Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963153
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Entry
101963153 CDS
T10664
Symbol
Cgn
Name
(RefSeq) cingulin isoform X2
KO
K06102
cingulin
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101963153 (Cgn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_tail_1
Nuf2_DHR10-like
DUF1664
ADIP
Motif
Other DBs
NCBI-GeneID:
101963153
NCBI-ProteinID:
XP_005331278
LinkDB
All DBs
Position
Unknown
AA seq
1195 aa
AA seq
DB search
MAEPRGPVDHGVQIRFITEPEGGAEMDTIRRGVRRPTKDARANTYGVAVRVQGIAGQPFV
VLNSGEKGSDSFGVQIKGSDNQGAPGTLSSDSELPENPYSQVKGFPASSQGSTSDEEPGS
YWNGRLPRSQSQASLAGPIPMDSSNRSNSLLELAPKETSPDSTIDTAPLSSVDSLINKFD
SQVGGQTRGRTGRRTRTLPHEQRKRSQSLDSRLPQDPLEEQERQSPDHWTPSAKYDNHVG
SLKQPSQSPSPVRGLSHPHPAQDWVIQSFEEPQERARDPTMLQFKSTPDLLRDQQETAPP
GSVDHVKATIYGILKEGSSESEASVRRKVSLVLEQMEPLVMASPDSTKTIAGQSEVTRKV
EELQKKLEEEVKKRQKLEPSRVRLERQLEEKAEECDRLQDLLERKKGDAQQSTKELQNMK
LLLDQGDRLRHGLETQVMELQNKLKQGQGSEPAKEVLLKELLETRELLEEVLEGKQRVEE
QLRLRERELTALKGALKEEVASRDQEMEQVRQQYQRDTEQLRRSMQDATQDHAVLEAERQ
KMSALVRGLQRELEETSEETEHWQTMFQKNKEELRATKQELLQLRMEKEEMEEELGEKVE
VLQREVEHARASTRDNLQLEELKKELRWAQDELKELRAQRQNQEAAGRHRDQELEKQLAV
LRVEADRVRELEQQNAQLQKTLQQLKQDCEEASKAKVAAEAETAVLGQRRAAVETTLRET
QEENDEFRRRILGLEQQLKEAHGLAEGGEAVEARLRDRVQRLEAEKLRLQEALNEAQEEE
GSLVAAKRALEVRLEEAQRGLARLGQEQQALSRALEEEGKQREVLRRSKAELEEQKRLLD
RTVDRLNKELEQIGDDSKQALKQLQAQLEDYKEKARREVADAQRQAKDWASEAEKTSGGL
SRLQDEIQRLRQALQASQAERDTALLDKELLVQRLQGLEQEAENKKRSQDDRTRQLKNLE
EKVSRLEAELDEEKNTVELLSDRVNRGRDQVDQLRAELMQERSARQDLECDKISLERQNK
DLKTRLTNLEGFQKPSASFSQLESQNQMLQERLQAEEREKTVLQSTNRKLERRVKELSIQ
IDDERQHVNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQRELEEQHEVNEQLQAR
IKSLEKEAWRKTSRSAAESTLKHEGLSSDEEFDGVYDPSSIASLLTESNLQTSSC
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcctcggggcccggtagaccatggagtccagatccgctttatcacagagcca
gagggcggtgcagagatggacaccatccgtcgtggagtgcgacgccctactaaggatgcc
agagccaatacctacggggtcgccgtgcgcgtgcagggcattgctgggcagccctttgtg
gtgctgaacagtggagagaaaggaagtgactccttcggggtccagatcaagggatccgac
aaccaaggggccccaggaactctgagctctgattcggaactccccgagaacccctactcg
caggtgaaggggtttcctgcctcctcgcagggcagcacgtctgacgaggagcctgggtcc
tactggaatgggagactaccccgatcccagtcccaggcctccctggcaggccccatccct
atggactccagcaacaggagcaacagcttgctggaactggcgcccaaagagacgtcccca
gacagcaccatcgacacggctcccctgtcgtcagtggactccctcatcaacaaatttgac
agtcaagttgggggccaaacccggggacgcacgggccggcgtactcggacactgccccat
gaacagcgcaagcggagccagagcctggacagccggctcccacaggaccccctggaggaa
caggagcgccagtcccccgaccactggactccgagcgccaagtacgacaatcacgtgggc
agcctgaaacagccatcccagagcccgagccctgtgcggggccttagccatccccatccg
gctcaggactgggtcattcagagctttgaggagccacaggagagagcacgggatcccacc
atgctgcagttcaaatcgactccggaccttctccgcgaccagcaggagacagccccacca
gggagtgtggaccacgtgaaggccaccatctatggcatcctcaaggagggaagctcagag
