Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101962971
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Entry
101962971 CDS
T10664
Symbol
Fn1
Name
(RefSeq) fibronectin isoform X1
KO
K05717
fibronectin 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04151
PI3K-Akt signaling pathway
iti04510
Focal adhesion
iti04512
ECM-receptor interaction
iti04810
Regulation of actin cytoskeleton
iti04820
Cytoskeleton in muscle cells
iti04933
AGE-RAGE signaling pathway in diabetic complications
iti05100
Bacterial invasion of epithelial cells
iti05135
Yersinia infection
iti05146
Amoebiasis
iti05165
Human papillomavirus infection
iti05200
Pathways in cancer
iti05205
Proteoglycans in cancer
iti05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101962971 (Fn1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101962971 (Fn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101962971 (Fn1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101962971 (Fn1)
04810 Regulation of actin cytoskeleton
101962971 (Fn1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101962971 (Fn1)
05205 Proteoglycans in cancer
101962971 (Fn1)
09162 Cancer: specific types
05222 Small cell lung cancer
101962971 (Fn1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101962971 (Fn1)
09171 Infectious disease: bacterial
05135 Yersinia infection
101962971 (Fn1)
05100 Bacterial invasion of epithelial cells
101962971 (Fn1)
09174 Infectious disease: parasitic
05146 Amoebiasis
101962971 (Fn1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101962971 (Fn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101962971 (Fn1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
iti04147
]
101962971 (Fn1)
00536 Glycosaminoglycan binding proteins [BR:
iti00536
]
101962971 (Fn1)
04990 Domain-containing proteins not elsewhere classified [BR:
iti04990
]
101962971 (Fn1)
Membrane trafficking [BR:
iti04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
101962971 (Fn1)
Exosome [BR:
iti04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
101962971 (Fn1)
Glycosaminoglycan binding proteins [BR:
iti00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101962971 (Fn1)
Domain-containing proteins not elsewhere classified [BR:
iti04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
101962971 (Fn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
fn2
Fn3_Dep-1_2nd
NDNF
FN3_Tor_3rd
Motif
Other DBs
NCBI-GeneID:
101962971
NCBI-ProteinID:
XP_005331898
UniProt:
I3M114
LinkDB
All DBs
Position
Unknown
AA seq
2474 aa
AA seq
DB search
