Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963057
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Entry
101963057 CDS
T10664
Symbol
Bhlhe40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
101963057 (Bhlhe40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iti03000
]
101963057 (Bhlhe40)
Transcription factors [BR:
iti03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
101963057 (Bhlhe40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
Motif
Other DBs
NCBI-GeneID:
101963057
NCBI-ProteinID:
XP_005331021
UniProt:
I3LXC6
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MERIPSAQPPPACLPKAPGLEHGDLPGMDFAHIYQVYKSRRGVKRSEDSKETYKLPHRLI
EKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIDQQQQKIIA
LQSGLQAGELGRNVEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLHRVASE
LLQGGTSRKPSDPAPKGMDFKEKASSLAKGLEGPGKNCVPVIQRTFAPSSGEQSGSDTDT
DSGYGGESEKGDLRNEQPYFKSDHGRRFTVGDRVGTIKQESEEPPTKKSRMQVSDDEGHF
TSSDLISNPFLGPHPHQPPFCLPFYLIPPSATAYLPMLEKCWYPTSVPVLYPGLNASTAA
LTSFMNPDKISTPLLMPQRLPSPLSAHPSLDSSALLQALKQIPPLNLETKD
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatccccagcgcgcaaccaccccctgcctgtctgcccaaagcaccaggactg
gagcacggagacctaccaggaatggattttgcccatatctaccaagtgtacaagtcgagg
cggggagtaaagcggagcgaggacagcaaggagacctacaaactgccgcaccggctcatc
gagaaaaagagacgtgaccggattaacgagtgcatcgcccagctgaaggatctcctaccc
gaacatctcaaacttacaactttgggtcacttggaaaaagcagtagttctggaacttacc
ttgaagcatgtgaaagcactaacaaacctgattgatcagcagcagcagaaaattattgct
ctgcagagtggtttacaagcaggtgagctggggagaaacgtggaagcaggtcaagagatg
ttctgctcaggtttccagacgtgtgcccgggaagtgcttcagtacctagccaagcatgag
aacactcgggacctgaagtcttcgcagcttgtcactcacctccaccgtgtggcctctgag
ctgctgcagggtggcacttcccggaaaccatcagacccagctcccaaagggatggacttc
aaggagaaagccagctctctggctaaaggcttggaaggccctggcaaaaactgtgtacca
gtcatccagcggacatttgctccctcaagtggggagcagagcggcagcgatacagacaca
gacagtggctacgggggagaatctgagaagggcgatttgcgcaatgagcagccgtacttc
aaaagtgaccatggacgcaggttcaccgtgggagaccgggtcggcaccattaagcaagaa
tccgaagaaccccctacgaagaagagccgaatgcaggtgtcagatgacgaaggccacttc
actagcagtgacctgatcagcaacccgttcctgggcccacacccgcaccagcctcccttt
tgcctgcctttctatctgatcccaccatcagcaactgcctacctgcccatgctggagaag
tgctggtacccaacctcagtgccggtgttgtacccgggcctcaacgcctccaccgccgcg
ctcaccagcttcatgaacccagacaagatctccactcccttgcttatgccacagagactc
ccttctcccttgtccgcccatccgtccctcgactcttccgccttgctccaggccctgaag
cagatcccgcctttaaacttagaaaccaaagactaa
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