agtgaagcctctgtgaggaggaaggtcagtttggttctggagcagatggagcctctggtg
atggcttctcctgattcgactaagaccatagcagggcagagtgaagtcacccggaaagtg
gaggagctgcagaagaaactggaggaagaggtgaagaagcgacagaagctggagccgtcc
cgggttcgactggagcggcagctggaggagaaggcggaggagtgtgaccggctgcaggac
ctgctggagaggaagaagggggacgcccagcagagcaccaaggagctccagaacatgaag
ctgctcctggaccagggcgacaggttgcgacacggactggagacccaggtgatggagctg
cagaacaagctgaagcagggtcagggttctgaacctgccaaggaggtgctgctgaaggaa
ttgttagagacccgggagcttctggaagaggtcttagaggggaaacagcgggtggaggag
cagctgaggctgcgggaacgcgagctgacggccctgaagggggccctgaaggaagaggtg
gcctcgcgagaccaggagatggagcaggtccgccagcagtaccagcgagacacggagcag
cttcgcaggagcatgcaagatgccacccaggaccacgccgtgctggaggccgagaggcag
aagatgtcagccctggtacggggtctgcagagggaactggaggagacctcagaggagacc
gaacactggcagaccatgttccagaagaacaaggaggagcttagagccaccaagcaggaa
ctcctgcagctgcggatggagaaggaggagatggaagaggagcttggggagaaggtggag
gtcttgcagagggaagtggagcatgctcgagccagcaccagagataatctccagctcgag
gagctcaagaaggagcttcgctgggcccaggatgagctcaaggagctgcgagcgcagcgg
cagaaccaggaggccgccgggcggcaccgcgaccaggagctggagaagcagctggccgtc
ctgagggtcgaggccgaccgagtccgagagctggaacagcagaacgcccagctgcagaag
accctgcagcaactgaaacaggactgtgaagaggcttccaaggccaaggtggcagcggag
gcggagaccgcggtgctggggcagcgccgggcagccgtggagaccacgctgcgggagacc
caggaggagaacgacgagttccgcaggcgcatcctgggtctggagcagcagctgaaggaa
gcccacggcctggccgagggtggggaggcggtggaggcgcggctcagggacagggtgcag
cggctggaggcagagaaacttcggctccaggaggctctgaatgaagctcaggaggaggag
gggagcttggtggcagccaagcgggctctggaggtccggctggaggaggcccagagaggg
ctggcccgcctggggcaggagcagcaagccctgagccgggccctggaggaggaggggaag
cagcgggaggtactgcggaggagcaaggcagagctggaggagcagaagcgtttgctggac
agaactgtggaccgactcaacaaggagctggaacagattggggatgactctaagcaagcc
ctgaagcagctccaggcccagctggaggactacaaggaaaaggcccgtcgggaagtggca
gatgcccagcgccaggccaaggactgggctagtgaggctgagaagacctccggggggctg
agccggctccaggatgagatccagaggctgcggcaggccctgcaggcctcccaggctgag
cgggatactgcgctactggataaagaacttctggtccagcggctgcagggcctggagcaa
gaggcagagaacaagaaacgctcccaggatgacaggaccaggcaactgaaaaaccttgag
gagaaagtctctcgcctggaagccgagttagacgaggagaagaacaccgtggagctgctg
tcagaccgcgtgaaccgtggccgggaccaggtggatcagctgagggcagagctcatgcag
gagcggtctgctcggcaggacctggagtgcgacaagatctccttggagagacagaacaag
gacctgaagacccgactgaccaacttggaaggcttccagaagcccagcgccagtttctct
cagcttgagtcccaaaatcagatgttgcaggagcggctccaagctgaagagagggagaag
actgttctgcagtccaccaaccggaaactggagaggagagttaaagagttgtctatccaa
attgatgacgagcggcagcatgtcaacgaccagaaagaccagttaagcctgagggtgaag
gctctgaagaggcaggtggatgaagcagaagaagagattgagcgactggatggcctgagg
aagaaagcacagcgtgagctggaggaacagcatgaggtcaatgaacagctccaggcccgg
atcaaatccctggagaaagaggcctggcgcaaaacttcccgttcagcggcagagtcgacc
ctcaaacacgagggactgagctcagatgaggaatttgacggtgtctacgacccctcatcc
attgcatcactgctcacggagagcaacctgcaaaccagctcctgttaa
DBGET
integrated database retrieval system
