Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963461
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Entry
101963461 CDS
T10664
Symbol
Sptbn4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04517
IgSF CAM signaling
iti04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101963461 (Sptbn4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101963461 (Sptbn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
iti04812
]
101963461 (Sptbn4)
Cytoskeleton proteins [BR:
iti04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
101963461 (Sptbn4)
Intermediate filaments
Intermediate filament-binding proteins
101963461 (Sptbn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Rv3651-like_N
PH_11
FlgK_D1
Motif
Other DBs
NCBI-GeneID:
101963461
NCBI-ProteinID:
XP_021589672
LinkDB
All DBs
Position
Unknown
AA seq
2571 aa
AA seq
DB search
MAQVPGEVDNMEGLPAPNNNNLAARWESPDRGWEREPPAASTAAASLFECSRIKALADER
EAVQKKTFTKWVNSHLARVGCHIGDLYADLRDGFVLTRLLEVLSGEQLPRPTRGRMRIHS
LENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRET
RSAKDALLLWCQMKTSGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDFGKLTKSNANY
NLQRAFRTAEQHLGLARLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRIGK
VLDQVLEVGKIIERYEELAAELLAWIHRTVGLISNQKFANSLSGVQQQLQAFTAYCTLEK
PVKFQEKGNLEVLLFSIQSKLRACNRRLFVPREGCGIWDIDKAWGQLEKAEHEREAALRA
ELIRQEKLELLAQRFDHKVAMRESWLNENQRLVSQDNFGYELPAVEAAMKKHEAIEADIA
AYEERVQGVAELAQALAAEGYYDARRVAAQRDSVLRQWALLTGLVGARRTRLEQNLALQK
VFQEMVYMVDWMEEMQAQLLSRECGQHLVEADDLLQKHGLLEGDIAAQSERVEALNAAAL
RFSQLQGYQPCDPQVICNRVNHVHGCLAELQEQASRRRAELEASRSLWALLQELEEAESW
ARDKERLLEAAGGGGGGGAGAAGGAHDLSSTARLLAQHKILQGELGGRRALLXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRWQRLEEAAARRERRLQEARAL
HQFGADLDALLDWLRDAYRLAAAGDFGHDEASSRRLARQHRALTGEVEAHRGPVGGLRRQ
LATLGGASGAGPLVVALQVRVVEAEQLFAEVTEVAALRRQWLRDALAVYRMFGEVHACEL
WIGEKEQWLLAMRVPDSLDDVEVVQHRFESLDQEMNSLMGRVLDVNHTVQELVEGGHPSS
EEVRSCQDHLNSRWNRIVELVEQRKEEMSAVLLVENHVLEVAEVRAQVREKRRAVESAPR
AGGALQWRLSGLEAALQALEPRQAALLEEAALLAARFPAQATRLHQGAEELGAEWGALAS
SAQACGEAVAAAGRLQRFLHDLDAFLDWLVRAQEAAGGGEGPLPSSLEEADALLARHAAL
KEEVAQREEDYARIVAASEALLAADSAELGPGLALDEWLPHLELGWHKLLGLWEARREAL
VQAHVYQLFLRDLLQALTVLRNQEVALSGVELPGTVESVEEAIKRHRDFLTTMELNQQKM
QVAVQAAEGLLRQGNAYGEQAQEAVARLLEKSQENQLRAQQWMQKLHDQLGLQHFLRDCH
ELDGWIHEKMLMARDGSREDGHKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLMQEKP
ELAASVRKKLGEIRQCWAELESTTQAKARQLFEASKADQLVQSFAELDKKLLHMESQLQD
VDPGGDLATVNSQLKKLQSMESQVEEWYREVGELQAQTAALPLEPASKELVGERQNAVGE
RLVRLLEPLQERRRLLLASKELHQVAHDLDDELAWVQERLPLAMQTERGSGLQAVQQHIK
KNQGLRREIQAHGPRLEEVLERAGALASLRSPEAEAVRRGLEQLQSAWAGLREAAERRQQ
VLDAAFQVEQYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEE
SIAQLSRQCRALLEMGHPDSEQISRRQSQVDRLYVALKELGEERRVGLEQQYWLYQLSRQ
VDELEHWIAEKEVVAGSPELGQDFEHVSVLQEKFSEFASETGTAGRERLAAVNQMVDELI
ECGHTAAATMAEWKDGLNEAWAELLELMGTRAQLLAASRELHKFFSDARELQGQIEEKRR
