Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101962995
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Entry
101962995 CDS
T10664
Symbol
Nup54
Name
(RefSeq) nucleoporin p54 isoform X3
KO
K14308
nuclear pore complex protein Nup54
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03013
Nucleocytoplasmic transport
iti05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101962995 (Nup54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101962995 (Nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101962995 (Nup54)
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101962995 (Nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
101962995
NCBI-ProteinID:
XP_005337315
UniProt:
I3MDQ6
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MAFNFGAPSGTSGSAAATAAPAGGFGGFGTTSTTAGSAFSFSAPTNTGTTGLFGGTQNKG
FGFGTGFGTTTGTSTGLGTGLGTGLGFGGFNTQQQQQQQNTLGGLFSQPAQAPTQSNQLI
NTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGY
SCMPNNKDEDGLVVLVFNKKETDIRSQQQQLVESLHKILGGNQTLTVNVEGIKTLPDDQT
EVVIYVVERSPNGTSRRVPATTLYAHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLLQ
NPPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDI
SELQKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQ
CELNAPTQFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLI
SIIKDDLEDIKLVEHGLNEAIHVRGGVFS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaattttggggctccctcgggcacctcgggcagcgctgcagccaccgcggcc
cccgcgggtgggtttggaggatttggtacaacatctacaactgcaggttctgcgttcagc
ttttctgccccaactaacacaggcactactggactctttggtggtactcagaacaaaggt
tttggatttggtactggttttggcacaacaacaggaactagtactggtttaggtactggt
ttgggaactggactgggatttggaggatttaacacacagcagcagcaacagcagcaaaat
acattaggtggtctcttcagtcagcctgcccaagctcctacccagtccaaccagctgata
aatactgcaagtgctctttctgctccgacactattgggagatgaaagagatgctattttg
gcaaaatggaatcaactgcaggcattttggggaacaggaaaaggatatttcaataataat
attccaccagtggaattcacacaagaaaatcccttttgccgatttaaggcagtaggttat
agttgtatgcccaataataaagatgaagatgggctagtggttttagttttcaacaaaaag
gaaacagatattcgaagccaacaacagcagttggtagaatcactgcacaaaattttggga
ggaaaccagaccttaactgtaaatgtagagggtattaaaacattgccagatgatcagaca
gaagttgtcatttatgttgttgaacgttctccaaatggtacatcaagaagagttccagct
acaacattatatgcacattttgaacaagctaatataaaaacacaattgcagcaacttggt
gtaacactttctatgactagaacagaactatctcctgcacagattaaacagcttttacag
aatcctcctgctggtgttgatcctattatttgggaacaagccaaggtggataaccctgat
tctgaaaagttaattcctgtaccaatggtgggtttcaaagagctgcttcgaagattgaag
gttcaagatcagatgactaagcagcatcagaccagattagatattatatctgaagatatt
agtgagctacaaaagaatcaaactacaactatggccaaaattgcacaatacaagaggaaa
ctcatggatctttcccatagaaccttacaggtcctaatcaaacaggaaattcaaaggaaa
agtggttatgccatccaagctgatgaagagcaactgcgggttcagctagatacaattcag
tgtgaactgaatgcacctactcagttcaaaggccgactaaatgaactgatgtcccaaatc
agaatgcaaaatcattttggagcagtcaaatctgaagaaagatattatatagatgcagac
ctattgcgagaaattaagcagcatttgaaacaacaacaggaaggccttagtcacttgatt
agcatcataaaagatgatctagaagatattaaattggtagaacatggattgaatgaagcc
atccatgtcagaggtggtgtctttagttga
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integrated database retrieval system
