Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963283
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Entry
101963283 CDS
T10664
Symbol
Siah1
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04115
p53 signaling pathway
iti04120
Ubiquitin mediated proteolysis
iti04137
Mitophagy - animal
iti04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101963283 (Siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
101963283 (Siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
101963283 (Siah1)
09143 Cell growth and death
04115 p53 signaling pathway
101963283 (Siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101963283 (Siah1)
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101963283 (Siah1)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
101963283 (Siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
101963283
NCBI-ProteinID:
XP_005318213
LinkDB
All DBs
Position
Unknown
AA seq
313 aa
AA seq
DB search
MTGKPTLPFLYSWRGVLLTCLPAARTRKRKEMSRQTATALPTGTSKCPPSQRVPALTGTT
ASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEK
VANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLM
HQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIV
QLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAE
NGNLGINVTISMC
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgactggaaagcctaccttaccctttttgtactcctggaggggagtcttgctcacatgt
ttacctgcggctaggacaaggaagagaaaagagatgagccgtcagactgctacagcatta
cctactggtacctcaaagtgtccgccatcccagagggtgcctgccctgactggcacgaca
gcatccaacaatgacttggcgagtctttttgagtgtcctgtctgctttgactatgtgtta
ccacccattcttcaatgtcagagtggccatcttgtttgtagcaactgtcgcccgaagctc
acatgttgtccaacttgccggggcccgttgggatccattcgcaacttggctatggagaaa
gtggccaattcagtacttttcccttgtaaatatgcctcttctggatgtgaaataactctg
ccacatacagaaaaagcagaccacgaagagctctgtgagtttaggccttattcctgccca
tgccctggtgcttcctgtaaatggcaaggctctttggatgctgtaatgccccatctgatg
catcagcacaagtccattacaaccctacagggagaggatatagttttccttgctacagac
attaatcttcctggtgctgttgactgggtgatgatgcagtcctgttttggctttcacttc
atgttagtcttggagaaacaggaaaaatacgatggtcaccagcaattcttcgcaattgta
cagctgataggaacacgcaagcaagctgaaaattttgcttatcgacttgagctaaatggt
cataggcggcgattgacttgggaagcgactcctcgatctattcatgagggaattgcaaca
gccattatgaatagtgactgcctagtctttgacaccagcattgcacagctttttgcagaa
aacggcaatttaggcatcaatgtaactatttccatgtgttga
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