Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101962624
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Entry
101962624 CDS
T10664
Symbol
Ap4e1
Name
(RefSeq) AP-4 complex subunit epsilon-1
KO
K12400
AP-4 complex subunit epsilon-1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
101962624 (Ap4e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101962624 (Ap4e1)
Membrane trafficking [BR:
iti04131
]
Endosome - Golgi transport
Others
AP-4 complex
101962624 (Ap4e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP4E_app_platf
Coatomer_b_Cpla
Cnd1
INTS1_R4
ANAPC4
Motif
Other DBs
NCBI-GeneID:
101962624
NCBI-ProteinID:
XP_040131326
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MSDIVEKTLTALPGLFLQNQPAGGPAAPKASFSSRLGGLVRGITALTSKHEEEKLIQQEL
NNLKATVSAPTTTLKMMKECMVRLIYCEMLGYDASFGYIHAIKLAQQGNLLEKRVGYLAV
SLFLHENHELLLLLVNTVVKDLQSTNLVEVCMALTIVSQIFPREMIPAVLPLIEDKLQHS
KEIIRRKAVLALYKFYLIAPNQVQHIHIKFRKALCDRDVGVMAASLHIYLRMIKENSSAY
KDLTGSFVTILKQVVGGKLPVDFNYHSVPAPWLQIQLLRILGLLGKDDQRTSELMYDVLD
ESLRRAELNHNVTYAILFECVHTVYSIYPKSELLEKAAKCIGKFVLSPKINLKYLGLKAL
TYVIQQDPTLALQHQMTIIECLDHPDPIIKRETLELLYRITNAQNVTVIVQKMLEYLHQS
KEEYIIVNLVGKIAELAEKYAPDNAWFIQTMNAVFSVGGDVMHPDIPNNFLRLLAEGFDD
ETEDQHLRLYAVQSYLTLLDMENAFYPQRFLQVMSWVLGEYSYLLEKEKPEDVITRLYKL
LMNDSISSETKAWLFAAVIKLTPQAHSSNLVERLIQEFTISLDTCMRQHAFELKYLHENI
ELMKSLFPVDKSCEEMVVDASLSFLDGFVAEGLSQGAAPYKPHHQRQEEKLSQEKGDFFH
EFITCIRHGVFDNVFTLWNDYHSPLLNSLAFLIYFPRTSSLKLEGIKKLWGKEGYLPKKE
SKIGDEVEAPPIPQENLTIENMDQVITKRDQSQVLTQSKEEKEKQLLASSLFVGLGSEGT
INLLGKADTVSHKFRRKSKGKEAQREETTSAHSVTCSSLSSLSKVTCENNYLNTLQGKED
KEFKKFSFSSQLLDSESLTELPLVEKLSDCSLSAPSLFADNDMEIFHPPPSTAASVAKGI
SLASSLLEETTEYMHSNLMEVCNNEAVSISSYKIWKDDCLLMVWSVASKSGSELKSANLE
IFPAENFKITEQLGCCLPVVEAESTRNFQYSVHLEKPFTEGNLSGFINYQLMDTHSVQLE
FSINLSLLDFIRPLKISTEDFGKLWLSFANDVKQNIKTSESQAALPSALKTLQQKLRLHV
IDIIGNEGLLACQMLPSVPCLLHCRVHTNVIALWFRSSCSSLPDYLSYQCQKVMEGS
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatcgtggagaagacgctgacggcgctgccgggactgtttctgcagaaccag
ccggctggcgggcccgcggcccccaaggcgtccttctcctcgaggctgggcggcctagtc
cgcggcattaccgctctcacttccaagcacgaagaagagaaattaatccagcaggaactg
aataatctgaaagcaactgtttctgctcctactaccacactcaaaatgatgaaggaatgt
atggtgagacttatatattgtgaaatgcttggatatgatgcttcttttggctatatacat
gcaatcaagttggctcaacaaggaaacctcttagaaaaaagagtaggttatttggctgtt
tctttatttctacatgaaaaccatgaactgttgcttctccttgtgaatacagtagtaaag
gacttacagagcactaacctggtagaagtatgtatggcacttactatcgtcagccagatt
ttccctcgagaaatgattccagctgttcttccattaatagaagataaacttcagcattcc
aaggagattatacgaagaaaagctgttctggcattatacaaattctatctcattgctcct
aatcaagtacaacatatccacattaagtttcggaaggcactttgtgacagagatgttggg
gtcatggctgcttctttgcacatataccttaggatgattaaggagaattcatctgcatat
aaagacttgactgggagttttgtaactattttaaagcaagtagttggaggaaagctccca