MLRGPGPQLLLLLAVLCLGTAVPSTGASKSKRQAQQIVQPQSPVTVAQSKPGCFDNGKHY
QINQQWERTYLGNALVCTCYGGSRGFNCESKPEPEETCFDKYTGNTYRVGDTYERPKDSM
IWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWTC
KPIAEKCFDNAAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQDTRSS
YKIGDTWSKKDNRGNLLQCICTGNGRGEWKCERHTSLQATSSGSGSITDVRKAIYQPPTH
PQPVPYGHCVTDSGVIYSVGMQWLKTQGNKQMLCTCLGNGISCQETAVTQTFGGNSNGEP
CVLPFVYNGRTFYSCTTEGRQDGHLWCSTTWNYEQDQKYSFCTDHTVLVQTRGGNSNGAL
CHFPFLYNNRNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFCPMAAHEEICTTNEGVMYR
IGDQWDKQHDMGHMMRCTCIGNGRGEWTCVAYSKLRDQCIVDDITYNVNDTFHKRHEEGH
MLNCTCFGQGRGRWQCDPIDQCQDSETRTFYQIGDSWEKHVHGIRYQCYCYGRGIGEWHC
QPLQAYPGTSGPVQVIITETPSQPNSHPIHWNAPEPSHITKYILRWRPKNSVGRWKEATI
PGHLNSYVIKGLTPGVIYEGQLISFQQYGHREVTRFDFTTTSSSTPKGTSNTVTGETTPL
SPVVATSESVTEITASSFVVSWVSASDTLSGFLVVYELSEEGAERRYLELPSTATSVSIP
DLLPGRKYIVNVYQIAEDGEQSLILSTSQTTAPDAPPDPTVGQVDDTSIVVRWSRPQAPI
TGYRIVYAPSEEGGSTELNLPETANSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQET
TGTPRSDKVPPPKDLQFVEVTDVKVTIMWTPPDSAVTGYRVDVIPVNLPGEHGQRLPINR
NTFAEVTGLSPGATYYFKVFAVNQGRESKPLIAQQTTKLDAPTNLQFVNESDTSVLVTWT
PPRARISGYRLTVGLTRGGRPKQYNVGPSVSKYPLRNLQPGSEYTVTLVGIKGDQESPKA
TGVFSTLQPSSSIPPFNTEVTETTIVITWIPVPRIGFKLGVRPSQGGEAPREVTSDSGSI
VVSGLTPGVEYDYSVQVLRDGKEIEQPIVNRVVTPLSPPTNLHLEANPDTGELTVSWERS
TTPGITGYRITTTPTSGQQGNALEEMVRADQSSCTFENLSPGLEYNVSVYTVKDDKESVP
ISDTIIPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFVDS
SVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNVGPDTMRVTW
APPSSIELSNLLVRYSPVKNEDDVAELSISPSDNAVVLTNLLPGTEYLVSVSSVYEHHES
IPLKGRQKTRLDSPSGIDFSDITPNSFTVHWIAPRAAITGYWIRHHPEHSAGRPREDRVP
PSRNSITLTNLNPGTEYVVSIVALYGREESSPLIGQQSTVSDVPRDLEVIASTPTSVLIS
WEAPAVTVRYYRITYGETGGTSPVQEFTVPGSKSTATISDLKPGVDYTITVYAVTGRGDS
PASSKPISIDYRTEIDKPSQMQVTDVKDNSISVRWLPSSSPITGYRVTTIPKTGKGPSQT
RTAGPDQTEMTIEGLQPTVEYVVSVYAQNGKGESQPLVQTAVTNIDRPKGLAFTDVDVDS
IKIAWESPQGQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVALHD
DMESQPLIGTQSTAIPAPTNLRFTQITPTSFSAQWTPPNVQLTGYRIRVTPKDKKTGPMK
EINLAPDSTSVVVSGLMVATKYEVSVYALKDTLTSRPAQGIITTLENVSPPRRARVTDAT
ETTITINWRTKTETITGFQVDAIPANGQTPVQRTIGPDVRSYTITGLQPGTDYKIYLYTL
NDNAHSSPVVIDASTAIDAPSNLRFLTTTPNSLLVAWQPPRAKITGYIIKYEKPGSPPRE
VVPRPQPGVTEATITGLEPGTEYTIYIIALKNNQKSEPLIGRKKTDELPQLVTLPHPNLQ
GPEILDVPSTVPKTPFITSPGADNGNGIHLPGTSHRQPSFGQQMVIEEHGFRRTTPPTAV
TPVRHRPRPYSPTIDEIHVPRGEVDYHLYPHITELNPNASTGQEVLSQTTISWTPFQDSS
EYIISCQPIGTTEEPLQFRVPGTSTSATLTGLTRGATYNILVEAMKNLKRHKVLEEVVTV
GNPGPNQPIDDTCFDPYSASHYDIGDEWERISETGFKLTCQCLGFGSGHFRCDSSKWCYD
NGVNYKIGEKWTRRADTGEMLSCTCLGNGKGEFKCDPDGTTCYDDGKVYQVGERWQKEFL
GAICSCTCFGGQQGWLCDNCYRPGGSTVPEGPSSGHSPNQYTPRYHQRTNTNVDCPIECF