RLPRLTAPPEPRPSASSMQRTLRAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEHAEAIAS
REQEVLQGWKELLAACEDARLHVSSTADALRFHSQARDLLSWMDGIAGQIGAADKPRDVS
SVEVLMNYHQGLKTELEARVPELTACQELGRSLLLNKSAMADEIQAQLDKLGTRKEEVSD
KWDRHWEWLQQMLEVHQFAQEAVVADAWLTAQEPLLQSRELGSSVDEVEQLIRRHEAFRK
AAAAWEERFSSLRRLTTIEKIKAEQSKQPPTPLLGRKFFGDPTELAAKAAPLLRPGGYER
GLEPLARRASDTLSAEVRTRVGYVRQELKPERLQPRIDRLPEVPGRVEPAAPPAAPENIA
AETPGTPAAAEQVRPRPERQESADRTEELPRRRRPERQESADQPEESARRRRPERQESAE
HEVAHSLTLGRYEQMERRRERRERRLERQESSEQETPVRGELAKGKATLADIVEQLQEKE
AGPGLPVGVPSLPQPRELPPGRLPNGLEPPERTPRPDRPRARDRPKPRRRPRPREGGEGG
GSRRSRSAPAQGGSAPAPPPPPTHTVQHEGFLLRKRELDANRKSSNRSWVSLYCVLSKGE
LGFYKDSKGPASGGTHGGEPLLSLHKATSEVASDYKKKKHVFKLQTQDGSEFLLQAKDEE
EMNGWLEAVAASVTEHAEIARWGQTLPTTSSTDEGNPKREGGERRASGRRK
NT seq
7716 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggttccaggggaggtggacaacatggagggcctgcccgcccccaacaacaac
aaccttgcagctcgctgggagagtccagaccggggctgggagcgggaacctccagctgct
tccacagcagctgcttctctcttcgagtgctcaaggatcaaggccttggcagacgagcgg
gaggccgtgcagaagaaaaccttcaccaagtgggtgaactcgcacctcgcccgcgtgggc
tgccacatcggggacctctatgcggacctccgggatggctttgtgctgactcggctcctg
gaagtgctgtcgggggagcagctgccgaggcccacacggggccgcatgcggatccactcg
ctggagaacgtggacaaggctctgcagttcctcaaggagcagcgtgtgcacctggaaaac
gtgggctcgcatgacatcgtggacgggaatcaccgactcacgctggggttggtctggacc
atcatcctgcgcttccagattcaggtcatcaaaattgagaccgaggacaacagagagacg
cgctctgccaaggacgctctgctcctgtggtgccagatgaagacgtctggttaccccgag
gtaaacatccagaatttcaccaccagctggcgggacggcttggccttcaatgccctcatt
catcggcacaggcctgaccttgtggacttcggcaaactcaccaaatccaacgccaactac
aacctgcagagagccttccgcacagctgagcagcacctggggctggcgcgtctgctggac
cccgaagacgtgaacatggaggctcccgatgagaagtctatcatcacctatgtggtctct
ttctaccactacttctccaagatgaaggccctggctgtggaggggaagcggattgggaag
gtgctggaccaggtgctggaggtgggcaagatcatagagcgctatgaggagctggcggct
gagctgctggcttggatccaccgcaccgtgggcctcatcagcaaccagaagtttgccaac
tcgctgagtggggtgcagcagcagctgcaggctttcacggcctattgcaccctggagaag
cccgtcaagtttcaggaaaaggggaacttggaggtactgctcttcagcatccagagcaaa
ctgcgtgcctgcaaccgtcgcctttttgtgcctcgggagggctgtggcatctgggatatc
gacaaggcatggggccaactggagaaggcagagcatgagcgggaggctgccctacgggct
gagctgatccggcaggaaaagctggaactcctggcccagaggttcgaccacaaggtggcc
atgagggagagctggctgaatgagaaccagcgcctggtctctcaggacaactttgggtat
gagttgccagcagtggaggcagccatgaagaagcacgaagcgattgaggcagacattgca
gcctacgaggagcgggtgcagggtgtggcagaactggcccaggcattggcagctgaaggc
tactatgatgcccggcgggtggcagcccagcgtgacagcgtcctgcgtcagtgggccctg
ctgactgggctggtaggtgcccggcggacccgactggagcagaacctggccctgcagaag
gttttccaggagatggtctacatggtggactggatggaggagatgcaggctcagctgctg
tcccgggagtgtgggcagcacctggtggaggcggacgacctgttgcagaagcatggcctg
ctggagggggacatcgctgcccagagcgagagggtggaggctctcaatgctgcagccctg
cgtttctcccagctgcagggctaccaaccctgcgacccgcaggtcatctgcaaccgcgtg
aaccacgtgcacggctgtctggcggagctgcaggagcaggcgtcgcggcgtcgcgcggag
ctggaggcttcgcggagcctgtgggcgctgctgcaggagctggaggaggcagagagctgg
gcccgggacaaggagcgcctcctggaggccgcgggcggcggcggcggcggcggggcaggc
