaagtcggaggagatg
gggctcatcctgggcatctgtgcagggggacttgctgtcctcatcctcctcctgggagcc
atcattgtcatcatccgcaaggggagagaccgctatgcctactcctactacccgaagcca
gtgaacatgaccaaggccactgtcaactaccgccaggagaagacgcacatgatgagcgcc
gtggaccggagcttcacggaccagagcaccctgcaggaggacgagcggctgggcctgtcc
ttcatggacgcccctggctacagcccccggggagaccagcgcagcattggagtcaccgag
gccagcagcctcctggggggctcaccacggcgtccgtgtggccggaagggctccccgtac
cacacggggcagctgcaccctgcagtgcgggtggccgacctcctgcagcacatcaaccag
atgaagacagccgagggctatggcttcaagcaggagtacgagagcttctttgagggctgg
gatgccaccaagaagaaggacaagctgaagggaggccggcaggagcctgtgcctgcctat
gaccggcaccgcgtgaagctccacccgatgctgggagaccccagtgccgactacattaat
gccaactacatcgacattcggataaaccgagaaggttaccacaggtcaaaccacttcata
gccacacaagggccaaagcccgagatgatctatgacttctggcgcatggtgtggcaagag
cactgctcaagcatcgtcatgatcaccaagctggtggaggtgggcagggtaaagtgctca
cggtattggccagaggactcagacatgtacggggacatcaagatcacactggtgaagacg
gagacgctggctgagtacgtggtgcgcacctttgccctggagaggaggggctactctgcc
cggcacgaggtccgccagttccacttcacagcgtggccagagcacggtgtcccctaccat
gccaccgggctgctggcctttatcaggcgcgtgaaggcctccaccccacccgatgccggg
cccatcgtcatccactgcagcgctggcactggccgcacaggttgttacatcgtcctggat
gtgatgctggacatggcggagtgtgagggtgtcgtggacatttacaactgcgtgaagacc
ctctgctcccggcgcgtcaacatgatccagaccgaggagcagtacatcttcatccatgat
gcaatcctggaggcctgcctgtgtggggagaccaccatccctgtcaacgagttcaaggcc
acttacaaggagatgatccgcattgaccctcagagcaattcctcccagctgcgggaagag
ttccagacgctgaactcggtcacgccgccgctggacgtggaggagtgcagcatcgcgctg
ctgccccggaaccgcgacaagaaccgcagcatggacgtcctgccgcccgaccgctgcctg
cccttcctcatctccaccgacggggaccccaacaactacatcaacgcagccctgactgac
agctacacgcggagtgcggccttcatcgtgaccctgcaccccctgcagagtaccacccct
gacttctggcgcctggtctacgactacgggtgcacctccatcgtcatgctcaaccagctg
aaccagtccaactccgcctggccctgcctacagtactggccggagccgggccggcagcag
tacggcctcatggaggtggagttcgtgtcaggcactgcggatgaggacttggtggcccga
gtgttccgggtgcagaacatctctcggctgcaggaggggcacctgctggtgcggcacttc
cagttcctgcgctggtctgcctaccgggacacgcctgactccaagaaggccttcctgcac
ctgctggctgaggtggacaagtggcaggcggagagtggggacggacgcaccatcgtccac
tgcctaaatggaggaggccgcagcggcaccttctgcgcctgcgccacggtcctggagatg
atccgctgccacagcctggtggatgttttctttgctgccaaaacgcttcggaactataaa
cccaatatggtggagacaatggatcagtaccacttttgctacgatgtggccctggagtac
ctggaggctctggagtcaagatag
DBGET
integrated database retrieval system
