KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963400
Entry
101963400         CDS       T10664                                 
Symbol
Pdgfb
Name
(RefSeq) platelet-derived growth factor subunit B
  KO
K17386  platelet-derived growth factor subunit B
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti01521  EGFR tyrosine kinase inhibitor resistance
iti04010  MAPK signaling pathway
iti04014  Ras signaling pathway
iti04015  Rap1 signaling pathway
iti04020  Calcium signaling pathway
iti04072  Phospholipase D signaling pathway
iti04151  PI3K-Akt signaling pathway
iti04510  Focal adhesion
iti04540  Gap junction
iti04630  JAK-STAT signaling pathway
iti04810  Regulation of actin cytoskeleton
iti05167  Kaposi sarcoma-associated herpesvirus infection
iti05200  Pathways in cancer
iti05206  MicroRNAs in cancer
iti05211  Renal cell carcinoma
iti05214  Glioma
iti05215  Prostate cancer
iti05218  Melanoma
iti05231  Choline metabolism in cancer
iti05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:iti00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    101963400 (Pdgfb)
   04014 Ras signaling pathway
    101963400 (Pdgfb)
   04015 Rap1 signaling pathway
    101963400 (Pdgfb)
   04630 JAK-STAT signaling pathway
    101963400 (Pdgfb)
   04020 Calcium signaling pathway
    101963400 (Pdgfb)
   04072 Phospholipase D signaling pathway
    101963400 (Pdgfb)
   04151 PI3K-Akt signaling pathway
    101963400 (Pdgfb)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101963400 (Pdgfb)
   04540 Gap junction
    101963400 (Pdgfb)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    101963400 (Pdgfb)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    101963400 (Pdgfb)
   05206 MicroRNAs in cancer
    101963400 (Pdgfb)
   05231 Choline metabolism in cancer
    101963400 (Pdgfb)
  09162 Cancer: specific types
   05214 Glioma
    101963400 (Pdgfb)
   05218 Melanoma
    101963400 (Pdgfb)
   05211 Renal cell carcinoma
    101963400 (Pdgfb)
   05215 Prostate cancer
    101963400 (Pdgfb)
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    101963400 (Pdgfb)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    101963400 (Pdgfb)
  09176 Drug resistance: antineoplastic
   01521 EGFR tyrosine kinase inhibitor resistance
    101963400 (Pdgfb)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:iti04052]
    101963400 (Pdgfb)
   00536 Glycosaminoglycan binding proteins [BR:iti00536]
    101963400 (Pdgfb)
Cytokines and neuropeptides [BR:iti04052]
 Cytokines
  Growth factors (RTK binding)
   101963400 (Pdgfb)
Glycosaminoglycan binding proteins [BR:iti00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   101963400 (Pdgfb)
SSDB
Motif
Pfam: PDGF PDGF_N
Other DBs
NCBI-GeneID: 101963400
NCBI-ProteinID: XP_040137731
LinkDB
Position
Unknown
AA seq 304 aa
MNRCWALFLSLCCYLRLVSAEGDPIPEELYEMLSDRSIRSFEDLQRLLHSDSVGKSHPPP
CPGPWPLVPLPCPGLCGGAGRDPQTWGPCSPPAFQGGPSHTRLGRRRAHRLVPGCGVWRR
SAHVWLGSPGRCGLRQDPPDAAPLPVGPLAAAEPAMIAECKTRTEVFEISRRLLDRTNAN
FLVWPPCVEVQRCSGCCNSRNVRCRPAQVQLRPVQVRKIEIVRKKPTFKKATVTLEDHLA
CKCETVVSARPVTRSPAGSQEQRARTPQTRVTIRTVRVRRPPKGKHRKFKHTHDKTALKE
TLGA
NT seq 915 nt   +upstreamnt  +downstreamnt
atgaatcgctgctgggcgctcttcctgtctctctgctgctacctgcgtctggtcagcgcc
gagggggaccccattcccgaggaactctatgagatgctgagtgaccgctccatccgctcc
ttcgaggacctccagcgcctgctgcacagtgactccgtaggtaaatcgcatcctcccccc
tgccctggcccctggcccctggtgcctctgccatgccctggcctctgtggaggagctggg
agggacccacagacctggggcccctgcagccctcctgccttccagggagggcccagccac
acccgcctcggcagacggagggcacacaggttggtacctggatgtggggtgtggcggaga
agcgcccacgtgtggctggggagcccggggcggtgcgggctcaggcaggaccctcctgac
gcggctcccctccccgtagggcccctggcagcggcggagccagccatgatcgccgagtgc
aagacgcgcaccgaggtgttcgagatctcgcggcgcctgctggaccgcaccaacgccaac
ttcctggtgtggccgccgtgcgtggaggtgcagcgctgctctggctgttgcaacagccgc
aacgtgcgctgccggcctgcgcaggtgcagctgcggcccgtgcaggtgagaaaaatcgag
atcgtgcggaagaagccaacctttaagaaggccacggtgaccctggaggaccacctggcc
tgcaagtgtgagacggtggtgtctgcgcggcctgtgacccggagccccgcgggttcccag
gagcagcgagccaggacaccccagactcgggtgaccattcggaccgtgcgagtccgccgg
ccgcccaaggggaagcaccggaagttcaagcacacacacgacaagacggcgctgaaggag
accctcggggcctag

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