Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963207
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Entry
101963207 CDS
T10664
Symbol
Shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04014
Ras signaling pathway
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
101963207 (Shoc2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_9
LRR_13
NKWYS
Motif
Other DBs
NCBI-GeneID:
101963207
NCBI-ProteinID:
XP_005320728
UniProt:
I3MSZ4
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSSSLGKEKDSKEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAA
QPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPSSIK
ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIP
RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtagtttaggaaaagaaaaagactctaaagagaaagatcccaaagtaccatca
gccaaggaaagagaaaaggaggcaaaggcctctggaggttttgggaaagaaagcaaagaa
aaagaacctaaaaccaaagggaaagatgccaaagatggaaaaaaggactccagtgctgcc
caaccaggggtggctttttcagttgacaatacgatcaaacggccaaatcctgcacctggg
actaggaaaaaatccagtaacgcagaagtgattaaagagctcaacaaatgccgggaagag
aattcaatgcgtttggacttatccaagagatctatacacattttgccatcatcaatcaaa
gagttgactcaattaacagaactttatttatacagtaacaaactgcagtccctcccagca
gaggtaggctgtttagtaaatctcatgacactggctctaagtgaaaattcacttaccagt
ttgcctgactctcttgataacttgaagaagctgcggatgcttgatttacggcataataaa
ctgagagaaattccttcagtggtgtataggctagattctctcaccactctctaccttcgc
tttaatcgtattactactgtggaaaaggacatcaaaaacctgtcaaaactcagcatgctt
agcattcgcgagaacaaaatcaaacaactacctgctgaaattggtgaattatgtaacctc
attacgctggatgtagctcacaatcaacttgaacatcttccaaaggagattggaaactgc
acacagataaccaaccttgacttgcagcacaatgaactgctagacctcccagatactata
ggaaacctgtccagtttaaatcgtcttggtctgagatacaatagactgtcagcaataccc
agatcactagcaaaatgcagtgcgcttgaagaattaaatttagagaacaataacatttct
actttaccagagagtcttttatccagtcttgtgaaactgaatagcttgaccttagctaga
aattgcttccaattgtatccagtgggtggtccatctcagttttctaccatctattccctc
aacatggaacacaatcgaatcaataaaatcccatttggaattttctctagagcaaaagta
ttaagtaagctgaatatgaaggacaatcagttaacatcacttcctttggactttggaact
tggaccagcatggtagaattgaatttagccactaatcagctcacaaagatccctgaggat
gtatctggacttgtttctcttgaggttctaatattatcaaacaatcttctgaagaagctt
ccccatggtcttggaaaccttaggaagttaagagagttggatctagaggagaacaaatta
gaatctttgccaaatgaaattgcttatcttaaagatttacagaaattagtcttgacaaac
aaccagttgaccactcttcccagaggcattggtcaccttaccaatctcacacatctaggc
cttggagagaacctacttactcatcttcctgaggaaattggtacactggaaaacctagaa
gaactgtatttgaatgacaaccctaaccttcatagccttccctttgagctggctctctgc
agcaaactttcaatcatgagtattgagaactgtccactcagtcaccttccacctcagatt
gttgctgggggaccttctttcatcattcagttcttaaaaatgcagggtccatatcgtgcc
atggtctga
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