Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963379
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Entry
101963379 CDS
T10664
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101963379
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101963379
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101963379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-rbx1
zf-UDP
zf-RING_4
Prok-RING_4
zf-C3HC4_4
RING_XB3-XBAT31
Rtf2
zf-Nse
TRAF3_RING
zf-RING_6
DZR
zf-RING_10
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
101963379
NCBI-ProteinID:
XP_021575651
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MRRTPPEARGTPTRTLFPKSLRAAGFRERCKGLCLVLRLRVAVALAAANPALGLALVFQI
TFAKLQRNPLKVLFPIVICFATNLATLQRSSRVQYLQRKHRGGTASSRQAQKRTREAASI
PEISLEAEPIEFVETAGDEIMDLTCESLEPVVVDLTHNDSIEIVDQRRRPRSNARRLRQD
HANICKVGSDDEELSRDRDVYGTTHTPRNARDEGATGLRPSGTVSCPIGMDGYSEMVQNG
RLIVSTECGHVFCRQCLLDSLKNANTCPTCRTKINHKRCHPIYI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggacgccgcccgaagcccgcgggacccctactcggactctatttcccaaaagt
ctgcgcgccgccggatttagggaacgatgcaaaggtctctgcctcgtcctgcggttaaga
gttgctgttgccctggccgccgcgaaccccgcgctcggcttagcacttgtatttcagata
acctttgccaaattacaaagaaacccactgaaagtcttatttcctatagtcatctgcttt
gccacaaacctcgccactttgcagagaagcagccgagtacaataccttcagagaaagcat
cgtggtggaactgcaagttctagacaagcccagaagcgaactcgggaggcagcctccatc
cctgagatttccttggaagcagaacccatagaattcgtggaaactgctggagatgaaatc
atggacctcacttgtgaatctttagagcctgtggtggtggacctgactcacaatgactcc
attgagattgttgaccaaaggaggaggccaaggagcaacgcaaggaggctacgccaagac
catgccaacatctgcaaggtgggcagtgatgacgaggagttgtccagagacagagatgtg
tatgggaccacccacactcccagaaacgccagggacgagggggccacaggactcaggccc
tctggtaccgtcagttgtcccatcggcatggacggatactcagagatggtgcagaatgga
cgtctcattgtctctacagagtgtggccacgtcttctgtcgccagtgcctccttgattcc
ctaaagaatgctaatacttgcccaacttgtaggacaaagatcaaccacaaacggtgccac
cccatttatatatga
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