Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101962997
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Entry
101962997 CDS
T10664
Symbol
Nup88
Name
(RefSeq) nuclear pore complex protein Nup88 isoform X1
KO
K14318
nuclear pore complex protein Nup88
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03013
Nucleocytoplasmic transport
iti05014
Amyotrophic lateral sclerosis
Brite
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101962997 (Nup88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
DUF7344
FliJ
Motif
Other DBs
NCBI-GeneID:
101962997
NCBI-ProteinID:
XP_005337399
UniProt:
I3M1Y0
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MATAEGPVGDGDLWQTWLPNHVVFLRLREGLKNQSPTDSEKPASSSLPSSPPLPPQLLTR
NLIFGLGGELFLWDGEGSSFLVVRLRGLVGGSEEPSLSQYQRLLCINPPLFEIYQVLLSP
TQHHVALIGIKGLMVLELPKRWGKNSEFEGGKATVNCSTTPIAERFFTSSTSLTLKHAAW
YPSEMLDPHIVLLTSDNLIRIYSLREPQTPIKVIVLSEAEEESLILNKGRAYTASLGETA
VAFDFGPLTAVPKNIFGQKGKDEVVAYPLYILYENGETFLTYISLLHGPGNIGKLLGPLP
MHPAAEDNYGYDACAILCLPCVPNILVIATESGMLYHCVVLEGEEEDDQTSEKSWDSKAD
FIPSLYVFECVELELALKLASGEDDPFDSDFSCPIKLHKDPKCPSRYHCTHEAGVHSVGL
TWIHKLHKFLGSDEEDKDSLQELATEQKCFVEHILCTKPLPCRQPAPIRGFWIVPDILGP
TMICITSTYECLTRPLLSTVHPASPPLLCTREDVEVTESPLRILAETPDSFEKHIRSILQ
RSVANPAFLKSSEKDLAPPPEECLQLISRATQVFREQYILKQDLAKEEIQRRVKLLCDQK
KKQLEDLNYCREERKSLREMAERLADKYEEAKEKQEDIMNRMKKVLHSFHTQLPVLSDSE
RDMKKELQLIPDQLRHLGNAIKQVTMKKDYQQRKMEKVPSPQKPSITLSAYQRKCIQSIL
KEEGEHIREMVKQINDIRNHVNF
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgccgagggtccggtaggcgacggtgatctgtggcagacctggcttcctaat
cacgttgtgttcttgcggctccgggagggactgaaaaaccagagcccaacagactctgag
aaaccggcttcttcatcattgccctcatcgccgcctttgccgccgcagttgctgacgaga
aacctgattttcggcctcggcggagagctctttctgtgggacggagaaggcagttccttc
ttagtggttcgcctccgaggcctcgtcggtggtagtgaggagccttcgctctcccagtac
cagagattactttgcataaatccacctctgtttgaaatttatcaagtcttgttaagtcca
acccaacatcatgtagcactcatcggaataaaaggacttatggtattagaattgcctaaa
agatgggggaagaattctgaatttgaaggtggaaaagcaacagtgaattgtagcaccact
ccaattgctgagagatttttcaccagttctacctctctgactctaaagcatgctgcctgg
tatccaagtgaaatgctagatcctcacatagtgctgttaacatcagacaatttaataaga
atttattctctccgtgagccacagacacctattaaggtgattgtactttcagaagcagaa
gaggaaagtctaatactcaataaaggaagggcatataccgcatctctaggtgaaaccgca
gttgcatttgactttgggccattgacagcagttccaaagaatatatttggacaaaaaggc
aaagatgaagtagtggcatacccactgtacatcttatatgagaatggggagactttcctt
acatatatcagtctgttacatggccctgggaatattggaaaactgttgggtccattgccc
atgcatcctgctgctgaagataactatggttatgatgcttgtgctatactctgcttaccc
tgtgttcccaacatcttagtgattgctactgaatcaggaatgctgtatcactgtgttgtg
ctagagggggaagaggaagatgaccaaacatcagaaaagtcctgggattccaaggctgac
ttcattccttctctgtatgtgtttgaatgtgttgaactagaactcgccctgaaattggca
tctggagaggatgatccctttgattctgacttttcatgtccaattaaacttcacaaagat
cccaagtgtccgtcaagatatcactgtactcatgaagctggtgtacatagtgttgggtta
acctggattcataaacttcataagtttcttggatcagatgaagaagataaggatagttta
caagaacttgctacagaacagaaatgctttgtagaacatatcctttgtacaaagccactg
ccatgcaggcagccagctccaattcgaggattctggattgtccctgatattcttgggccc
acaatgatctgcatcaccagtacctacgagtgcctcacaaggcctttattgagtactgtc
catccagcttctcctccccttctgtgtacccgagaagatgttgaagtgacagagtcccct
ctccgtattctggctgagaccccagattcctttgaaaagcatattagaagcattttgcaa
cgtagtgttgccaatccagcatttctcaaatcatctgaaaaggatttggcccctcctcct
gaggaatgccttcagctcatcagcagagccacccaggtgttcagagaacagtacattctt
aagcaggacctggcaaaggaagagattcagcggagggtcaaattattatgtgaccaaaaa
aagaaacagctagaagatctcaattattgtcgagaggagaggaagagtctacgggaaatg
gctgagcgcttagctgacaaatatgaggaagccaaggagaaacaagaagatatcatgaac
aggatgaaaaaagttcttcacagttttcacactcagctcccagttctctctgatagtgag
agagacatgaagaaagaattacagctgataccagatcaacttcgacatttgggcaatgcc
atcaaacaggttactatgaaaaaagactatcaacagcgaaagatggaaaaggtgccaagt
cctcaaaaaccgagcatcaccctcagtgcctaccagcggaaatgcatccagtccattctg
aaggaggagggtgaacacataagggaaatggtgaagcaaatcaatgatatccgaaatcat
gtaaacttctga
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integrated database retrieval system