MPLDVQADKEDSRE
NT seq
7425 nt
NT seq
+upstream
nt +downstream
nt
atgctcaggggtcctgggccccagctgctgctgctgctggcggtcctgtgcctggggaca
gcggtgccctccactggggcctcgaagagcaagaggcaggctcagcaaatcgtgcaaccc
cagtcccccgtgactgtcgctcaaagtaagcctggttgttttgacaatggaaaacactat
cagataaaccaacagtgggagcgcacctacctaggcaatgccttggtgtgtacctgttat
ggagggagtcgaggtttcaactgcgagagcaaacctgagcctgaagagacttgttttgac
aagtatactgggaacacttaccgagtgggtgacacttatgagcgccctaaagattccatg
atttgggattgtacctgcatcggggccgggcgagggagaataagctgcacgattgcaaac
cgctgccacgaagggggtcagtcctacaagatcggtgacacctggaggagacctcatgag
actggtggttacatgttggagtgcgtgtgtcttggcaacgggaaaggagagtggacctgc
aagcctatagctgagaaatgttttgacaatgctgctgggacttcctatgttgttggggaa
acctgggaaaagccctatcaaggctggatgatggtggattgtacttgcctgggagaaggc
agcggacgcatcacttgcacctctagaaacagatgcaacgatcaggacacaaggtcatcc
tataaaattggagatacctggagcaagaaggataatcgaggaaacctgctgcagtgcatc
tgcacaggcaacggcagaggggagtggaagtgcgaaaggcacacatctctgcaggccacg
tcctctggctctggctccatcacagatgtccgaaaagccatttaccagcccccgactcac
ccccagcctgttccctatggtcactgtgtcacagacagtggtgtgatctactctgtgggg
atgcaatggctgaagacacaaggaaacaagcaaatgctttgcacttgcttgggcaatggc
atcagctgtcaggagacagcggtaacccagacttttggtggcaattcaaacggggagccg
tgcgtcttaccgttcgtctacaatggcaggactttctactcctgcaccacagaagggcga
caggatgggcatctttggtgcagcacgacttggaattatgaacaggatcagaaatactct
ttctgtacagaccatactgttttggttcaaactcgaggtggaaattccaatggtgccttg
tgccacttccccttcctgtacaacaaccgcaattacaccgattgtacttctgagggcagg
agagacaacatgaaatggtgcggaaccacacagaactatgatgctgaccagaagtttgga
ttctgccccatggctgcccatgaggaaatctgcacaaccaacgaaggagtcatgtatcgc
attggagaccagtgggataagcagcatgatatgggccacatgatgaggtgcacgtgtatt
gggaatggccgtggagaatggacatgtgtcgcctactccaagctccgagatcagtgcatt
gttgatgacatcacttacaacgtgaatgacacattccacaagcgacacgaagagggacac
atgctgaactgtacctgctttggtcagggccgaggccgatggcagtgtgatcccattgat
cagtgccaggattcagaaactcggacattttatcaaattggagactcatgggagaaacat
gtgcatggtatcaggtaccagtgctactgctatggccgtggcattggggagtggcactgc
cagcccttgcaggcctatccaggtacatctggtcctgtccaagtaattatcactgagacc
cccagtcagcccaactctcaccccatccattggaatgcaccagaaccatctcacatcacc
aagtacattctcaggtggagacctaaaaattctgtgggccgttggaaagaggctaccatt
cctggtcacttaaactcctacgtcatcaaaggcctgaccccaggagtgatatatgagggg
cagctcatcagttttcagcagtatggccacagagaagtgacacgcttcgacttcaccacc
accagcagcagcacccccaaagggaccagcaacaccgtgacaggagagacgacacctttg
tcaccggtggtggccacatctgaatctgtgactgaaatcactgccagcagctttgtggtc
tcatgggtctcagcttccgatactttgtctggattcctggtggtgtatgagctgagtgag
gagggagctgagcgacggtacctggaactcccgagcacggccacttctgtgagcatccct
gacctgcttcctggccgaaagtacattgtaaatgtctatcagatagccgaagacggggag
caaagtttgatcctgtcgacctcacagacaacagctcctgacgcccctcctgacccaact
