Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963110
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Entry
101963110 CDS
T10664
Symbol
Tsc1
Name
(RefSeq) hamartin isoform X1
KO
K07206
tuberous sclerosis 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04072
Phospholipase D signaling pathway
iti04140
Autophagy - animal
iti04150
mTOR signaling pathway
iti04151
PI3K-Akt signaling pathway
iti04152
AMPK signaling pathway
iti04211
Longevity regulating pathway
iti04218
Cellular senescence
iti04714
Thermogenesis
iti04910
Insulin signaling pathway
iti05163
Human cytomegalovirus infection
iti05165
Human papillomavirus infection
iti05168
Herpes simplex virus 1 infection
iti05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04072 Phospholipase D signaling pathway
101963110 (Tsc1)
04151 PI3K-Akt signaling pathway
101963110 (Tsc1)
04152 AMPK signaling pathway
101963110 (Tsc1)
04150 mTOR signaling pathway
101963110 (Tsc1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101963110 (Tsc1)
09143 Cell growth and death
04218 Cellular senescence
101963110 (Tsc1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
101963110 (Tsc1)
09149 Aging
04211 Longevity regulating pathway
101963110 (Tsc1)
09159 Environmental adaptation
04714 Thermogenesis
101963110 (Tsc1)
09160 Human Diseases
09161 Cancer: overview
05231 Choline metabolism in cancer
101963110 (Tsc1)
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101963110 (Tsc1)
05163 Human cytomegalovirus infection
101963110 (Tsc1)
05165 Human papillomavirus infection
101963110 (Tsc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hamartin
Motif
Other DBs
NCBI-GeneID:
101963110
NCBI-ProteinID:
XP_013212157
UniProt:
I3M2E6
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MAQPANVGELLSMLDSPTLGVRDDVTAVFKENLNSDRGPMLVNTLVDYYLETSSQPALHI
LTTLQEPHDKHLLDKINEYVGKAATRLSILSLLGHVVRLQPSWKHKLSQAPLLPSLLKCL
KMDTDVVVLTTGVLVLITMLPMIPQSGKQHLLDFFDIFGRLSSWCLKKPGHVTEIYLVHL
HASVYALFHRLYGMYPCNFVSFLRSHYSMKENLETFEEVVKPMMEHVRIHPELVTGSKDH
ELDPRRWKKLETHDVVIECAKISLDPTEASYEDGYAVSHQLSAHFPHRSADVTTSPYVDT
QNSYGSATSTPFSSSRLTLLSTPGQLPQTLSSPSTRLLPEPPQATLWSPSMICGMTTPPT
SPGNVPPDLSHPYSKVFGTTGGKGTPLGTPATSPPPALPCHSDDYVHISPPQATAIQPRK
EEKTDSSRPCLHRQHHLPNDRGLEELPGNKGSVTLSDLPGFLGDLASEEDSIEKDKEEAA
ISEELSEIATVEPEPMVPRGGFDSPFYRDSLPGSQRKTHSAASGTQGSGLNPEPLHSSLD
KLGPDTPKQAFTPIDLPRSGANTSPAGDRERQTSLETSILTPSPCKIPPRRGVGFGSGQP
PPYDHLFEVALPKTACHFVSKKTEELLKKAKGNPEEDYVPSTSPMEVLDRLIQQGADAHG
KELSKSSLPSKSIDWTHFGGSPPSDEIRTLRDQLLLLHNQLLYERFKRQQHALRNRRLLR
KVIRAAALEEHNAAMKDQLKLQEKDIQIWKMSLQKEQDRYSQLQEQRDTVVTQLHSQIRQ
LQHDREEFYNQSQELQTKLEDCRNMIAELRVQLKKANNKVCHTELLLSQVSQKLSNSESV
QQQMEFLNRQLLVLGEVNELYLEQLQNKHSDTTKEVEMMKTAYRKELEKNRSHVLQQNQR
LDTSQKRILELESHLAKKDHLLLEQKKYLEDVKAQARRQLEAAESRYEAQKKITRVFELE
ILDLYGRLEKDGLLKKLEEEKAEAAEAAEERLDCCNDGCPDSVVGHNEEASGHNGETKTP
RPGSTRGSSGGRGAGGSSSSSSELSTPEKPPSQRAGPFSSRWETAMGEPSTSIPTTVGSL
PSSKSFLGMKARELFRNKSESQCDEDGMTISSLCETLKTELGKDLGLEAMTPLNLDSPHP
SPPNPDSVGQLRIMDYNETHHEHS
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggcccagccagcaaacgttggggagctgctttccatgctggattcccctaccctgggc
gtacgtgatgatgtgacagctgtctttaaagagaacctcaattctgaccgtggtcccatg
cttgtaaacaccttggtggactattacctggaaaccagttctcagccagcattgcacatc
ctgactaccttgcaagagccacatgataagcacctcttggacaaaattaatgagtacgta
ggcaaagctgccacccgtttatccatcctgtcgttgctggggcatgttgtgcgactacag