gcggcgggtggcgcacacgacctgtccagcaccgcgcgccttctggcgcagcacaagatc
ttgcagggcgagctaggcgggcggcgggcgctgctgcnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggcgccgctgg
cagcgactggaggaggcggcggcgcggcgcgagaggcggctgcaggaggcgcgggccctg
catcagtttggcgccgaccttgacgcactgctggactggctccgcgacgcttaccgcctg
gcagccgccggcgactttggtcacgacgaagcgtccagtcgccgcctggcacgccagcac
cgcgctctcaccggggaggtggaggcgcatcgcgggccggtgggcggcctgcggcgccag
ttggcgacactggggggcgccagcggggccggacctctggtggtggcactacaggtgcgt
gtggtagaggccgagcagttgttcgccgaggtgaccgaggtggccgcactgcggcgccag
tggctgcgggacgcgctcgccgtgtaccgaatgttcggggaggtgcacgcgtgtgagctg
tggatcggtgagaaggagcagtggttactcgccatgcgtgtgcccgactcgctggacgac
gtggaggtggtacagcaccgattcgagagtctggaccaggagatgaacagtctgatgggc
cgtgtcctggatgtgaaccacacggtccaggagctagtggaagggggtcaccccagctca
gaagaggtacgctcctgccaggaccacctcaacagcaggtggaaccgcatcgtggagctg
gtggaacagcgcaaagaggagatgagcgcggtactgctggtggagaaccacgtgctggag
gtagccgaggtgcgcgcccaggtgcgcgagaagcggcgagccgtggagagcgcaccccgc
gctggcggcgccctgcaatggcgcctcagcggccttgaggctgctttgcaagcgctcgag
ccgcgccaggcggcccttttggaggaggcagccctgctggccgcgcgctttcccgcacag
gcgacgcggcttcaccagggcgcggaggagctgggagccgagtggggcgcgctggccagc
tcagctcaggcctgcggcgaggcggtggcggcggctggacgtttacagcgtttcctgcac
gacctggacgctttcctggactggctcgtgcgcgcccaggaggcggcgggcggcggggag
ggccccctgcccagcagcctggaagaggcggacgcgctgttggcgcgccacgcggcgctc
aaggaggaggtggcccagcgcgaggaggactatgcgcgcattgtggcagccagcgaagcg
ctgctggcggcagacagcgccgagctcggcccaggcctggcgctcgacgaatggctgcca
cacctcgaacttggctggcacaaactgctcggcttgtgggaggcgcgcagggaggcgctg
gtgcaggcgcacgtctaccagctcttcctgcgcgacctactccaagcgctcactgtgctg
cgcaaccaggaggtggcgctgtctggtgtggagctcccgggcaccgtggagtcggtggag
gaggcgataaaaaggcaccgggattttctcaccacgatggagctgaaccagcagaagatg
caggtggccgtgcaggcggctgagggcctgctgaggcagggcaacgcctatggggagcag
gcccaggaggctgtggcccggctgctggagaagagccaagaaaaccagctacgggctcag
cagtggatgcagaagctccatgaccagcttgggctgcagcacttcctccgagactgccac
gagctggatggctggatccatgagaagatgctgatggcgcgagatggttctcgagaagat
ggccacaagctgcacaagcgatggctccggcaccaggcgttcatggccgagctggctcag
aataaggagtggctggagaagatcgagagggagggccagcaactgatgcaggagaagccg
gagttggcggcctccgtgcggaagaagctgggtgagatccggcagtgctgggcagaactg
gagagtaccacccaggccaaggcccggcagctcttcgaagccagcaaggccgaccagctg
gtgcagagcttcgcggagctggacaagaagctccttcacatggaaagccagctccaagat
gtggaccccggtggcgacctggctacagtcaacagccagctcaagaaattacagtcgatg
gagtcccaggtggaggagtggtaccgcgaggtaggagagttgcaggcgcagacggcggcg
cttcctttggagccggcgagcaaggagctggtgggcgagcggcagaacgcggtgggcgag
cggctggtgcgcctgctggagccgttgcaggagcgtcgccgcttgctgttggcctccaag
gagctgcatcaggtggctcacgacctagacgacgagctggcatgggttcaggagcggctg
ccactggccatgcagacagaacgaggcagtggtttacaggctgtccagcagcacatcaaa
aagaaccagggcctgcggcgggagatccaggcgcatgggccgcgcctggaggaggtgttg
gagcgcgcgggcgcgctggcttcgctgcgcagcccagaggcggaggccgtgcgccgtggc
ctggagcaactgcagagcgcctgggcaggactgcgcgaggcggctgagcggaggcagcag
gtgctggacgccgccttccaggtggaacagtactacttcgacgtggccgaggtggaggcg
