Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963323
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Entry
101963323 CDS
T10664
Symbol
Fmr1
Name
(RefSeq) synaptic functional regulator FMR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101963323 (Fmr1)
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101963323 (Fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
101963323 (Fmr1)
mRNA cycle factors
Stress granule specific factors
101963323 (Fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXMRP1_C_core
FXMR_C2
KH_9
Tudor_FRX1
KH_1
Agenet
KH-I_KHDC4-BBP
KIF2A-like_1st
Motif
Other DBs
NCBI-GeneID:
101963323
NCBI-ProteinID:
XP_005325195
UniProt:
A0A287CX40
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Position
X:114286773..114324847
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AA seq
611 aa
AA seq
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MEELVVEVRGSNGAFYKAFVKDVHEDSITVSFENNWQPERQIPFHDVRFPPPVGYNKDIN
ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP
ATKDTFHKIKLEVPEDLRQMCAKESAHKDFKKAVGAFSVTYDPENYQLVILSINEVTSKR
AHMLIDMHFRSLRTKLSLILRNEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGAN
IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSFLEFAEDVIQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEAENEKNVPQEEEIMPPNSLPSNNSRVGPNPSEEKKHLDIKE
NSTHFTQPNSTKVQRGMVPFVFVGTKDSIANATVLLDYHLNYLKEVDQLRLERLQIDEQL
RQIGASSRPPPNRTDKEKGYVTEDGQGMGRGSRPYRNRGHGRRGPGYTSGTNSEASNASE
TESDHRDELSDWSLAPTEEERENFLRRGDGRRRGGGGRGQGGRGRGGGFKGNDDHSRTDN
RPRNPREAKGRTADGSLQIRVDCNNERSVHTKTLQNTSSEGNRLRTGKDRNQKKEKPDSV
DGQQPLVNGVP
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggtggtggaggtgcggggctccaatggcgctttctacaaggcatttgta
aaggatgttcatgaggattcaataacagtttcatttgaaaacaactggcagccagagaga
cagattccattccatgatgtgagattcccaccacctgtaggttataataaagatataaat
gaaagtgatgaagttgaggtttattccagagcaaatgaaaaagagccttgctgttggtgg
ttagctaaagtgaggatgataaagggtgagttttatgtgatagaatatgcagcatgtgat
gctacatacaatgaaattgtcacgattgagcgtctacgatcggttaatccaaacaaacct
gctacaaaagatactttccataagatcaaacttgaggtgccagaagacttaagacaaatg
tgtgccaaagaatcggcacataaggactttaaaaaggcagttggtgccttctctgtaact
tatgatccagaaaattatcagcttgtcattttgtccatcaatgaagtcacttcaaagcga
gcacatatgttgattgacatgcactttcgaagtctgcgcactaagttgtctctgatacta
agaaatgaagaagctagtaagcagctggagagttcaaggcagcttgcctcaaggtttcat
gaacagtttattgtacgagaagatctgatgggtctagctattggtactcatggtgctaat
attcagcaagcaagaaaagtacctggggtcactgctattgatctagatgaagatacctgc
acgtttcatatttatggagaggatcaggatgcagtgaaaaaggctagaagctttcttgaa
tttgctgaagatgtcatacaagttccaagaaacttagtaggtaaagtaataggaaaaaat
ggaaaactgattcaggagattgtggacaagtcaggagttgtgagggtgagaattgaggcc
gaaaatgagaaaaatgtcccacaggaagaggaaattatgccaccaaattccctaccttcc
aataattcaagggttggacctaatccctctgaagaaaaaaaacatttagatataaaggaa
aacagcacccattttactcaaccaaacagtacaaaagtccagaggggtatggtaccattt
gtttttgtgggaacaaaggatagcatagctaatgccactgttctcttggattatcacctg
aactacttaaaggaagtagaccagttgcgtttggagagattacaaattgatgagcagttg
cgacagattggagctagttctagaccaccaccaaatcgtacagataaggaaaaaggctat
gtgactgaggatggtcaaggaatgggtcgaggtagtagaccttacagaaatagggggcac
ggcagacgcggtcctggatatacttcaggaactaattctgaagcatcaaatgcttctgaa
acagaatctgaccacagagacgaactcagtgattggtcattagctccaacagaggaagag
agggagaactttctgcgcagaggagacggacggcggcgtggagggggaggaagaggacag
ggaggaagaggacgaggcggaggcttcaaaggaaacgacgatcactcccgaacagataat
cgcccacgtaatccaagagaggcaaaaggaagaacagctgatggatcccttcagatcaga
gttgactgcaataatgaaaggagtgtccacactaaaacattacagaatacctccagcgaa
ggtaatcggctgcgcacgggtaaagatcgaaaccagaagaaggaaaagccagacagcgtg
gatggtcaacaaccactcgtgaatggagtaccctaa
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