ccgtcttggaagcataaactttctcaagcacctcttttgccttctttactgaaatgtctc
aagatggacactgatgtcgtcgtcctcacaacaggcgtcttggtgttgatcaccatgctg
ccaatgattccacaatcagggaagcagcaccttcttgatttctttgacatttttggccgt
ctttcgtcatggtgcctgaagaaaccaggccacgtgacagaaatctaccttgtccatctc
catgccagtgtttatgccctttttcatcgcctttatggaatgtacccttgcaactttgtc
tcctttctgcgttcacactacagtatgaaggaaaacttggagacttttgaagaagtggtc
aagccaatgatggagcatgtgcgaattcacccagaattagtgactggatccaaggaccat
gaactggaccctcgaaggtggaagaaattagaaactcacgatgttgtgatagagtgtgcc
aaaatctctctcgaccctacggaagcctcatatgaagatggctatgctgtgtctcaccag
ctctctgctcacttccctcatcgctctgctgatgtcactaccagcccttatgttgacaca
cagaatagctatgggagtgctacttctaccccgttctcctcttctcggctgacgttgctc
agtacgcccgggcagctacctcagactctgagttccccgtcgacacggctgttacctgag
ccaccccaagctactctttggagcccatctatgatttgtggtatgaccactcctccgacg
tctcctggaaatgtcccacctgatttgtcacacccttacagtaaagtctttggtacaact
ggtggaaaaggaactcctctgggaaccccagcaacctctcctcctccagccctaccctgc
cattcagatgactatgtgcacatttcacccccccaggccacagctatacaacccaggaag
gaggagaaaacagattcttcaaggccgtgtctgcacagacagcaccatcttccaaatgac
agaggattagaagaactacctggcaacaaaggttctgttactctaagtgatcttccaggg
tttttaggtgatctggcctctgaggaagacagtattgaaaaagacaaggaagaagctgca
atatctgaagagctttctgagatcgctaccgtggaacccgagcccatggttcctcgaggg
ggctttgactctcctttctaccgagacagtctaccaggttctcagcggaagacacattca
gcagcctctgggactcagggatctggcttgaaccctgagcctttacactcctctctggac
aagcttgggcccgacacaccaaagcaagcctttactcccatagacctgccccgaagtggt
gccaacaccagccccgctggggacagggagcgccagacttctctggagaccagtatcctc
actcccagcccttgcaaaattcctcctaggaggggagtgggctttggaagtgggcagcct
cccccatatgatcatctctttgaggtggccttgccaaagactgcctgtcattttgtcagc
aaaaagaccgaggagctgttaaagaaagcaaaaggaaaccctgaagaagactatgtgccc
tctacctccccaatggaagtactggataggttgatacagcagggagcagatgcacacggc
aaggagctcagcaagtcgtccttacccagcaagtctatcgattggacccactttggaggt
tcccctccttcagatgagatccgcaccctccgagaccagttgctattactgcacaaccag
ttactctacgagcgctttaagaggcagcagcatgctctccgcaacaggaggctgctgcgc
aaggtgatcagggctgccgctctggaggaacacaatgctgccatgaaagatcagttgaag
ttacaagagaaagacatccagatatggaagatgagtctgcagaaagaacaagacagatac
agtcagcttcaggaacagcgtgacaccgtggtaacccagctccacagtcagatcagacag
ctgcaacatgaccgagaagaattttacaaccaaagccaggagttgcagacgaagctcgag
gactgcaggaacatgattgcagaactgcgcgtgcagctgaagaaggccaacaacaaggtg
tgccacactgagctgctgctcagccaggtctcccagaagctgtcaaatagcgagtcggtc
cagcagcagatggagttcttgaacaggcagctgttggtgctcggggaggtcaacgaactg
tacttggaacaactgcagaacaagcactcagacaccaccaaggaagtggaaatgatgaaa
actgcctatcggaaggaactagaaaaaaacagaagccacgttctccagcagaatcagaga
cttgatacctcccagaaacggattttggaactggaatctcatttggccaagaaagaccac
cttcttctggaacagaagaaatacttggaggatgtcaaggcccaggcaagaagacagcta
gaggctgcagagagcagatatgaggctcaaaaaaagatcacccgagtgtttgagttggag
atcttagacttgtatggcaggttggaaaaggatggtctcctgaaaaaacttgaagaggaa
aaggcagaagcagctgaagcagcggaagaaaggcttgactgttgtaatgatggctgcccg
gattccgtggtagggcacaatgaagaggcatctggccacaatggagagaccaagactccc
aggcctggcagtacccggggcagtagtggaggtagaggagcaggaggcagcagcagcagt
agcagtgagctttctaccccggagaaacctccaagccagagggcaggcccattcagcagc
cggtgggaaactgccatgggtgagccctccaccagcatccccacgactgttggctctctc
cccagttccaaaagtttcctgggcatgaaggcccgggagttatttcgtaataagagtgag
agccagtgtgatgaggacggcatgaccatcagtagcctttgtgagaccctaaagacagaa
ctggggaaagacttgggcttggaagccatgactcccttgaacctagacagcccacatcca
tctcccccaaacccagacagtgttggacagcttcgcatcatggactacaatgagactcat
cacgaacacagctaa
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integrated database retrieval system
