KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963637
Entry
101963637         CDS       T10664                                 
Symbol
Per1
Name
(RefSeq) period circadian protein homolog 1 isoform X1
  KO
K21944  period circadian protein 1
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04710  Circadian rhythm
iti04713  Circadian entrainment
Brite
KEGG Orthology (KO) [BR:iti00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    101963637 (Per1)
   04713 Circadian entrainment
    101963637 (Per1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:iti03400]
    101963637 (Per1)
DNA repair and recombination proteins [BR:iti03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    101963637 (Per1)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 101963637
NCBI-ProteinID: XP_005332898
UniProt: I3M5Y1
LinkDB
Position
Unknown
AA seq 1294 aa
MSDPLEEADGGRDPRPGESFRPGGVPSPGPPQHRPCPGPNLADDTDANSNGSSGNESNGH
ESRGASQRSSHSSSSGNGKDSALLETTESSKSTNSQSPSPPSSSIAYSLLSASSEQDNPS
TSGCSSEQSARARTQKELMTALRELKLRLPPERRGKGRSGTLATLQYALACVKQVQANQE
YYQQWSLEEGEPCAMDISTYTLEELEHITSEYTLRNQDTFSVAVSFLTGRIVYISEQAGV
LLRCKRDVFRGARFSELLAPQDVGVFYGSTAPSRLPTWGTGASAGSGVKDFTQEKSVFCR
IRGGPDRDPGPRYQPFRLTPYVTKIRVSDGAPAQPCCLLIAERIHSGYEAPRIPPDKRIF
TTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPF
DHSPIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTGPLNEDVFTPPAPSPTL
SLDSDIQELSEQIHRLLLQPVHSSSPTGLCGVGPLMSPGPLHSPGSSSDSNGGDAEGPGP
PVPVTFQQICKDVHLVKHQGQQLFIESRARPLPQPRLPATGTFKTKALPCQTPDPELEAA
PALTQAPPPLVPEEAERKEASSCSYQQINCLDSILRYLESCNIPSTTKRKCASSSSYTAS
SASDDDKQRTVPIGAKKDPSSAVLSGEGAAPRKEPVVGSTLSPLALANKAESVVSVTSQC
SFSSTIVHVGDKKPPESDIIMMEELPGLAPGPTPSPAPSPTVAPDPAPDAYRPVGLTKAV
LSLHTQKEEQAFLNRFRDLGRLRGLDNSSTAPSAPGERGCHHGPAPPSRRHHCRSKAKRS
RHHQTPRAEAPCYVSHPSPVPPSGPWPPPPATTPFPAVVQPYPLPVFSPRESPQPIPPAP
TSVPSATFPTPLVTPMVALVLPNYLFPTTSSYPFGVPQTPAEGPPTPASHSPSPSLPPLP
PSPPRRPDSPLFNSRCSSPLQLNLLQLEEPPRPEGGTVAGGPGSSAGLPPPSEEAAEPEA
RLVEVTESSNQDALSGSSDLLELLLQEDSRSGTGSAASGSLGSGLGSGSGSGSHEGGSTS
ASITRSSQSSHTSKYFGSIDSSEAEAGAAQARAEPGDQVIKYVLQDPIWLLMANADQRVM
MTYQVPSRDMASVLKQDRERLRAMQKQQPRFSEDQRRELGAVHSWVRKGQLPRALDVMAC
VDCGSSSQDPGHSDDPLFSELDGLGLEPMEEGGGEGGSSGGGGDGDGGIGEGGEEAQAQV
EAKVSSSQDSAMEEEEQGGSSSSPALCAAENGTS
NT seq 3885 nt   +upstreamnt  +downstreamnt
atgagtgatcccctagaagaggctgatgggggaagggaccccaggcccggcgaatccttt
cgtcctgggggagtcccatcccctggacccccacagcaccggccttgcccaggccccaat
ctggctgatgacactgatgccaatagcaatggctcaagtggcaatgagtccaatgggcat
gaatccaggggtgcatctcaacggagttcacatagctcctcctctggcaatggcaaggac
tcggcccttctggagaccactgagagcagcaagagcacaaactctcagagcccatcccca
cccagcagttccattgcctacagcctcctgagtgccagctcagagcaggacaacccatct
accagtggctgcagcagtgaacagtcagctcgggcaaggactcagaaggaactcatgact
gcacttcgggagctcaagcttcgactaccaccagagcgtcggggcaaaggccgttctggg
accctggccacactacagtatgcactggcttgtgtcaagcaggtgcaggccaaccaggaa
tactaccagcagtggagtctggaggagggtgagccatgtgccatggacatatccacttac
accctggaggagctggagcacatcacatctgagtatacacttcgcaaccaggataccttc
tcggtggctgtctccttcctgacaggccgaattgtatacatttcggagcaggcaggagtt
ctgctgcgttgcaagcgggatgtatttcggggtgcccgcttctcagagctcctggctccc
caggatgtgggtgtcttctatggctccacggccccatctcgtctacccacttggggcact
