Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963160
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Entry
101963160 CDS
T10664
Symbol
Ighmbp2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
Enzymes [BR:
iti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101963160 (Ighmbp2)
5.6.2.5 RNA 5'-3' helicase
101963160 (Ighmbp2)
Ribosome biogenesis [BR:
iti03009
]
Eukaryotic type
Other ribosome biogenesis factors
101963160 (Ighmbp2)
Translation factors [BR:
iti03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101963160 (Ighmbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101963160
NCBI-ProteinID:
XP_021587383
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MASATVERFVTKQLDLLELERNAEVEERRSWQESISLKELQSRGVCLLKLQVSSQRTGLY
GRLLVTLEPRRGGSAGVLPSNSFTSGDIVGLYGAAHEGGQLASGILTRITQKSVTVAFDE
SQDLQLDLDRESSYRLLKLANDVTYKRLKAALVALKKFHSGPASPLIELIFHGSAPSPAG
DIGPLVLFNAALDPSQKEAVLFALSQKELAIIHGPPGTGKTTTLVEIILQAVKQGLKVLC
CAPSNIAVDNLVERLARWKQRILRLGHPARLLESIQQHSLDAVLARSDSTQIVADIRKDI
DRILVKNRKTQDKRERGNFWNEIKLLRKELKQREEAAMVESLTQASVVLATNTGASADGP
LRLLPEGCFDVVVVDECAQALEASCWIPLLKARKCVLAGDHRQLPPTVVSHKAAQAGLSR
SLMERLAEEQGASAVRMLTVQYRMHQAIMRWASEVMYGGQLEAHPSVAGHLLRDLPGVAA
TEETGIPLLLVDTAGCGLLELEDDDEQSRGNPGEVRLVTLHVQALVDAGVQAGDIAVITP
YNLQVDLLRQSLAPRHPELEIRSVDGFQGREKEAVVLSLVRSNRKGEVGFLAEDRRINVA
VTRARRHVAVVCDSRTVHNHAFLKTLVDHFTEHGEVRTAFEYLDDIVPENYSHEGSQSHS
QAAKARGPASARPPGRPPGGRQKGGPQAASRWRRGPKPGGPEACPQPHLNGEDPGAAGGT
GATALFRATIMEFLGGEETQLEFPASLSSHDRLRVHQIAEELGLWHESSGEGRARRVTLR
KAGAGRRAPQPASQTEQPPGQPHSQVQPDLKALSLESPPLEKSGHEQPARKAPPAGKVPP
ARKAPPAGEGPPAGKGPPAGEGPPAGEGPPAGKGPPAGEAPPAGEGPPAGKGPPAVGVGL
PKAPDKRKKKGRAAPAAPAEEDLDALLSAAMKADRTCAFAKCSASVVTLGQLCQLCGHRY
CLSHHLPEVHGCGEKARAHARQRISREGVLYAGSGTKDRSLDPAKRAQLQSKLDRKLGEL
SSQRTSRRKERGT
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggccactgtggagaggttcgtgaccaagcagctggacttgctggaactggag
aggaacgcggaggtggaggagcgcaggtcctggcaggagagcatctctctgaaggagctc
cagagccggggcgtgtgtctgctgaagctgcaagtgtccagccagcgcacggggctgtac
ggacggctgctggtcaccctggagcccaggaggggtggctctgccggggtgcttcccagc
aacagcttcacttctggtgacattgtgggtctgtatggtgctgcccacgaaggtggtcag
ctggcctctgggatcctgacccgtatcacccagaagtctgtcacggtggcctttgacgag
tcccaggacctccagttggacttggatcgagagagttcctacaggctgctgaagctcgcc
aatgacgtcacgtacaagcggctgaaggcggctctggtggctctgaagaagttccactcg
gggccggcgtccccgctcatagagctgatcttccacggatccgcccccagccctgccggt
gacataggccccctggtgctcttcaatgccgccctggacccctcccagaaggaagccgtc
ttgtttgcgctgtcccagaaagagctcgccatcatccacggaccgccgggcactgggaaa
accacgaccttggtcgagatcatcctgcaggctgtgaagcagggcctgaaggttctgtgc
