Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963593
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Entry
101963593 CDS
T10664
Symbol
Fbxl20
Name
(RefSeq) F-box/LRR-repeat protein 20 isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101963593 (Fbxl20)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101963593 (Fbxl20)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_4
F-box-like
LRR_6
F-box
LRR_At5g56370
LRR_8
LRR_EndoS
LRR_RPS2
LRR_At1g61320_AtMIF1
F-box_4
Motif
Other DBs
NCBI-GeneID:
101963593
NCBI-ProteinID:
XP_005321829
UniProt:
I3NG45
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MRSGVAGRWGVFLFWVEVEAEERAELATSSRRGRWSRGRWRRPLSSLEVSAALPTPPALP
LRCRLPVPELSGLPWAPVFALRTPQRPARAAPAGPMRRDVNGVTKSRFEMFSNSDEAVIN
KKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENI
SKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKL
RHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGC
TQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAIL
NALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCP
RLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIE
LYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPPSVGGSRQRFCRCCIIL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcggcgttgctggcaggtggggagtgtttttgttttgggttgaagttgaggct
gaggagagagccgagctagcgacgagcagtcgtcgcggccgctggagccgcgggaggtgg
cggaggcccctcagtagcctagaagtctctgctgcccttccgacgccccctgctttgccc
ctccgctgtcggctcccggtcccggaactctccggcctgccctgggcccctgtgtttgca
ctccgcacgccgcagcgcccggcccgggccgcacccgccggccccatgaggagagacgtg
aacggagtgaccaagagcaggtttgagatgttctcaaatagtgatgaagctgtaatcaat
aaaaaacttcccaaagaactcctgttacggatattttcttttctggatgttgttaccttg
tgtcgctgtgctcaggtctccagggcctggaatgttctggctctggatggcagtaactgg
caacgaattgacctgtttgatttccagagagatattgagggtcgagtagtggagaatatt
tcaaaacgatgtgggggctttttacgaaagttaagtcttcgtgggtgtcttggagtagga
gacaatgcattaaggacctttgctcagaactgtaggaacattgaagtattaaatctaaat
gggtgtacaaagactacagacgctacatgtactagccttagcaagttctgttccaaactc
aggcatcttgacttggcttcctgtacatcaataacaaacatgtcactgaaagctctgagt
gaggggtgtccactgttggagcagttgaacatttcctggtgtgatcaagtaaccaaggat
ggcattcaagcactagtaagaggctgtgggggtctcaaggccttattcttaaaaggctgc
acacagctggaagatgaagctctcaagtacataggtgcacactgccctgaactggtgact
ttaaacttacagacttgcttacaaatcacagatgaaggcctcattactatttgcagaggg
tgccataagttacagtccctctgtgcctctggctgctccaacatcacagatgccatcctg
aatgctctaggtcagaactgccctcggcttagaatattagaagtggcaagatgttctcaa
ttaacagatgtgggctttaccactctagccagaaattgccatgagcttgaaaagatggac
ctggaagaatgtgttcagataacagatagcacattaatccaactttctatacactgtcct
cggcttcaagtattgagtctatctcactgtgaactgatcacagacgatggaattcgtcac
ctaggaaatggggcctgcgcccatgaccagctggaggtgattgagctggacaactgccca
ctaatcacagatgcatccttggagcacttgaagagctgtcacagccttgagcggatagaa
ctatatgactgccagcaaatcacacgggctggaatcaagagactcaggacccatttaccc
aatattaaagtccatgcctacttcgcacctgtcactccacccccatcagtagggggcagc
agacagcgcttctgcagatgctgcatcatcctatga
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