ggggcctctgcaggttcaggcgtcaaggattttacccaggagaagtctgttttctgccgt
atcagaggaggtcctgacagagatccagggcctcggtatcaaccattccgcctaactcca
tatgtgaccaagatccgggtctcagatggggcccctgcgcagccgtgctgcttgctcatt
gcagaacgcatccactcgggttatgaagctccccgtatcccccctgacaagaggattttc
accacacgtcacacaccaagctgcctcttccaggacgtggatgaaagggctgctccgctg
ctgggctacctaccccaggacctcctgggggccccagtgcttttgttcctgcatcccgag
gacagaccactcatgctggccatccataagaagatcctacagctggcaggccaacccttt
gaccactcccctattcgcttctgtgcccgtaatggggagtacgtcaccatggacaccagc
tgggctggcttcgtgcacccctggagccgtaaggtggcctttgtgttgggccgccacaaa
gtacgcacgggacccctgaatgaggatgtgttcactcctccggctcccagtccaactctg
tccctggactctgatatccaggagctctcagagcagatccatcggctactgttgcagcct
gtgcacagctccagccccacaggactctgtggagttggccccttgatgtccccaggccct
ctccacagccctggctcttccagtgatagcaatggcggtgatgctgaggggcctggacca
cctgttccagtgactttccagcagatctgtaaggatgtgcatctggtgaagcaccagggg
cagcagcttttcattgagtcccgggcccggcctctaccccagcctcgcctccctgctaca
ggcacattcaagaccaaggcccttccttgccagaccccagacccagagctggaggcagcc
cctgctctgacccaggctccaccacccttggtccctgaggaggctgagaggaaagaagcc
tccagctgttcctatcagcagatcaactgcctagacagcatcctcaggtacctggaaagc
tgcaacatccccagcacaaccaagcgtaaatgcgcttcctcctcctcctatactgcctcc
tcagcctctgatgatgacaagcagaggacagtccccataggggccaagaaagatccatca
tcagcagtgctgtctggggagggggccgctccacggaaggagccagtggtgggaagcacc
ttgagcccgctcgccctggccaataaggcggagagcgtggtgtccgtgaccagtcagtgt
agcttcagctccaccatcgtccatgtgggagacaagaagcccccggagtcggacatcatc
atgatggaggaactgcctggcctagctccaggcccaacccccagcccggcccccagcccc
acagtagcccctgacccagccccagatgcctaccgcccagtgggcctgaccaaggccgtg
ctgtccctgcacacacagaaggaagagcaagccttcctcaaccgcttccgagaccttggc
aggctgcgtggacttgacaactcttccacggccccctcggcccctggcgagcgaggctgc
caccatggcccagcaccccccagccgccgacaccactgccgatccaaagccaagcgctca
cgccaccaccagaccccacgggccgaagccccctgctatgtctcccacccctcacctgtg
cccccctctggcccctggccccctcctccagccaccactcccttcccagcagtggtccag
ccttacccactcccagtgttctccccacgggaaagtccccagcctattcctcctgctccc
acatctgtgccctctgccactttccctacccccttagtaactccaatggtggccttggtg
ctccctaactatctgttcccgactacatctagctatccctttggggtacctcagacacca
gctgaggggcctcctacccctgcctcccactcaccctccccatccctgcccccacttcct
cccagtcccccacgccgcccagactccccactgttcaactcaagatgcagttccccactc
cagctcaatctgctgcaacttgaggagcccccccgtcctgaggggggcactgttgcaggg
ggtcctgggagcagtgctgggctcccacctcctagtgaggaggccgctgagcctgaagcc
agattggtggaggtaactgaatcctccaatcaggatgcactctctggctccagtgatctg
ttggaactgctactgcaagaggactcgcgttctggtacaggctctgcagcctcaggctcc
cttggctctggcttgggctctggatcaggttcaggctcccatgagggtggcagcacctca
gccagcatcacccgcagcagtcagagcagccacacaagcaagtacttcggcagcattgac
tcttcggaagctgaagctggagctgctcaggccagggctgagcctggggaccaggtcatt
aagtatgtgctccaggatcccatctggctgcttatggccaatgctgaccaacgtgttatg
atgacctaccaggtgccctccagggacatggcatctgtgctaaagcaggaccgagagcgg
ctccgagccatgcagaagcagcagcctcggttctcagaggaccagcggcgggaactgggt
gctgtgcactcctgggtccgcaagggacagttgcctcgggcccttgatgtgatggcctgt
gtggactgtggtagcagctcccaagaccctggccactctgatgacccacttttctcggag
ctggatggactggggctggagcccatggaggagggtggaggcgagggtggcagcagtggt
ggtggtggtgatggtgatggtggcattggtgagggtggcgaggaggcccaggcccaagtt
gaggccaaggtctcaagctctcaggactctgccatggaggaggaggaacaaggtgggagc
tcgtccagtccagccttatgtgcagcagaaaatggcaccagctaa

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