tgtgccccctcgaacatcgcggtggacaatctggtggagcgtctggcccgctggaagcag
cggatcctgcgcctggggcaccctgcccgcctgctggagtccattcagcagcactctctg
gacgcggtgttggcgcggagcgatagcacccagatcgtcgcagacatcaggaaggacatc
gaccggatcctggtaaaaaacagaaagacccaggacaagagagagaggggtaatttttgg
aatgaaatcaagctgctaaggaaggagctgaagcagcgggaagaggccgccatggtggag
agcctcacgcaggccagtgtggtcctggccaccaacacaggagcttctgccgacggcccc
ctgaggctgctgcccgagggctgctttgacgtggtggtcgtggacgagtgtgcccaggcc
ctcgaggccagctgctggatccccctgctgaaggccaggaagtgcgtcctggccggagac
cacaggcagctgccgcccacggtagtctctcacaaggccgcgcaggctgggctgtcccgc
agcctgatggagcgcctggctgaggagcagggggcgagcgcagtgcggatgctgaccgtg
cagtaccgcatgcaccaggccatcatgcgctgggcctccgaggtcatgtacggcgggcag
ctcgaagcccacccctccgtggccggccacctcctgagggacctcccaggcgtggcggcc
acggaggagacgggcatccctctgctgcttgtggacactgccggctgtgggctgctggag
ctggaggacgatgacgagcagtcgagggggaacccaggtgaagtccgcctcgtcaccctc
cacgtgcaggctctggtggatgctggcgtccaggcaggggacattgctgtcatcacgcct
tacaacctccaggtggacctgctcaggcagagcctcgcgcccaggcacccggagctggag
atcaggtctgtggatggcttccagggccgcgagaaggaggcggtggtgctgtccctcgtc
aggtccaataggaaaggtgaagtgggcttcctggccgaagaccggcggatcaacgtggcc
gtcacccgcgcacggcgccacgtggctgtggtctgcgattcccggaccgtccacaaccac
gcctttctgaagaccttggtggaccatttcacagagcacggggaggtgcgcacggccttc
gagtacctcgacgacatcgtccccgaaaactattcccacgagggttcccagagccacagc
caggctgcgaaggcccggggccctgcctcagccaggccacctggacgcccaccaggtggg
cggcagaagggaggcccacaagctgccagccgctggaggcggggcccgaagcctgggggc
cctgaagcctgtccccagccccacctcaacggtgaggacccgggggcagcaggaggcaca
ggggccacggcgctcttcagggccacgatcatggagttcctgggcggcgaggagacgcag
ctggagttccccgcctccctgagctctcacgaccggctgcgcgtccaccagatagccgag
gagctcggcctgtggcacgagagctccggggagggcagggcgcggcgagtcaccctgcgc
aaggcgggggctggccgcagagccccccagcccgcctcccaaacagagcagccccccggg
cagccgcacagccaggttcagccggatctgaaggcgctgtccctggagagtccccccctg
gagaagagtggccacgagcagccagccaggaaggcgccaccagccgggaaggtgccacca
gccaggaaggcgccaccagccggggaggggccaccagccgggaaggggccaccagccggg
gaggggccaccagccggggaggggccaccagccgggaaggggccaccagccggggaggcg
ccaccagccggggaggggccaccagctgggaaggggccaccagccgtgggcgtggggctg
ccgaaggctccagacaagaggaagaagaagggacgtgcggccccagcggctcctgccgag
gaggaccttgacgccctgctgtcggctgccatgaaggccgatagaacctgtgcctttgcc
aagtgctcggccagcgtcgtgaccctcggccagctctgccagctttgtggccaccgctac
tgcctcagccaccacctgcccgaggttcacggctgtggcgagaaggctcgtgcccacgcc
cggcagagaatcagccgcgaaggcgtcctctatgcaggcagcgggaccaaggacaggtcc
ctggatccagccaagagggctcagctgcagagcaagctggacaggaagctgggcgagctc
agcagccagaggacgagcaggaggaaggagaggggcacgtga
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