Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101962885
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Entry
101962885 CDS
T10664
Symbol
Tubb6
Name
(RefSeq) tubulin beta-6 chain
KO
K07375
tubulin beta
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04145
Phagosome
iti04517
IgSF CAM signaling
iti04540
Gap junction
iti04814
Motor proteins
iti05010
Alzheimer disease
iti05012
Parkinson disease
iti05014
Amyotrophic lateral sclerosis
iti05016
Huntington disease
iti05020
Prion disease
iti05022
Pathways of neurodegeneration - multiple diseases
iti05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101962885 (Tubb6)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101962885 (Tubb6)
09144 Cellular community - eukaryotes
04540 Gap junction
101962885 (Tubb6)
09142 Cell motility
04814 Motor proteins
101962885 (Tubb6)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101962885 (Tubb6)
09164 Neurodegenerative disease
05010 Alzheimer disease
101962885 (Tubb6)
05012 Parkinson disease
101962885 (Tubb6)
05014 Amyotrophic lateral sclerosis
101962885 (Tubb6)
05016 Huntington disease
101962885 (Tubb6)
05020 Prion disease
101962885 (Tubb6)
05022 Pathways of neurodegeneration - multiple diseases
101962885 (Tubb6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
iti03036
]
101962885 (Tubb6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
iti04812
]
101962885 (Tubb6)
04147 Exosome [BR:
iti04147
]
101962885 (Tubb6)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
101962885 (Tubb6)
Cytoskeleton proteins [BR:
iti04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
101962885 (Tubb6)
Exosome [BR:
iti04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101962885 (Tubb6)
Exosomal proteins of colorectal cancer cells
101962885 (Tubb6)
Exosomal proteins of bladder cancer cells
101962885 (Tubb6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
101962885
NCBI-ProteinID:
XP_005334919
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVVRKECEHCDCLQG
FQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQL
VENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRK
LAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT
VATVFRGLMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNST
AIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQDATVND
GEEAFEDEEEEINE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgtgaggtccggaccctttgggcagctcttccgacctgataacttcatcttt
ggacagacgggcgccggcaacaactgggccaagggccactacaccgagggcgcagagctg
gtggactcggtcctggatgtggtgcgcaaggagtgtgagcactgcgactgcctgcagggc
tttcagctgacccactcgctgggcggcggcacgggctcgggcatgggcacactgctcatc
agcaagatccgcgaggagtaccccgaccgcatcatgaacaccttcagcgtcatgccctca
cccaaggtatctgacacggtggtggagccctacaacgccacgctgtcggtgcaccagctg
gtggagaacacggatgagacctactgcatcgacaacgaggcgctgtacgacatctgcttc
cgcaccctcaagctgaccactcctacctacggggaccttaaccatctggtgtcggccacc
atgagcggggtcaccacctcgctgcgcttcccgggtcagctcaacgccgacctgcggaag
ctggccgtgaacatggtgccctttccgcgcctgcacttcttcatgccgggcttcgcgcca
ctgaccgcccgaggcagccagcagtaccgcgcgctgacagtgcccgagctcactcagcag
atgttcgacgccaagaacatgatggctgcctgtgacccacgccatggccgctatttgacc
gtggccaccgttttccgtggcctcatgtccatgaaggaggtggatgagcagatgctggcc
atccagaacaagaacagcagctactttgtggagtggatccccaacaacgtcaaggtggct
gtgtgcgacattccgccgcgtggcctgaagatggcctccacctttattggcaacagcaca
gccatccaggagctgttcaagcgcatctcggagcagttctcagccatgttccgccgcaag
gccttcctgcattggttcaccggtgagggcatggacgagatggagttcaccgaggccgag
agcaacatgaacgacttggtgtccgaataccagcagtaccaggatgctactgtaaacgat
ggagaggaagcttttgaagatgaggaagaggagatcaatgaataa
DBGET
integrated database retrieval system
