KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101962842
Entry
101962842         CDS       T10664                                 
Symbol
Cacna1i
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I
  KO
K04856  voltage-dependent calcium channel T type alpha-1I
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04010  MAPK signaling pathway
iti04020  Calcium signaling pathway
iti04713  Circadian entrainment
iti04925  Aldosterone synthesis and secretion
iti04927  Cortisol synthesis and secretion
iti04929  GnRH secretion
iti04934  Cushing syndrome
Brite
Ion channels [BR:iti04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   101962842 (Cacna1i)
SSDB
Other DBs
NCBI-GeneID: 101962842
NCBI-ProteinID: XP_040137730
LinkDB
Position
Unknown
AA seq 1829 aa
MGLWLLDGGSRGGGVHFPYLTPISRVAVMPVSTWPDWPSLCTSVLLRGVAGWAGWRGPLG
PGPGPISLASSLPHPLLSLSRMVEYSLDLQNINLSAIRTVRVLRPLKAINRVPSMRILVN
LLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCFLEENFTLWARVLTSLNTVSW
SVSRGRRGCPTRAACARPGAHQALPSRPRCRLQVITLEGWVEIMYYVMDAHSFYNFIYFI
LLIIVGSFFMINLCLVVIATQFSETKQREHRLMLEQRQRYLSSSTVASYAEPGDCYEEIF
QYVCHILRKAKRRTLGLYQALQSRRQALGPGAPAPARPGPHAKDPRHCKLCPRHSALDPT
PHTLVQPISAMLASDPTSCPHCQHGAGRRSSGPGSTDSGQEGSGSGGSSGSEAEADGDGP
RSSEDGGSSGLGKEDEEGQVGAVRLCGDVWRETRAKLRGIVDSKYFNRGIMMAILVNTVS
MGIEHHEQPEELTNILEICNVVFTSMFALEMILKLAAFGLFDYLRNPYNIFDSIIVIISI
WEIVGQADGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIF
SILGMHIFGCKFSLRTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSP
WASLYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSDEDQSSSNMEEYDKFQEALD
SSGDPKLCPIPLTPNGHLDPSLPLGGHLGPTGAVGPASRLSLQPDPMLVALDSRKSSVMS
LGRMSYDQRSLSSTRSSYYGPWGRSGAWASRRSSWNSLKHKPPSAEHESLLSAERSGARA
CEGAREEGPPRAAPLHAPHAHHVHHGPHLAHRHRHHRRTLSLDTRDSVDLTELLPAMGLH
PRAAWRAAGMAPGHEDCNGRMPNIAKDVFTKMDDGRDRGEDEEEIDYVYKPDWCEVREDW
SVYLFSPENRFRVLCQTIIAHKLFDYVVLAFIFLNCITIALERPQIEAGSTERIFLTVSN
YIFTAIFVGEMTLKVALGFTFTPSSGTPAPPADCHWPVSQRPPLGWAPGTRRGQRHAPSP
GVTPSPERRMQGVFVSIIDIVVSLASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLV
VETLISSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYHCLGVDTRNITNRSDCVAANYR
WVHHKYNFDNLGQALMSLFVLASKDGWVNIMYNGLDAVAVDQQPVTNHNPWMLLYFISFL
LIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRSEWAARGPGCVLS
PSQAPVTPADAPLEPRLGPDSSLQGAGRNKECDPGGGLRPFVPASASLETALKYCNYMFT
TVFVLEAVLKLVAFGLRRFFKDRWNQLDLAIVLLSVMGITLEEIEINAALPINPTIIRIM
RVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCN
EENPCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRDCTQEEHSCLSSLQFVSP
LYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEDAEMDAEIELEMAHGLGPSPRPPPS
SPGALGRGPGGAGGGGDAEGRLCRRCYSPAQENLWLDSVSLIIKDSLEGELTIIDNLSGS
IFHHYASPAGCEKCHHDQQEVVQLAETEAFSLNSDKSSSILLGDDLSLEDPAACPPGPKD
SKGELDPLEPTRVGDLGECFFPLSNMAMSTGAENFLCEMEAIPFNPVRSWLKHESSQAPP
TPYSPDASSPLLTMPAEFFHPAVSASQKT
NT seq 5490 nt   +upstreamnt  +downstreamnt