gtgggccaagttgatgacacctccattgttgttcgctggagcagaccccaggcaccaatc
acaggctacagaatagtctatgcaccatcagaagagggcggtagcaccgagctcaacctc
cccgagactgccaactctgtcaccctcagtgacttgcagcctggagttcagtacaacatc
accatctatgccgtggaagaaaaccaggagagtactcctgtcttcatccagcaagaaacc
acgggcaccccacggtcagataaagttccccctcctaaagacctgcagtttgtggaagtg
acagacgtgaaggtcaccatcatgtggacaccccctgacagtgcagtgaccggctatcgt
gtggatgtgatccctgtcaacttgcctggggagcatgggcagaggctgcccattaacagg
aacacttttgcagaagtcacggggttgtcccccggggccacctattacttcaaggtcttt
gctgtgaaccaggggagggagagcaagcctctgattgcacaacagacaaccaaactggat
gctcccactaacctccaatttgtcaatgaaagtgacacaagtgtcctggtaacttggacc
ccacctcgggcccggatctcagggtaccgactgacggtgggcctgacccgaggaggccgg
cccaagcagtacaacgtggggccctctgtctccaagtaccctctgaggaacctgcagcct
gggtctgagtacactgtcaccctcgtaggtatcaaaggcgaccaagagagccccaaagcc
actggagtcttctctacattgcagccatcgagctccattccacctttcaacacagaggtc
accgagaccaccattgtgatcacatggatccctgttccaaggattgggtttaagctgggt
gtgcgaccaagccagggaggtgaggccccacgagaagtgacttcagactcaggaagcatt
gtcgtgtctggcttgactccaggagtggaatatgattatagcgtccaagtcctgagagat
gggaaagaaatcgaacagccgattgtcaacagagtggtgacaccactgtctccaccgaca
aacttgcacctggaggccaaccctgatactggcgagcttactgtgtcctgggagaggagc
accaccccaggtatcactggctatagaatcaccaccacccctacaagcggacagcagggt
aatgctttggaagaaatggttcgtgcggatcagagttcttgcacttttgaaaatctgagt
cccggcctggaatacaatgtcagtgtttacactgtcaaagatgacaaggaaagtgtccct
atctctgataccatcatcccagaggtgccccaactcactgacctaagctttgttgatata
accgattcaagcatcggcctgaggtggaccccgctaaactcgtccaccattattgggtac
cgcatcacagtagttgcagcaggagaagggatccctatttttgaagattttgtggactcc
tcagtaggatactacacagttacagggctggaacccggcattgactatgacatcagcgtt
atcactctcattaatggcggagagagtgcccctactacactgacacagcaaacggctgtc
cctcctcccacggacctgagattcaccaatgttggtccagacactatgcgtgtcacctgg
gcgcccccttcatctattgagctgagcaacctgttggtgcgctactcacctgtgaaaaac
gaggacgatgttgcagagttgtcgatttctccatcagacaacgcagtggtcttaacaaac
ctcctgcctgggaccgaatatttagtcagtgtttccagtgtctacgaacaccacgagagc
atacctcttaaaggaagacagaaaacacgtcttgattccccatctggcattgacttttct
gacatcactcccaactctttcaccgtccactggattgcgcctcgagctgccatcactggc
tactggattcgccatcatcctgagcatagtgccgggagaccccgagaagatagagtgccc
ccctctcggaattccatcaccctcaccaacctcaatccaggcacagaatatgtggtcagc
attgttgctctttatggcagagaggagagttcccccttgattggccaacagtcgacagtt
tctgatgtcccaagggacctggaagtcattgcctccacccccaccagcgtactgatcagc
tgggaagcccctgctgtcacagtgagatactataggatcacctatggagaaacaggagga
acgagccctgttcaggagttcactgtccctgggagcaagtccacagctaccatcagcgac
ctgaaacctggagtagattacaccatcacagtgtatgctgtcactggccgtggggacagc
ccagccagcagcaagccaatttccattgactatcgaacagaaattgacaagccatcccag
atgcaagtgactgatgttaaggataacagcattagtgtcaggtggctgccttcaagttct
