KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963612
Entry
101963612         CDS       T10664                                 
Symbol
Hltf
Name
(RefSeq) helicase-like transcription factor isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:iti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:iti04121]
    101963612 (Hltf)
   03400 DNA repair and recombination proteins [BR:iti03400]
    101963612 (Hltf)
Enzymes [BR:iti01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101963612 (Hltf)
Ubiquitin system [BR:iti04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101963612 (Hltf)
DNA repair and recombination proteins [BR:iti03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    101963612 (Hltf)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_2 DEAD RING_XB3-XBAT31 zf-RING_5 ResIII zf-ANAPC11 zf-C3HC4_4 HDA2-3 zf-Nse Prok-RING_4 zf-rbx1
Other DBs
NCBI-GeneID: 101963612
NCBI-ProteinID: XP_013214264
LinkDB
Position
Unknown
AA seq 1016 aa
MSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPRFEFQDIIPPDDFLTSDEELDSVLF
GTLRGHVVGLRYYTGVVNNNEMVALQREPNNPYDKNAIKVNNVNGNQVGHLKKDLAAALA
YIMDNKLAQVEGVVPFGANNAFTMPLQMTFWGKEENRKAVLDQLKKHGFKLGPAPKTVGF
NLESSWSSGRAGPSYSMPVHAAVQMTAEQLKTEFDKLFEDLKEDDKTHEMEPAEAVETPL
LPHQKQALSWMISRENSQELPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGK
TLTAIAVILTNFHDGKPLPVERIKKNQLKKECKECNVKDESEKLGGNSSTEKADGQGKER
SRCSEEPSISHIKEKKKCSMSELSSSRPKRRKITVQYVESSDSEEIEASELPQKTKGKLK
NIQSETKSRAKAGSSKVKEDAAFACALTSPSPATKKKTLKRGASSVEGSKKTDVEERPRT
TLIICPLSVLSNWIDQFGQHIKSEVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILTHD
YGTKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAALDLEAERRWVLTGTPIQNSLKDLW
SLLSFLKLKPFIDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLE
LPERKVFIQHITLSDEERKIYQSVKNEGKATIGRYFNEGTVLAHYADVLGLLLRLRQICC
HTHLLTNAVSSSGSSAFSLGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVIT
HCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHGDNLLECPPEELACDSEKKSNMEWTSSS
KINALMHALIDLRKKNPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRAES
IQCFQNTEAGSPTIMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQ
EVIITKFIVKDSVEENMLKIQNTKRELAAGAFGTKKSNANEMKQAKINEIRTLIDL
NT seq 3051 nt   +upstreamnt  +downstreamnt
atgtcctggatgttcaagagggatcctgtttggaagtatttgcagactgttcagtatgga
gtccatggaaattttccacgcctctcatatccaactttctttccacgttttgaattccaa
gatattatccctccagatgacttcctaactagtgatgaggagctggattcagtgttattt
ggaactttgagaggtcatgtagttggactacgctattacacaggagtagttaataataat
gaaatggttgcattacaacgagagcctaataacccctatgataagaatgccattaaagta
aacaatgtgaatggaaatcaggttggacatttaaagaaagatctggcagctgctttggct
tatatcatggacaacaaattggcacaagtggaaggggtagttccttttggtgcaaacaat
gctttcaccatgcctttgcaaatgactttttggggaaaagaagaaaatagaaaagctgtt
ttagatcaattgaagaaacatggatttaaattgggtcctgcaccaaaaactgtgggattc
aatttggaaagtagttggagctctggaagagctggaccgagctacagtatgccagttcat
gctgcagtacagatgacagcggaacagcttaaaacagaatttgacaaattatttgaagat
ttaaaagaagatgataaaactcatgaaatggaaccagctgaggctgttgaaacaccattg
cttcctcatcagaaacaagctctgtcttggatgatctctcgggagaacagtcaagaactc
cctccattctgggagcagcggaatgacttatactacaacacaataacaaatttttctgag
aaagaccgaccagaaaatgtccatggaggaattttagctgatgatatgggtttgggtaaa
actcttacagccattgcagtaattcttaccaacttccacgatggtaaacctcttcctgta
gagagaattaaaaagaatcaactgaagaaggaatgtaaggaatgtaatgttaaagatgag
tctgagaaacttggaggaaacagttccactgaaaaggcagatgggcaaggcaaagaaaga
tctagatgtagtgaagaacccagtatttcacatatcaaggagaagaaaaagtgttccatg
tcagaattgtctagctctcgccccaaaagaagaaaaattactgtccagtacgttgaaagc
agtgattcagaggaaattgaagcaagtgaattgcctcagaaaaccaaaggcaaactgaaa
aatatacagtcagagactaaaagccgggcaaaagcaggatcttccaaggtcaaagaagat
gcagcctttgcatgtgcactgacttcacctagccctgcaacaaagaagaaaaccttgaaa
aggggagcatcttcagtggagggttcaaagaaaactgatgttgaagagagaccaagaaca
acactgattatctgcccactttctgtgttgagcaactggattgaccaatttgggcaacat
ataaaatcagaggtgcacttgaatttttatgtttattatggtcctgatcgtattagagac
ccagccttgctttcaaaacaggatattgttttgactacctacaacattttaactcatgac
tatggaactaaaggggacagtccattacatagcataagatggctaagagtgatcctggat
gaaggccatgccattcgaaatccaaatgctcagcagacaaaagctgcactcgatttagaa
gcagaaaggagatgggtattaacaggaactcctatccagaattctttgaaggacttgtgg
tctcttctgtcctttttaaaacttaaaccatttattgatagagaatggtggcatagaaca
atacagcgtcccgtcactatgggagatgaaggaggacttagacgtttacagtccctaatt
aaaaatatcacacttagaagaacaaagacaagcaaaattaaaggaaagcctgttttggag
ttaccagaacgtaaagtatttattcagcacattacactttcagatgaagagagaaagatt
tatcaatctgtgaaaaatgaaggcaaagctactattggaaggtactttaatgaaggaact
gtccttgcacactacgcagatgtcctgggtcttctgcttagactgcggcagatttgttgt
catactcaccttcttacaaatgcagtgtcttccagtggctcctcagccttttctctagga
aatgatacacctgaagaattgagaaagaagttaataaggaagatgaagctaattctgagc
tcaggttcagatgaagaatgtgcaatttgcttggattctttaacagttcctgtgataaca
cattgtgcacatgtgttttgtaaaccttgtatttgtcaggtcattcagaatgagcagcca
catgctaaatgccctttatgcagaaatgatatacatggagacaatttattagaatgtcct
ccagaagaattggcatgtgacagtgagaaaaagtccaatatggaatggacatccagttca
aagattaatgctctaatgcatgctttgattgacttaagaaagaagaatccaaacataaaa
agtttagttgtttctcagtttacaacgttcctgtctctaatagaaacaccacttaaagcc
tctggatttgtgttcactcgtctggatggttccatggcccagaagaaaagagctgagtct
attcagtgtttccagaacactgaagcaggctctccaactatcatgctgctgtccttaaaa
gcagggggagttggtttgaatctttgtgcagcttctcgggtatttttaatggatccagcc
tggaatcctgctgctgaggaccagtgctttgacaggtgccacagacttggccagaagcaa
gaagttatcatcactaaattcattgtgaaggattctgttgaagaaaatatgctgaaaata
caaaacacaaaaagagaacttgcagctggagcttttggaacaaaaaaatcgaatgctaat
gaaatgaaacaagctaaaattaatgaaatccgaactctaattgatttataa

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