atggggctttggctgctggacgggggctcccgaggaggaggggtccactttccttacctc
acccccatttctcgtgtggctgtgatgcccgtctccacctggccagactggccatccctc
tgcacctcggtcctcctccgaggtgtggctgggtgggccgggtggcggggacccctgggg
ccaggccctggccccatctctcttgcgtcctccctccctcatcctctcctctctctctcc
aggatggtcgagtactcgctggaccttcagaacatcaacctgtcggccatccgcaccgtg
cgtgtcctcaggcccctcaaagccatcaaccgcgtgccaagcatgcggatcctggtgaac
ctgctgctggacacgctgcccatgctggggaacgtcctcctgctctgcttcttcgtcttc
ttcatcttcggcatcatcggggtgcagctgtgggcggggctgctgcgtaaccgctgcttc
ctggaggagaacttcaccctgtgggcacgtgtcctcacctctctgaacaccgtttcctgg
tctgtatcgcgtggacggagaggctgccctacgagggcggcgtgtgcgcgtcctggtgca
catcaggctctcccctctcgccctcggtgccggctgcaggtgatcaccctggaaggctgg
gtggagatcatgtactacgtgatggacgcccactccttctacaacttcatctactttatc
ctgctcatcatagtgggctccttcttcatgatcaacctgtgcctcgttgtcatagcgacc
cagttctcggagaccaagcagcgggagcaccggctgatgctggagcagcggcagcgctac
ctgtcctccagcacggtggccagctacgccgagcccggcgactgctacgaggagatcttc
cagtacgtctgccacatcctgcgcaaggccaagcgtcgcaccctgggcctctaccaggcc
ctgcagagccggcgccaggccctgggccccggggcacctgcccctgccaggcccgggccc
cacgccaaggaccccaggcactgcaagctgtgcccgagacacagcgccctggaccccacg
ccccacacgctggtgcagcccatctcagccatgctggcctccgaccccaccagctgcccg
cactgccagcacggggcgggccggcggtcctcgggtcccggcagcaccgactcgggccag
gagggctcaggctccggtggctccagtggcagcgaggctgaagccgatggggacggtccc
cggagcagcgaggacgggggctcctccggcctaggcaaagaggacgaggaggggcaggtg
ggggcagtccggctgtgtggggacgtgtggcgggagacgcgggccaagcttcggggcatc
gtggacagcaagtacttcaaccggggcatcatgatggccatcctggtcaacaccgtcagc
atgggcatcgagcaccatgagcagcccgaggagctgaccaacatcttggagatctgcaac
gtggtcttcaccagcatgttcgccctggagatgatcctgaagctggccgccttcgggctc
tttgattacctgcggaacccctacaacatcttcgacagcatcatcgtcatcatcagcatc
tgggagatcgtggggcaggcggacggcgggctgtcagtgctgcgcaccttccggctgctg
cgggtgctgaagctggtgcgcttcatgcccgcgctgcggcgccagctggtggtgctcatg
aagaccatggacaacgtggccaccttctgcatgctgctcatgctcttcatcttcatcttc
agcatccttgggatgcacatctttggctgcaaattcagcctccgcacggatacgggagac
acggttcctgacaggaagaactttgactccctgctctgggccattgtcacagtgttccag
atcctcacccaggaggactggaacgtcgtcctctacaatggcatggcctccacttccccc
tgggcctccctttactttgttgctctcatgaccttcggcaactatgtcctcttcaacttg
ctggtggccatcctggtggagggtttccaggccgagggggacgccaaccgctcctactca
gatgaggaccagagctcatccaacatggaagagtatgacaagttccaggaggccctggac
agcagcggagatcccaagctctgcccaatccccttgacccccaatgggcacctggaccct
agtctcccattgggcggacacctaggtcctactggggctgtgggccctgcgtcccgcctc
tcgctgcagccagaccccatgctggtggccctggactcccgcaagagcagcgtcatgtcc
ctggggcggatgagctatgatcagcgctccctgtccagcacccggagctcctactacgga
ccttggggccgcagcggggcctgggccagccgccgctccagctggaacagcctcaagcac
aagccgccctcggctgagcacgagtccctgctctcggcggagcgcagtggcgctcgggcc
tgcgagggtgcccgggaggaggggcctccgcgcgctgcgccgctgcatgccccgcacgcc
caccacgtgcaccatgggccccacctggcgcaccgtcatcgccaccaccgccggacgctg
tccctcgacactcgggactcggtggacctgaccgagcttttgcccgccatgggcctccac
cccagggccgcctggagggcggcgggcatggcccccgggcacgaggactgcaacggcagg
