Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963294
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Entry
101963294 CDS
T10664
Symbol
Rpn1
Name
(RefSeq) LOW QUALITY PROTEIN: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00510
N-Glycan biosynthesis
iti00513
Various types of N-glycan biosynthesis
iti01100
Metabolic pathways
iti04141
Protein processing in endoplasmic reticulum
Module
iti_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
101963294 (Rpn1)
00513 Various types of N-glycan biosynthesis
101963294 (Rpn1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101963294 (Rpn1)
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Gene cluster
GFIT
Motif
Pfam:
Ribophorin_I
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
101963294
NCBI-ProteinID:
XP_040147501
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All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MMGEEEEENNLEVRETKIKGRSGRFFLVKLPVALDPGAKMSLVVETVYTHVLQPYPTQIT
QSEKQLVVFEGNHYFYSPYPTKTQTTRVKLASRNVESYTKLGNPTRSEDVLDYGPFQNIP
AYSQDPFKVHYENNNPFLTITSMTRVIEVSHWGNIAVEENVDLKHTGAVLKGPFSRYDYQ
RQPDSGISSIRSFKTILPAAAQDVYYRDEIGNVSTSHLLILDDSVEMEIRPRFPLFGGWK
THYIVGYNLPSYEYLYNLGDQYALKMRFVDHVFDEQVIDSLTVKIILPEGAKXVPVPLSP
ASSRLPLVPKPRAESGAXXMLIKQLXLSDAHATSCGVHYTFNKVLMLQEPLLVVAAFYVL
FFTVIIYVRLDFSITKDPAAEARMKVACITEQVLSLVNKRLGLYRHFDETINRYKQSRDV
STLNSGKKGLETEHKALSSEIALLQSRLKTEGSDLCDRVSEMQKLDAQVKELVLKSAVEA
ERLVAGKLKKDTYIENEKLISGKRQELVTKIDHILDAL
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatgggagaagaggaggaagagaacaatctagaagtccgggaaaccaaaattaagggc
agaagcgggagattcttcctggtcaagctccccgtcgcccttgaccccggggccaagatg
tccctcgtggtggagaccgtgtacacccacgtgcttcagccctacccgacgcagatcacg
cagtcggagaagcagctggtggtgttcgagggcaaccattatttctactccccctacccc
accaagacccagaccacgcgcgtcaagctggcctcgcgcaacgtggagagctacaccaag
ctgggcaaccccacgcgctcggaggacgtgttggactatgggcctttccagaacattcct
gcctacagtcaggatcccttcaaagtccactacgagaacaacaacccgttcctgaccatc
accagcatgacccgggtcatcgaggtctcccactgggggaacatcgccgtggaggagaac
gtggacctcaagcacacgggcgccgtgctcaaggggcccttctcccgctacgactaccag
cggcagcccgacagcggcatatcctccatccgctcctttaagaccatcctgcccgctgcc
gcccaggacgtgtactaccgggatgagatcggcaacgtgtccaccagccacctcctcatc
ctggacgactctgtggagatggagatccggcctcgcttccccctcttcgggggatggaag
acccactacatcgtcggctacaacctcccgagctacgagtacctctataacttgggcgac
cagtacgctctcaagatgaggttcgtggaccacgtgttcgacgagcaggtgatcgactcc
ctcacggtgaagatcatcctcccggagggcgccaagtgagtgcccgtccccctgtcacct
gcctcctcccggctccccctggtgcctaaaccacgggccgagtccggggcatagtagatg
ctcatcaaacagctttgactgagtgacgcgcacgccacgtcctgcggggtgcactacacc
ttcaacaaggtgctgatgctgcaggagcctttgctggtggtggccgccttctacgtcctc
ttcttcaccgtcatcatctacgtgcgcctcgacttctccatcaccaaggacccggctgcg
gaggccaggatgaaggtggcctgcatcacggagcaggtcctgagcctggtgaacaagagg
ctgggcctctaccgccacttcgacgagaccatcaacaggtacaagcagtcgcgcgacgtg
tccacgctcaacagcggcaagaagggcctggagacggagcacaaggccctgagcagcgag
atcgccctgctgcagtcgcgcctcaagaccgagggctccgacctctgcgaccgggtgagc
gagatgcagaagctggacgcgcaggtgaaggagctggtgctcaagtcggccgtggaggcc
gagcgcctggtggccggcaagctcaagaaggacacctacatcgagaatgagaagctcatc
tcagggaagcgacaggagctggtcaccaagatcgaccacatcctggacgccctgtag
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