Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963235
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Entry
101963235 CDS
T10664
Symbol
Col9a3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04151
PI3K-Akt signaling pathway
iti04510
Focal adhesion
iti04512
ECM-receptor interaction
iti04820
Cytoskeleton in muscle cells
iti04974
Protein digestion and absorption
iti05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101963235 (Col9a3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101963235 (Col9a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101963235 (Col9a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101963235 (Col9a3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101963235 (Col9a3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
101963235 (Col9a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
iti00535
]
101963235 (Col9a3)
Proteoglycans [BR:
iti00535
]
Extracellular matrix (ECM) proteoglycans
Others
101963235 (Col9a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
101963235
NCBI-ProteinID:
XP_021581995
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MEPLPQPIHNCGEDGNQAPPTLDCGERSLSCRLKALAAAYPSQAWPGCCQRCHGAGRTVS
PLFLTTPSQRDAVVKLPAGARLRRVKAGPRGPPGPQGPPGKPGKDGIDGEAGPPGLPGPP
GPKGTPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGLPG
PPGEAGVSGLPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPAICPPG
PPGPPGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPAGIPGTVGLQGPRGLPGLPGPLG
PPGDRGPLGFRGPPGVPGAPGKVGDRGERGPEGFRGPKGDLGRPGPKGIPGMAGPAGEPG
MPGKDGRDGVPGLDGEKGEAGRSGAPGEKGPNGLPGLPGRAGAKGDKGEPGRAGELGEAG
PSGEPGVPGDVGVPGERGEAGHRGSVGALGPQGPPGAPGVRGFQGRKGSMGDPGLPGPQG
LRGDVGDRGPGGATGPKGDQGIAGSDGLPGDKGELGPSGPLGPKGEAGDRGELGPKGIQG
PNGTSGVQGVPGPPGPLGFQGVQGVPGITGKPGVPGKEASEQRIRELCGGMISEQIAQLA
AHLRKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGSQGDR
GDKGAAGAGLDGPAGDQGLQGPQGVPGISKDGRDGAHGEPGLPGDPGLPGAVGAQGTPGI
CDTSACQGAVLGGGGEKSGARSS
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggagccacttccccagcccattcacaactgtggagaggatgggaatcaagcccctcca
actctcgactgcggagaaaggagcctttcttgtcggctgaaagccctggcggccgcctac
ccctcgcaggcctggcccggctgctgccagcgctgccacggggctggaaggacagtgtcg
cctttgttcctgaccactcctagccagagagatgcagtggttaaactgcccgctggcgcc
aggctccgcagggtgaaagcaggtcctcgaggccctcctggcccccaagggccacctgga
aagccgggcaaggatggcatcgatggagaagctggtcctccaggtctgcctgggcccccg
ggaccaaaagggaccccaggcaagccagggaagccaggagaagcaggtctgccgggactg
cctggtgtggacggtctgactgggcgggatggaccccctggacccaaaggtgcccctgga
gaacggggaagtctaggacctccggggccacccgggctggggggcaaaggtctccctgga
ccccccggagaggcgggagtgagcggcctcccaggtggcatcggcctccgtggtcccccg
ggaccctctggactccccggcctgcctggccccccaggacctcctggacctcccggacac
cctggggtcctccccgaaggtgctacagatctgcagtgccctgccatctgcccaccaggt
cccccaggacccccaggaatgccagggttcaaggggcccacgggctacaaaggggagcag
ggagaagtcggcaaggatggtgagaagggtgaccctggcccccctggtcctgccggcatc
ccaggcaccgtggggctgcagggtccccgaggattgccaggacttccagggccacttggg
ccccctggggaccggggtccccttgggttccgaggcccccctggggttccgggagcacct
gggaaagtgggtgacagaggcgagaggggcccagaaggtttccgtggccccaaaggtgac
cttggcagacccggtcccaaagggatccctggaatggcggggccagctggcgagccgggc
atgccaggcaaggatggccgggacggggtgccaggactcgacggcgagaagggggaggct
ggtcgcagcggagccccaggagagaagggtcccaacgggctgccgggcctccctggacgc
gccggcgccaagggcgacaagggagaaccgggtagagctggggagctgggtgaggctggc
ccctctggagagccaggagtccctggagatgttggcgtgcctggggagcgtggtgaggct
ggtcacaggggctcagtgggggctcttggcccacaaggccctccgggagcccctggtgtg
cgaggcttccagggccggaagggcagcatgggagaccccggccttccaggtccccagggt
ctccgaggcgatgtgggtgaccggggcccaggaggtgccacaggccctaagggagaccag
ggcattgcaggttccgatggccttcctggggacaaaggcgagctgggtcccagcggcccc
cttggacctaaaggagaggctggcgatcgaggggagctgggccccaaaggcatccaagga
cccaacggcacgagcggagtccagggcgtccctgggcccccaggtcctctcggcttccag
ggcgtgcagggtgtccccggcatcaccgggaagcctggcgttccggggaaagaagccagt
gagcaacgcatcagagagctgtgtgggggaatgataagcgagcaaatcgcacagttagca
gcgcacctgaggaagcctttagcaccaggctccattgggcgacctggtccagccggcccc
ccagggcccccaggtcctcccggctccatcggccaccctggtgctcgaggaccccctgga
tatcgtggtcccactggggagctgggagaccctggacccagaggaagccagggtgacaga
ggagacaagggtgcagcaggtgcagggctggacgggcctgccggagaccaggggctccaa
gggccacagggtgtgcctggcatcagcaaagacggccgagatggtgctcatggcgagcct
gggcttcctggtgatccaggccttcctggcgcagtcggggctcaggggactccagggatc
tgtgacacctcagcctgtcaaggagccgtgctgggagggggcggagaaaagtcaggtgcc
cggagctcgtga
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integrated database retrieval system