ccaattactggttacagagtgaccaccattcccaaaacgggcaaaggaccatcacaaact
agaactgcaggtccagatcaaacagaaatgaccattgaaggcttgcagcccacagtggag
tatgtggttagtgtttatgctcagaatggaaaaggagaaagccagcccctggttcaaact
gcagtaaccaacattgatcgccctaaaggactggcattcactgatgtggatgtcgattcc
atcaaaattgcttgggaaagcccacaggggcaagtttccaggtacagggtgacctactca
agccctgaggatggaatccatgagctattccctgcacctgatggtgaagaagacactgca
gagctgcaaggcctcaggccgggttctgagtacacagtcagtgtggttgccttgcacgat
gatatggagagccagcccctgattggaacccagtccacagccatccctgctccaaccaac
ctgaggttcactcagattacaccaacaagctttagtgcccagtggacaccacccaatgtc
cagctcactggatatcggatacgagtgacccccaaagacaagaagaccggaccaatgaag
gaaatcaacctcgctcctgacagcacctctgtggttgtatcaggactcatggtggctacc
aaatatgaagtgagtgtctatgctcttaaggacacgctgaccagcagaccagctcaggga
atcatcactactctcgagaatgtcagccctcccagaagggctcgggtgacagatgctact
gagaccaccatcactattaactggcgaaccaagaccgagacaatcactggtttccaagtt
gatgccatcccagccaatggccagaccccagttcagagaaccatcggcccagatgtcaga
agctataccatcacaggtttgcaacccggcacggactacaagatctacctgtataccctg
aacgacaatgcccacagctcccccgtggtcatcgatgcctccactgccattgatgcacca
tccaacctgcgcttcctgaccaccacccccaactccttgctggtagcatggcagccgccc
cgtgccaagatcactggctatatcatcaaatatgagaagcctgggtcccctcccagagaa
gtggtccctcggccccaacctggtgtcactgaggccactattactggcctagaaccagga
accgagtacacaatctacatcattgccctgaagaacaaccagaagagtgagcccctgatt
gggaggaaaaagacagatgagcttccccaactggtaacccttcctcaccccaatcttcaa
ggaccagagatcttggatgtcccctccacagttccaaagaccccattcatcaccagccct
ggggctgacaatggaaacggtattcatcttcctggcacaagccatcggcagcccagtttt
gggcaacaaatggtcattgaggaacatggttttaggaggaccacaccacccacagcggtc
acccccgtaaggcataggccaagaccatactcgccgactatagatgagattcatgtcccc
aggggagaagtagactaccacctctaccctcacattacggagctcaatccaaatgcctct
acaggacaagaagttctctctcagacaaccatctcttggaccccgttccaggacagttct
gagtatatcatttcatgtcagcccattggcacgacagaagaacccttacagttccgagtt
cctggaacttccaccagtgccactctgacaggccttacccgaggggccacctacaacatc
ctagtggaggcaatgaaaaacctgaagaggcacaaggttctggaggaggttgtgactgtg
ggcaaccctggccccaaccaacctattgatgacacctgctttgacccctactcggcttcc
cattatgacattggagacgaatgggagcgaatatctgaaactggttttaaactcacgtgc
cagtgcttgggctttggcagtgggcatttcagatgtgattcatctaaatggtgctacgac
aatggtgtgaactacaagattggggagaagtggactcgcagggcagacaccggcgagatg
ctgagctgcacgtgcctgggcaacgggaaaggagagttcaagtgcgatcctgatgggaca
acatgctacgatgatgggaaggtttaccaggtgggagaacggtggcagaaggaattttta
ggtgccatttgttcctgcacatgctttggaggccagcagggctggctctgtgacaactgt
tacagaccaggtggttcaactgttcctgaaggcccctcctcaggtcactcccccaaccag
tatacaccgagatatcatcagagaacaaacactaatgttgattgcccaatcgagtgcttc
atgcctttagatgtgcaggctgacaaagaagattccagagagtaa
DBGET
integrated database retrieval system
