Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963458
Help
Entry
101963458 CDS
T10664
Symbol
Prdm13
Name
(RefSeq) LOW QUALITY PROTEIN: PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iti03000
]
101963458 (Prdm13)
Transcription factors [BR:
iti03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
101963458 (Prdm13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_7th_ZNF462
zf-BED
zf-C2H2_15
Zf-C2H2_ZNF451
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
101963458
NCBI-ProteinID:
XP_040139077
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MPDRVTPQAEDARRGAAPWLARGXWLCHLRPEEDPARPSACLAAVATMHGTVRAPATSVS
ADCCIPAGLRLGPVPGTFKLGKYLSDRREPGPKKKVRMVRGELVDESGGSPLEWIGLIRA
ARNSQEQTLEAIADLPGGQIFYRALRDVQPGEELTVWYSNSLAQWFDIPTTATPTHDEKG
EERYICWYCWRTFRYPNSLKAHLRFHCVLSGAGARAFLHHEHAARQGAAPADGLDLSPKP
SAADFAVPAQAGTLRSQSQAAQTPQACGARESIKREASSVLSATSPPPGKWGLPKKGKEQ
SDRALDMSATARAHGHFLGIVGGSPPGSGGLAFYPGVRSAFKPAGLARAAAASHGDPYRE
EGGGKQGAGLALGRLLGGGRAGGRPGSGENPAAGGAGHHHHHHAHHHHPKCLLAGDPPPP
PPPGLPCSGPLRGFPLLPGHPEEASAFKHVERAPPATAALPGARFAQLPPAPGLPLERCA
LPPLDAGGLKPYPGGECSHLSTVMPAFTVYNGELLYGSPAAAAYYPLKLHFGGLLKYPES
ISYLXXXXXXXXXXXXXXXXXXXLSPAELGSLASIDREIAMHTQQLSEMAAGKGRGRLDS
GTLPPAVMTAGGGGSGGSSGGGAGKPKTGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKC
KVCLRPFGDPSNLNKHIRLHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQTLLAKAA
DGPGAEPGYPLEPGDPKSDDSDVDVCFTDDQSDAEAGGGLERDS
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaccgcgtcactccgcaggcggaggacgcacgtcggggcgcggctccctggcta
gcacgcggantctggctctgtcacttgcgccctgaagaggacccggcgcgccccagcgcc
tgcctggcggcggtggcaacaatgcatggaaccgtccgcgccccggccaccagcgtgagt
gcagactgctgcatccccgccggcttgcgcctcgggccggtccccggcaccttcaagctg
ggcaagtacctgtcagatcgcagggaacccgggcccaagaaaaaggtgcgcatggtgaga
ggggagctggtggacgagtctgggggctcccctctggagtggatagggttaatccgggca
gccaggaattcccaggaacagactctggaagctattgcagacttacccggaggacagatc
ttctaccgagcacttcgagatgtccagccaggggaagagctgaccgtgtggtattccaac
tccttggctcagtggttcgacatccctacaacagcgactccaacacacgatgagaaaggg
gaggaacgctacatttgctggtactgctggaggacgtttagataccctaacagccttaag
gcacacctgcgtttccactgcgtgctcagtggagctggggcccgcgccttcctccaccac
gagcacgcagctcgccaaggcgctgccccggcggatggcctcgacctctccccgaaaccc
agtgcggctgacttcgccgtgccggctcaggcaggcaccttacggtcccaatcacaggcc
gcgcagactccccaggcctgtggggcgcgggaaagcatcaagcgcgaggcctcctcggtg
ctttcagccacttcgccacccccgggcaagtggggacttcccaagaagggcaaagagcag
tcggaccgtgccctggacatgagcgcgacagcccgagcacacggtcacttcctaggcatt
gtggggggttccccacctggtagcggcggcctggccttctacccaggtgtgcgctcagct
ttcaaacccgctggtttggccagggcggccgctgcctcgcatggcgacccctaccgggag
gagggaggcggcaagcagggggctggactagctttggggaggctcctgggaggaggccgg
gcaggcgggcgccccgggagtggggagaacccggcagcgggaggagcgggccaccaccat
caccaccacgcacaccaccaccatcccaagtgcctgctcgcaggagacccgcctccgccg
cctcctccaggcctgccctgctccggtcccctgcgtggcttccccctgctcccgggccac
ccggaagaagcttctgccttcaagcacgtggaacgtgccccgcccgctaccgctgcgctg
ccgggagcgcgtttcgctcaactgcccccagcgcccgggctacccctggagcgctgcgct
ctaccgcccctcgacgcgggcgggctgaagccctatccgggtggcgagtgcagccacctg
tccaccgtcatgccggcctttaccgtctacaatggagaattgctctacggctcaccggcc
gctgcagcttattatccgctcaaactgcatttcggtggcctgctcaaatatccagagtcc
atctcctacttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnctgagccccgcggagttgggttccctggccagcatcgacagagagatcgcc
atgcacacgcagcaactgtccgagatggcggccgggaagggtcgcggccgcttggattca
ggaacgctgccgccggccgtcatgacggcgggaggcggtggcagcggtggcagcagtggc
ggtggcgcgggtaagcccaagacgggccacctgtgcctctactgcggcaagctgtactcg
cgcaaatacgggctcaagattcacatgcggacgcacacgggctacaagccactcaagtgc
aaagtatgcctgcggccttttggcgaccccagcaatctcaacaagcacatccgactgcac
gccgagggcaacacgccctaccgctgcgagttctgcggcaaggtgcttgtgcgacgacgg
gacctggagcgacacgtcaagtcccgccaccccggccagactctgctcgccaaggcagcc
gatggcccgggcgccgagccgggctatcccctggagcctggggatcccaagagcgacgac
agtgatgtggacgtatgcttcactgacgaccagagcgacgccgaagccgggggcggcttg
gagcgcgactcgtaa
DBGET
integrated database retrieval system
