Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963544
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Entry
101963544 CDS
T10664
Symbol
Lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03018
RNA degradation
iti03040
Spliceosome
Brite
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101963544 (Lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
101963544 (Lsm4)
Spliceosome [BR:
iti03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
101963544 (Lsm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
101963544
NCBI-ProteinID:
XP_005333056
UniProt:
I3MRN3
LinkDB
All DBs
Position
Unknown
AA seq
139 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRGGI
PGTGRGQPEKKPGRQAGKQ
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccttgtcgctactgaagacagctcagaaccaccccatgttggtggagctcaag
aatggggagacgtacaatgggcacctggtgagctgtgacaactggatgaacatcaacctg
cgggaggtgatctgcacgtccagggatggggacaagttctggcggatgcccgagtgctac
attcgaggcagcaccatcaagtacctgcgcatccccgacgagatcatcgacatggtcaag
gaggaggtggtggccaagggccggggccgcggtggcttgcagcagcagaagcagcagaaa
ggccgcggcatggggggcgctgggcgaggtgtgtttggcggccggggccgaggcgggatc
cctggcacaggccgaggccaacctgaaaagaagccgggcaggcaggcgggcaagcagtga
DBGET
integrated database retrieval system
