Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101962341
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Entry
101962341 CDS
T10664
Symbol
Rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101962341 (Rlim)
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101962341 (Rlim)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101962341 (Rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
101962341
NCBI-ProteinID:
XP_005337539
UniProt:
I3NDK7
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Position
X
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AA seq
611 aa
AA seq
DB search
MENSDSNDKGSGDQSAAQRRSQMDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEST
EEELLRRLQQIKEGPPPQNADENRGGGDSSDDVSNGDSIIDWLNSVRQTGNTTRSGQRGN
QSWRAVSRTNPNSGDFRFSLEINVNRNNGSQNPENENEPSVRRSSGENMENSSQRQVENA
RSESASARPSRSERNSTEALTGEAPPPRGQRRARSRSPDHRRTRARAERSRSPLHPMSEI
PRRSHHNISSQTFEHPLVNETEGSSRTRHHVTLRQQITGPELLSRGLFAASGTRNASQGA
SSSDTAGTGESTGSGQRPPTIVLDLQVRRVRPGEYRQRDSIASRTRSRSQTPNNTVTYES
ERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSY
FMYSDSDSEPSGSVPSGNMERAESRNGRGGSGGGSSSGSSSSSSPSSSSSGESSETSSEV
FEGSNEGSSSGSSGVRREGRHRAPVTFDESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQI
DNLAMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRA
VLASGNRESVV
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactcggattctaacgataaaggaagtggtgatcaatctgcagcacagcgcaga
agtcagatggaccgattggatcgagaagaagctttctatcagtttgtaaataacttgagt
gaagaagattataggcttatgagagataacaatttgctaggcaccccaggtgaaagtact
gaggaagagttgctaagaagactacaacaaattaaggagggtccaccaccccaaaacgca
gatgaaaatagaggtggaggagactcttcagatgatgtgtctaatggtgactctataata
gattggctgaactctgtcagacaaactggaaatacgacaagaagtgggcaaagaggaaac
cagtcttggagagcagtgagccggactaatccaaacagtggtgatttcagattcagttta
gagataaatgttaaccgtaataatgggagccaaaacccagagaatgaaaatgagccatct
gtgaggcgttctagtggagaaaatatggaaaacagtagccaaaggcaagtggaaaatgca
cgatctgaatcagcatctgcaagaccatctaggtctgaacgaaattcaactgaagcatta
acaggagaagctccacctcctagaggtcaaagacgggcaagaagcaggagcccagaccat
cggagaaccagagcaagagctgaaagaagtagatcaccccttcatccaatgagtgaaatt
ccaagaagatctcatcataatatctcatctcagacttttgagcaccctttagtaaatgag
acagagggaagttctagaacccggcaccatgtaacattgagacagcaaataactggacct
gagttgctaagtagaggtctttttgcagcttctggaacaagaaatgcctctcaaggagct
agttcttcagatacagctggcactggtgaatctacaggatcaggacagagacctccaacc
atagtccttgatcttcaagtaagaagagttcgtcctggagaatatcgccagagagatagt
atagctagcagaactcggtcgaggtctcagacaccaaacaatacggtcacttatgaaagt
gagcgaggaggtttcaggcgcacgttttcacgttctgagcgggcaggtgtgagaacctat
gtcagtaccatcaggattcccattcgtagaatcttaaatactggtttaagtgagactaca
tctgttgcaattcagaccatgttaaggcagataatgacaggttttggtgagctaagctac
tttatgtatagtgatagtgattcagagcctagtggctccgtcccaagtggaaatatggaa
agagcagagtcacggaatggaagagggggttctggtggtggtagcagttctggttccagt
tcaagttccagccctagttccagttctagtggtgaaagttcagaaactagctcagaggta
tttgaaggcagtaatgaaggaagctcatcaggctcatcaggtgtcaggcgagagggccga
catagggccccagtcacttttgatgaaagtggctctttgcctttccttagtctggctcag
tttttcctcttaaatgaggatgatgatgatcaacctagaggactcaccaaagaacagatt
gacaacttggcaatgagaagttttggtgaaaacgatgcattaaaaacctgtagtgtttgc
attacagaatatacagaaggcaacaaacttcgtaaactaccttgttcccatgagtaccat
gtccactgcatcgatcgctggttatctgaaaattctacctgtcctatttgtcgcagagca
gtcttagcttctggtaacagagaaagtgttgtgtaa
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