Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963127
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Entry
101963127 CDS
T10664
Name
(RefSeq) short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
iti04040
]
101963127
Ion channels [BR:
iti04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101963127
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
YVC1_C
Motif
Other DBs
NCBI-GeneID:
101963127
NCBI-ProteinID:
XP_021580720
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All DBs
Position
Unknown
AA seq
886 aa
AA seq
DB search
MLQPNWTEIVNRKLKFPPPLLGAIQEGRLGLVQQLLESGVEATGSGPGGPLRNVEEAEDR
SWREALNLAIRLGHEAITDVLLANVKFDFRQIHEALLVAVDTNQPAVVRRLLARLEREKG
RKVDTKSFSLAFFDSSIDGSRFAPGVTPLTLACQKDLYEIAQLLMDQGHTIARPHPVSCA
CLECSNARRYDLLKFSLSRINTYRGIASRAHLSLASEDAMLAAFQLSRELRRLARKEPEF
KPEYIALESLSQDYGFELLGMCRNQSEVTAVLNDMGEDSETEPEAEGLSQAFEEGIPNLA
RLRLAVNYNQKRFVAHPICQQVLSSIWCGNLAGWRGSTTIWKLFVAFLIFLTMPFLCLGY
WLAPKSRLGRLLKIPVLKFLLHSASYLWFLIFLLGESLAMETQLSTFRGRSQSVWETSLH
MIWVTGFLWFECKEVWIEGLRSYLLDWWNFLDVVILSLYLAAFALRLLLAGLAHMHCRDA
ANEAACHYFTTAERSEWRTEDPQFLAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGR
MIDDMIRFMFILMIILTAFLCGLNNIYVPYQETERLGNFNETFQFLFWTMFGMEEHSVVD
MPQFLVPEFVGRALYGIFTIVMVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSY
FREGLTLPVPFNILPSPKAFFYLLRRIFQFICCCCSCCKTKKPDYPPIPTYANQGAGAGP
GPGEGERGSYRLRVIKALVQRYIETARREFEETRRKDLGNRLTELTKTVSRLQSEVAGVR
RNLAAGGMPRPPDGASILSRYITRVRNSFQNLGPPISETPELTMSGIVGTQDSSETGLQT
AEEAGAPASGESGLSSPAHVLVHREQEEEGAGDLDPQEALGTNRDS
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgctacagcctaactggactgagattgtgaacagaaagctcaagtttccgcctccactc
ttgggtgccatccaagaggggcgactgggtcttgtgcagcagctgctggagtcaggggtc
gaagccacaggcagtgggccaggtgggcccctgaggaatgtggaggaggctgaggatcgc
tcctggagggaagctctcaacctggccatccgcctgggtcatgaggccattaccgatgtg
ttactggccaatgtcaagtttgatttccgacagatccatgaagccctactagtagcagtg
gacacaaaccagccagcagtggtgcgtcgcctgctggcccggctggaaagggagaagggt
cgcaaagtagatactaagtctttctcgctggctttctttgattcatcgatcgatggctcc
cgctttgcacctggtgtcaccccactcaccctggcctgccagaaggacctatatgagatt
gcgcagttgcttatggaccagggtcacaccattgcccggccccaccccgtctcctgcgct
tgccttgagtgcagtaatgcccgcaggtatgacctgctgaagttctctctgtcccgcatc
aacacctaccgaggcattgcgagcagggcccacctctcactggcgagtgaggatgccatg
ctggctgccttccagctcagccgcgagctcaggcgccttgcacgcaaggagcctgagttt
aagcctgagtacattgccctggagtctttgagccaggactatggttttgagctgctgggt
atgtgccggaaccagagcgaggtcactgcagtgctcaacgacatgggagaagacagcgag
actgagcctgaggctgaaggattgagccaggccttcgaggagggcatccccaacctggca
agactgcggctggctgtcaactacaaccagaagcggtttgtagcacaccccatctgccag
caagtcctgtcctccatctggtgtgggaacctggctggttggcgtggaagcaccaccatc
tggaagctctttgtcgccttcctcatcttcctcaccatgcccttcctctgccttggctac
tggctggcacccaagtctcggctgggccgcctgctgaagatcccagtgctgaagttcctg
ttacactccgcctcctatctatggttcctcatcttcctgctgggagaatccctggccatg
gagacacagctgagcactttccgtggccgaagccagagtgtctgggagacttcactacac
atgatttgggtcacaggcttcctgtggttcgagtgtaaggaagtatggatcgagggcctg
cgcagttacctcctggactggtggaacttcctggatgtggtcatcctgtccctgtacctg
gcagccttcgctctgcgcctcctcctggctgggcttgcccacatgcactgcagggatgct
gccaatgaagctgcctgccactatttcaccactgctgagcgaagtgagtggcgcacagag
gatccccagttcttggctgaggtgctttttgctgtcaccagcatgctcagcttcacccgc
ctggcctacattctgccggcccacgagtctttgggcactctgcagatttccattggcagg
atgattgatgacatgatacggttcatgttcatcctcatgatcatcctgactgccttcctc
tgtggcctaaacaacatctatgtgccctaccaggagacagagcggctgggcaatttcaac
gagactttccagtttctgttctggaccatgtttggcatggaggagcacagtgtggtggac
atgcctcagtttctggtgcctgaatttgtaggccgggccctctatggcatttttaccatc
gtcatggtcattgtgctgctcaacatgctcattgccatgatcaccaactccttccagaag
atcgaggatgatgctgacgtggagtggaagtttgctcgctctaagctctacctatcctat
ttccgagagggcctgactctgcctgtgcccttcaacatcctgccctcccccaaggccttc
ttctaccttctcaggagaattttccagtttatttgctgttgctgctcctgctgcaaaacc
aagaagccagactatcccccaatccccacctatgccaaccagggggcaggggcagggcct
gggcctggggagggagagcgtgggtcctaccgccttcgtgtcatcaaggctctggtacag
cgctacatagagactgcccggcgcgagtttgaggagacacgtcggaaagacctgggcaac
agactgacagagttaaccaaaactgtgtctcgactacaaagcgaggttgctggtgttcgt
cgaaacttggcagcaggagggatgccccggcctcctgatggtgccagtatcctcagtcgc
tatatcacccgagtgcgcaacagctttcaaaacctggggccccccatctctgagacccca
gagctgaccatgtcaggaattgtggggacccaagactcttcggaaactgggcttcagact
gctgaagaggctggggctccagcttctggagagtctggcctctcctccccagctcatgtg
ctggtgcacagggagcaagaagaagaaggggctggggacttggacccacaagaggctttg
gggaccaatagggattcctaa
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