Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963078
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Entry
101963078 CDS
T10664
Symbol
Ubp1
Name
(RefSeq) upstream-binding protein 1 isoform X1
KO
K09275
transcription factor CP2 and related proteins
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iti03000
]
101963078 (Ubp1)
Transcription factors [BR:
iti03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Grainyhead
101963078 (Ubp1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CP2
SAM_3
SAM_1
SAM_PNT
SAM_2
PRIMA1
Motif
Other DBs
NCBI-GeneID:
101963078
NCBI-ProteinID:
XP_005317387
UniProt:
I3MIJ0
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDPSLPLDGETK
HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEISGKLVKSIIRVV
FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT
SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA
DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLPADY
GDSLAKRGSCSPWPDTPTTYANNSPSPAPTFTSSQQSTCSVPDSNSSSPNHQGDGVSQAS
GEQIQPSATTQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNS
LKSRSVRPRLTIYVCQEQPSSATLQAQQQAAGSGGENGSGTPYVYHAIYLEEMVASEVAR
KLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAENNDGIHIILK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcctgggtgctcaagatggacgaggtgatcgagtctgggctggtgcacgacttcgac
gccagcctctcgggcatcgggcaggagctgggcgccggcgcctacagcatgagtgatgtg
ttggcattgcccattttcaagcaggaagatcctagccttccattggatggtgaaacgaaa
catccaccctttcaatatgtgatgtgtgctgccacatcaccggcagtaaaactacatgat
gaaacactcacttacttgaaccaaggtcagtcttacgaaattcggatgttggataatcgg
aaaatgggagatatgcctgagatcagtggaaagttggtaaagagcatcataagggttgta
ttccatgacagacggctacaatatacagaacatcagcaacttgaaggttggaagtggaat
cgcccaggagacagacttcttgatttagatattccaatgtctgtgggcataatcgacaca
aggacaaatccaagtcagttaaatgcagttgagtttctgtgggaccctgcaaaacgcaca
tctgcttttattcaggtacactgcatcagcacagaatttactcctcggaaacatggaggt
gaaaagggagtacctttcaggatccaggttgacacctttaagcaaaatgaaaatggagaa
tacacagatcatcttcactctgctagttgccaaattaaagtttttaagcctaaaggtgca
gacaggaaacaaaaaactgaccgagaaaagatggaaaaaagaacagctcatgaaaaagaa
aagtatcagccgtcctatgataccacaatcctcacagagatgaggcttgagcctataatt
gaagatgcagttgaacatgagcagaaaaagtccagcaagcggactttgccagcagactac
ggtgattctctggcaaagcgaggcagttgttctccgtggcctgatacccccacaacctat
gcgaataacagcccttcaccagcgcccactttcacctcttcccagcagagtacttgcagt
gtcccagacagcaattcttcttccccaaatcatcagggagatggagtttcacaggcatct
ggtgaacaaattcagccttcagctacaacccaggaaacacaacagtggctgctcaaaaac
agattttcttcctatacaagactgttttctaatttttcaggtgccgacttattaaaactg
acaaaggaagatttagttcaaatttgtggtgcagccgatggaattcggctctataattca
ctgaagtcaaggtcggttaggccccgcttaaccatctatgtctgccaggagcagccgagt
agtgccaccctgcaagcgcagcagcaagctgcaggcagtggaggcgagaatggcagtggg
acgccttacgtttaccatgcaatctacttggaagaaatggttgcctcagaagttgcgcga
aaacttgcgttggtgtttaatattcctctccaccaaattaaccaggtttacagacagggt
cccactggcatccacattcttgttagtgatcagatggttcaaaactttcaagatgagagt
tgttttttattctctacagtaaaagctgaaaataatgatggtatccacataattttgaag
tga
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