atgcccaatatcgccaaggacgtgttcaccaagatggacgacggccgggatcgcggggag
gacgaggaggagatcgactacgtctacaagcctgactggtgcgaggtccgcgaggactgg
tcggtctacctcttctccccggagaacaggttccgggtcctgtgtcagaccatcatcgcc
cacaagctctttgactacgtggtcctggccttcatcttccttaactgcatcaccatcgcc
ctggagaggccccagatagaggccggcagcactgaacgcatcttcctcacggtgtccaac
tacatcttcacggccatcttcgtgggcgaaatgacactgaaggttgctctgggcttcacc
ttcactcccagctcggggacccccgcccctcccgcagattgtcactggcctgtcagtcag
cgcccgcccctgggttgggctcctgggacccggaggggtcagcggcatgccccctctcca
ggagtcacaccctcgccagaaaggcgaatgcagggagtcttcgtgtccatcatcgacatc
gtggtgtccttagcctcggctgggggagccaagatcttgggggtcctccgggtcctgcgg
ctcctgcgcaccctacgccctctgcgggtcatcagccgggcccctggcctgaagctggtg
gtggagacgctcatctcctccctcaaacccattgggaacatcgtcctgatctgctgtgcc
ttcttcatcatctttggcatcttgggggtgcagctcttcaagggcaagttctaccactgc
ctgggcgtggacacccgcaacatcaccaaccgctctgactgcgtggctgccaactaccgc
tgggtccatcacaagtacaacttcgataacctgggccaggctctgatgtccctctttgtc
ctggcctccaaggacggctgggtgaacatcatgtacaacggactagatgccgtggctgtg
gaccagcagcctgtgaccaaccacaacccctggatgctgctgtacttcatctccttcctg
ctcatcgtcagcttcttcgtgctcaacatgttcgtgggcgtggtggtggagaacttccac
aagtgccggcagcaccaggaggcggaggaggcgcggcggcgcgaggagaagcggctgcgg
cgcctggagaagaagcggcgcagtgagtgggcagcgcgggggccggggtgtgtgctgtcg
cccagccaggcccccgtgaccccagctgatgctcctctggaaccgaggcttgggcctgac
tccagcctccagggagctggaaggaacaaagaatgtgatcccggtggtgggctgcggccc
tttgtccctgcttccgcctccctggagacagccctcaagtactgcaactacatgtttacc
acggtctttgtactggaggctgtgctgaagctggtggcatttggcctgagacgtttcttt
aaggaccggtggaaccagctggacctggccatcgtgctgctgtccgtcatgggcatcacg
ctggaggagattgagatcaacgccgccctgcccatcaaccccaccatcatccgcatcatg
cgggttctgcgcattgcccgggtgctgaagctactgaagatggccacggggatgcgggcc
ctgctggacaccgtggtgcaggctctgccccaggtgggcaacctgggcctcctctttatg
ctgctcttcttcatctatgctgccctgggggtggagctctttgggaagctggtctgcaat
gaggagaacccttgcgagggcatgagccggcacgccacctttgagaacttcggcatggcc
ttcctcacgctcttccaggtctccacgggcgacaactggaacgggatcatgaaggacacg
ctgcgggactgcacgcaggaggagcacagctgcctgagcagcctgcagttcgtgtcgccg
ctgtacttcgtcagcttcgtgctcaccgcgcagttcgtgctcatcaacgtggtggtggcc
gtgctcatgaaacacctggacgacagcaacaaggaggcgcaggaggacgccgagatggac
gctgagatcgagctggagatggcacatggcctgggccccagcccgcggccgccccccagc
tccccaggggccctgggccgagggccagggggggcgggcggcgggggtgacgccgagggc
cgcctgtgccggcgctgctactccccagcccaggagaacctgtggctggacagcgtctct
ttaatcatcaaggactccttggagggggagctgaccatcatcgacaacctgtccggctcc
atcttccaccactacgcctcacctgccggctgcgagaagtgtcaccatgaccaacaggag
gtagtgcagctggccgagacggaggccttctccctgaactcggacaagtcctcgtccatc
ctgctgggggacgacctgagcctcgaggaccccgcggcctgcccgcctggccccaaagac
agcaagggtgagctggacccacttgagcccacacgggtcggggacctgggcgagtgcttc
ttccccttgtccaacatggccatgtccacgggtgcagagaacttcctgtgtgagatggag
gcaatccccttcaaccctgtccggtcctggctgaaacatgagagcagccaagcgcccccc
accccctattccccagatgcctccagcccactgctgaccatgcctgccgagttcttccac
ccggctgtgtctgccagccagaaaacctga

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