Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963396
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Entry
101963396 CDS
T10664
Symbol
Rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
101963396 (Rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101963396 (Rnf43)
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101963396 (Rnf43)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101963396 (Rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
DUF4381
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
101963396
NCBI-ProteinID:
XP_040124968
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MSGGHQLQLAALWPWLLMATLQAGFGRTGLVLATAVESERSAEQKAIIRVIPLKMDPTGK
LNLTLEGVFAGVAEITPAEGKLMQSHPLYLCNASDDDNLEPGFISIVKLESPRRAPRPCL
SLASKARMAGERGASAVLFDITEDRAAAEQLQQPLGLTWPVVLIWGNDAEKLMEFVYKNR
KAHVRIELKEPPAWPDYDVWILLTVVGTIFVVILASVLRIRCRPRHSRPDPLQQRTAWAI
SQLATRRYRASCRRAQAERPDSGSSCSSAPMCAICLEEFSEGQELRVISCLHEFHRSCVD
PWLHQHRTCPLCMFNIVEGDSFSQPLGPSRSYQEPGRRLHLIRQHPGHAHYHLPAAYLLG
PSRNSGTRPPRPRPFLPSQEPRHQRIPRAAHLRAAGEQQRQAVAQHPYAQGWGLSHFRCT
SQHPTSCPAPLRRARPHDSSGSGESYCTERSGYLADGPASDSSSGPCHGSSSDSVVNCTD
ISLQGIHGSSSTFRSSLSSDFDPLVYCSPQGDLQGEEMQSSVTSRPRSLDSVVPTGETQV
SSHVHYHRHRHYHYKKRFQWHGRKSGPETGVPQSRPAVSRTQPQPEPPFPDQQVTKSNPA
ALSGQPSNPQRPRALTEPAPDPPEAASSSPSSPGLLNLQKSSLTVRHPQRKRRGGPSDPT
PTSRPQDLTVHPACQMFPHYSPSLAYLWPPEAHPLVFRPPGLDRRLLPEDPGPCYSSSQP
VWLCLTSRQPLGPHPPGEGPSEWSSDTPESRPCPHPHCQMSPAQPAPEDMGLASQGIQDQ
RRSLRSCVNRLCEMVRPSSNQECASVI
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggccaccagctgcagctggctgccctctggccctggctgctgatggctacc
ctgcaggcaggctttggacgcacaggactggtactggcaacagcggtggagtctgaaaga
tcagcagagcagaaagctattatcagagtaatccccttgaaaatggaccccacaggaaaa
ctgaatctcactttggaaggtgtgtttgctggtgttgctgaaataactccagcagaagga
aaattaatgcagtcccaccccctgtacctgtgcaatgccagtgatgatgacaatttggag
cctggattcatcagtatcgtcaagctggagagtccccgacgggcccctcgcccctgcctg
tcactggccagcaaggcccggatggccggtgagcgaggagccagtgcagttctatttgac
atcacagaggatcgagctgccgctgaacagctgcagcagcccctaggactgacttggcca
gtggtgctcatctggggcaatgatgcagaaaagctcatggagtttgtatataagaaccgg
aaagcccatgtgaggattgagctgaaggagccccctgcatggccagattatgatgtatgg
atcctcctgacagtggtgggcaccatctttgtggtcatcctggcttctgtgctgcgcatc
cggtgccgtccccgccacagcaggccggacccccttcagcagcgaacagcctgggccatc
agccagttggccaccagaaggtaccgggccagctgcaggagggctcaggctgagcggcca
gactcaggtagcagctgtagctcagcccctatgtgtgccatctgcctggaggagttctct
gagggccaggagcttcgggtcatttcttgcctccatgagttccatcgctcctgtgtggac
ccctggctacatcagcatcggacttgtcccctctgcatgttcaacatcgtagagggagat
tcattttcccagccccttggaccctctcgatcttatcaggaaccaggcaggagactccac
ctcattcgccagcatcctggccatgcccactatcacctccctgctgcctacctgttgggc
ccttctcggaattcaggcactcggccccctcgacctagaccctttttaccatcccaggag
cctcggcaccaacgtatccccagagctgcacatctccgggctgcaggtgaacaacagcgc
caggcagtggctcagcacccctatgctcagggatgggggctgagccacttccgatgcaca
tctcagcaccccacatcttgcccagcgcctctgcgccgggctaggcctcatgacagcagt
gggtctggagaaagctactgtacagaacgcagtggctacctggcagatgggccagccagt
gattccagttcggggccctgtcatggctcttccagtgactcagtggtcaactgtacagac
atcagcctgcaaggcatccatggcagcagctctactttccgcagctccctgagcagtgac
tttgaccccttggtgtactgtagccctcaaggggacctacagggggaagagatgcaatcc
agtgtgacctctcggccccgttccttggactcagtagtgcccactggggaaacccaggtt
tctagccatgtccattaccaccggcaccgacactaccactacaaaaagcggttccagtgg
catggcaggaagtctggcccagaaactggagtcccccagtccaggcctgctgtttctcgg
acacagcctcagccagagccaccttttcctgatcagcaagtcaccaaatccaacccagca
gctctttcggggcagccctccaatccacaacggcccagggccctcacagagccagctcct
gacccacctgaagctgccagttccagccccagttcccctggtcttttaaacttgcagaaa
tccagcctcactgttcgacatccacagagaaaacggcggggtggtccctcagatcccact
ccaacctctcggcctcaggatttgactgtgcacccagcttgccagatgttccctcattac
agccccagcctggcatacctttggcccccagaggcccacccgttggtctttagacctcca
ggcctggatagaaggttgctaccagaagatccaggcccctgttactcaagttcacagcca
gtgtggttgtgtttgacttcacgccagcccttgggtcctcacccacctggggaggggcct
tctgaatggagttctgacaccccagagagcaggccgtgccctcacccacactgccagatg
tcgccagcccagccagcccctgaggacatgggacttgccagccagggaatccaggatcag
aggaggagcttgaggagctgtgtgaacagactgtgtgagatggtcaggccaagctccaac
caagagtgtgcttcagtcatttag
DBGET
integrated database retrieval system