tggctgggcgagcaggagctgctcatgatgagtgaggacaagggcaaggatgaacagagc
accctgcagctgctcaagaagcacctgcagctggagcagggcgtggagaactacgaagag
agcatcgcgcagctgtcgcgccaatgccgggcgctgctggagatggggcacccggacagc
gagcagatcagccggcggcagtctcaggtggaccgcctgtacgtggcgctcaaggagctt
ggggaggaacgaagggtgggcctcgagcagcagtactggctgtaccagctcagtcgccag
gtggatgagctagagcactggattgctgagaaggaggtggtggctggttcaccagagctg
ggccaggacttcgagcatgtctcggtgctgcaggagaaattctcagagttcgccagtgag
acgggcacggcaggacgtgagcggctggcagctgtgaaccagatggtggatgagctgatc
gagtgtggccatacggcagcagccaccatggctgagtggaaggatgggctgaacgaggcc
tgggccgagctgctggagctcatgggtactcgggcccagctgctggccgcctctcgggag
ctgcataagttcttcagtgatgcccgagagcttcaaggacaaattgaggagaagcggagg
cgactgcctcgacttactgccccacctgagccaagacccagtgccagctccatgcagagg
accttacgagcctttgagcatgatctgcagctcctcgtgtcccaggtacggcagctgcag
gagggcgctgcccagctgcggaccgtgtacgcgggcgagcacgccgaggccatcgccagc
cgcgagcaagaggtgctgcagggctggaaagagctgctggcagcctgcgaggacgcccgc
ctgcacgtcagctccacggccgacgccctgcgcttccacagccaggcccgcgacctgctc
tcctggatggacggcatcgcgggccagatcggggcagctgacaagcccagggatgtgtca
tcggtggaggtgctcatgaactaccaccagggcctgaagactgagctggaggcacgggtg
cctgagctgactgcctgccaggagctggggcgctcccttctgctcaacaagagtgctatg
gctgatgagatccaggcacagctggacaaactgggaaccaggaaggaggaggtgtcagac
aaatgggaccgccattgggagtggctgcagcagatgctggaagtgcatcagtttgcccag
gaggcagtggtggctgatgcctggctgacagcccaggagccactcctgcagagccgggag
ctgggcagcagcgtggatgaggtagagcagcttatccggagacacgaggccttccgcaag
gcagccgcagcctgggaagagaggttcagctctctgcgacgcctgactacgattgagaaa
atcaaggcagaacaaagcaagcaaccacccactcccctgctggggcgcaagttctttggg
gaccccacggaactggcggccaaggcggcacctttactgcggccagggggctatgaaagg
ggcttggagcccttggcccgccgggcctcggacacgctgtcagccgaggtgcggacccgg
gtggggtacgtgcgccaggagctcaagcccgagcgcctccagccgcgcattgaccggctg
ccggaggtccccgggagggtagagcctgcggcccctccggccgcaccggagaacattgca
gcggagactcccgggacccctgcggctgcggagcaggtccggcccagaccagagcgccag
gaatcagcggatcgcacggaggagctgccccggaggcggcggccagagcgccaagaatcg
gctgaccaacccgaggagtctgcgcggaggaggagaccagaacgacaggaatccgcggag
catgaggtggcacatagccttacactgggccgctatgagcagatggagaggcggcgcgag
cggcgcgagcggcggttggagcggcaggagtccagcgaacaggagacgcccgtaagagga
gagctggccaaagggaaggctaccctggctgacattgtggagcagctgcaggagaaagag
gcgggcccagggctcccggttggggtgccgtcgctgcctcagcctcgcgagcttccccct
ggccgcctgcccaacgggcttgagccgcccgagcggacacctcggccggatcggccgcgg
gcgcgggaccggcccaagccgcgacggcggccgcggccacgagagggtggtgagggcggg
ggaagccggcgctcgcgctccgccccggcccagggaggctccgcccccgcgcctccgcca
ccgcccactcacacagtgcagcacgagggcttcctgctgcgcaagcgcgagctcgacgct
aaccgcaagtcctccaaccggtcgtgggtgagcctgtactgcgtcctcagcaagggggag
ctgggcttctacaaggactccaaaggcccagcatcagggggaacacatggtggggagcca
ctgctcagcctgcacaaggccaccagcgaggtggctagtgactacaagaaaaagaagcat
gtcttcaagctccagacccaggatggcagtgaatttttgctccaggctaaagatgaggag
gagatgaacggttggctagaagctgtagctgcctcagtgacagaacacgcagagattgca
cgctggggccagacactacccacaacgtcctccacagacgaaggcaaccccaagcgcgag
ggaggggagcgcagagccagcgggcgccggaagtga
DBGET
integrated database retrieval system