gtagatttcaattaccacagtgtaccagcaccatggttacaaatccagctcttgagaata
ctgggacttctaggaaaagacgatcaaaggacaagtgaattaatgtatgatgttcttgat
gaatccttacgaagagctgagttaaatcacaatgtcacttatgctattctgtttgaatgc
gtacatacagtctattctatttatcctaagtcagaattacttgagaaggctgctaagtgc
attggaaaatttgttctctcccctaaaatcaatcttaaatatttaggactgaaggctctt
acctatgttattcaacaggatcctactctggctcttcagcaccagatgacaataattgaa
tgcttagaccatcctgatcccattattaagagagagactctggaacttctttacagaatt
acaaatgcacagaatgtaacagttattgtccagaagatgcttgaatatttacatcaaagc
aaagaagagtatatcattgtcaatttggttggcaaaatagctgagctggctgagaaatat
gctcctgataatgcatggtttattcaaacaatgaatgctgtgttttcagtgggaggagat
gtaatgcatcctgatattcccaataacttcctgagactgctagcagaaggttttgatgat
gaaacagaagatcagcacttgaggctttatgcagttcagtcttatcttactttactagat
atggaaaatgcattttatccacagagatttcttcaagttatgagttgggtgttaggagag
tattcctacctcttagaaaaggaaaagccagaggatgttataactaggctttacaagtta
cttatgaatgactccatttcttcagaaacaaaagcctggctgtttgctgctgtgatcaag
ttgacaccccaagcacattcttctaatctagttgagaggttaatccaggaatttaccata
tctttggatacttgtatgagacagcatgcatttgaattaaaatatttgcatgaaaatata
gaacttatgaagagtttgtttccagttgataagagttgtgaagaaatggtggtagatgct
tccttatcttttctcgatggttttgtggctgaaggactcagtcagggggcagcaccttat
aaacctcatcaccaacgccaagaggaaaagctttctcaggaaaaaggtgatttttttcat
gagtttataacatgtatacgacatggtgtttttgataatgtatttacattgtggaatgat
tatcacagtccattattaaattcacttgctttccttatctatttccctagaacaagtagc
ttgaagctagaaggtataaagaaattgtggggaaaagagggctatcttcctaagaaggaa
agcaaaattggtgatgaagtggaagctccacctattcctcaagagaatttaacaatagag
aatatggatcaagttataacaaaaagggatcagtctcaagtgcttacacaatctaaagag
gagaaagaaaagcagctgttggcttcatcattatttgttgggctaggatcagaaggtaca
atcaatttgctgggaaaagcagacacagtgtctcacaagttcagaaggaaatcaaaaggc
aaggaagcccaaagagaagaaacaaccagtgctcatagtgtgacctgttcttcccttagt
tctttatcaaaggtgacctgtgaaaataattacttgaatactttgcaagggaaagaagac
aaagaattcaagaaattttctttcagctcacaacttttggattctgagtctctcacagaa
ctgcccttggttgagaaactctcagattgcagcctgtctgcaccttctttgtttgctgat
aatgacatggaaatttttcatcctcctccatctactgcagcttcagttgccaagggaatc
tctttagcttcttctttgttggaagaaactactgagtacatgcattcaaatcttatggag
gtctgtaataatgaagctgtatcaatatcttcttacaagatttggaaagatgattgtttg
ttaatggtctggtcagttgctagtaagagtggttccgaattgaaaagtgctaacttagaa
atttttcctgcagaaaatttcaagatcactgaacaacttggatgttgtttgcctgtagtg
gaagcagaaagcaccagaaactttcaatacagtgtacacttggaaaagccttttacagaa
ggaaatctttctggctttataaattatcaattgatggatactcattctgttcagctggaa
ttttccataaacttatcactgttagatttcattagaccattaaaaatctcaactgaagac
tttggcaaactctggttatcctttgcaaatgatgtgaagcaaaatataaaaacatcagaa
tctcaagctgctctgccttctgccctaaaaacactgcaacagaaactgagacttcatgtt
attgacattataggcaatgaggggctattggcctgtcagatgctcccatccgttccctgc
ttactgcattgccgagttcatactaatgtaatagctctgtggttcagatcctcttgctct
tctcttccggactatttatcatatcagtgtcaaaaggtgatggagggatcctag
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