Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963645
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Entry
101963645 CDS
T10664
Symbol
Cpt1c
Name
(RefSeq) carnitine O-palmitoyltransferase 1, brain isoform isoform X2
KO
K19524
carnitine O-palmitoyltransferase 1, brain isoform [EC:
2.3.1.21
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00071
Fatty acid degradation
iti01212
Fatty acid metabolism
iti03320
PPAR signaling pathway
iti04148
Efferocytosis
iti04152
AMPK signaling pathway
iti04714
Thermogenesis
iti04920
Adipocytokine signaling pathway
iti04922
Glucagon signaling pathway
iti04936
Alcoholic liver disease
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
101963645 (Cpt1c)
09130 Environmental Information Processing
09132 Signal transduction
04152 AMPK signaling pathway
101963645 (Cpt1c)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101963645 (Cpt1c)
09150 Organismal Systems
09152 Endocrine system
04922 Glucagon signaling pathway
101963645 (Cpt1c)
04920 Adipocytokine signaling pathway
101963645 (Cpt1c)
03320 PPAR signaling pathway
101963645 (Cpt1c)
09159 Environmental adaptation
04714 Thermogenesis
101963645 (Cpt1c)
09160 Human Diseases
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
101963645 (Cpt1c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
iti03029
]
101963645 (Cpt1c)
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
101963645 (Cpt1c)
Mitochondrial biogenesis [BR:
iti03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
101963645 (Cpt1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
PaaA2
Motif
Other DBs
NCBI-GeneID:
101963645
NCBI-ProteinID:
XP_005336750
UniProt:
I3MPG8
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MAEAHQAVNFMPSLTSDRGEVELSGPVWQEIYLSGLRSWKRHLLRFWNDFLTGVFPATPL
SWLFLFSAIQLAWFLQLDPSLGLMEKIKELLPDWGGQHHRLRGVLAAALFASCLWGALIF
TLHVALRLLLSYHGWLLEPHEAMSSTTKTWLALVRIFSGRHPVLFSYQRSLPRQPVPSVQ
DTVRKYLESVRPVLSDEDFDWTTGLAQEFLKLQASLLQWYLWLKSWWASNYVSDWWEEFV
YLRSRNSLMVNSNYYMMDFLYVTPTPLQAARAGNAVHALLLYRRRLNRQEIPPNLLMGMR
PLCSAQYEKIFNTTRVPGVQKDYIRHLQDSRHVAVFHRGRFFRVGTHSPNGLLSPRALEQ
QFQRILDDPSPACPHEEHLAALTAAPRGMWAQVRKSLKTQAAQALEAVEGAAFFVSLVAE
PAGLTREDPAASLDAYAHALLVGRGHDRWFDKSFTLIVFSNGKLGLSVEHSWADCPISGH
MWEFTLATECFQLGYSADGHCKGRPDPTLPQPQRLQWDLPEQVHLSISLALRGAETLSSN
VDCHVFPFSHFGKSFIKRCHLSPDSFIQMALQLAHFRDRGQFCLTYESAMTRLFLEGRTE
TVRSCSREACDFVRAMEDQEKTDPQCLALFRVAVEKHQALLKAAMCGQGVDRHLFALYIV
SRFLHVQSPFLAQVHSEQWPLSTSQIPVQQTQLFDVHNYPDYVSSGGGFGPADDHGYGVS
YIFMGDDMITFHISSKKSSTKTDSHRLGQHIEDALLDVASLFQAGQRLKRRRRGPGDEDS
GHRRGFISTKTVDSKAPRTSTPADPFQ
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcccaccaggctgtgaatttcatgccctcgctgacttcagacaggggtgaa
gtggagctcagtggccctgtgtggcaggagatctacctctctggcctgcgctcttggaag
aggcatctcttgagattctggaatgactttctcacgggtgtgttccctgccacccccctc
agctggctcttcctcttcagtgccatccagcttgcctggttcctgcagcttgatccttct
ctaggattgatggagaagattaaagaactgctgccagactggggtggacagcaccatagg
ctccggggtgttctggcagctgcgctgtttgcctcgtgtctgtggggagccctgatcttc
acacttcacgtggccctgaggctgcttctgtcctaccacggctggcttcttgaaccccac
gaagccatgtcctcaaccaccaagacctggctggccctggtccgcatattctctggccgc
cacccggtgctcttcagttatcagcgctcgctgccgcgccagccggtgccctcggtgcag
gacaccgtgcgcaagtatctggagtctgtccgacccgtcctctccgacgaggacttcgac
tggacgacggggctggcccaggagttcctgaagctgcaggcgtcgctgctgcagtggtac
ctgtggctcaagtcctggtgggcgtccaattacgtcagtgactggtgggaagaatttgtg
tacctgcgctcccgcaactcactgatggtgaacagcaactattacatgatggacttcctg
tatgtcacacccacaccgctgcaggcggctcgcgcagggaatgcggtccatgccctactt
ctgtaccgacgccgtctgaaccgccaggagattcccccgaatttgctgatgggaatgcgc
cccttgtgctctgcccagtatgagaagatattcaacactacgcgcgtgccaggggtccaa
aaagactacatccgccacctccaggacagccggcatgtggcggtcttccaccgggggcga
ttcttccgtgtggggacccattccccaaatggcctgctctccccgagggccctggagcag
cagttccagcgaatcctagatgacccctcgcccgcctgtccccacgaggagcacctggcg
gccctgacggctgctcccaggggtatgtgggcccaggtgcggaagtccctgaagacccag
gccgcccaggccctggaggcggtggagggggccgctttctttgtgtctctggtggcggag
ccagccggcctcaccagggaggaccccgccgcttctctggatgcctatgcccacgccctg
ctggtcggcaggggccacgaccgctggtttgacaagtccttcaccttgattgtcttctcc
aacgggaagctgggcctcagtgtggagcactcgtgggctgactgccccatctcaggacac
atgtgggagttcaccctggctacagaatgctttcagctgggctactcagcagatggccac
tgcaaggggcgtcctgaccccacgctgccccagccccagcggctgcagtgggaccttcca
gaacaggtccacctgtccatctctcttgccctgcggggagccgagacgttgtccagcaac
gtcgactgccacgtcttccccttctcccactttggcaagagcttcatcaaacgctgccat
ctgtctccagacagcttcatccagatggccctgcagctggcccacttccgggacaggggt
cagttctgcctgacctacgagtcggccatgacgcgcttgttcctggaaggcaggacggag
acggtgcggtcttgctctcgggaggcctgcgacttcgtgagggccatggaggaccaggag
aagacagacccacagtgcctcgccctgttccgagtggcggtggagaagcaccaggctcta
ctgaaggcagcgatgtgcgggcagggggtcgaccgccacctttttgcgctctacatcgtg
tcccgattcctccacgtgcagtcacccttcctggcccaggttcactcggagcagtggccg
ctgtccaccagccagatccccgtgcagcagacgcagctgttcgacgtccacaactaccca
gattacgtttcctcgggtggcggattcggccctgcggatgaccatgggtacggggtttct
tacatcttcatgggggatgacatgatcaccttccacatctccagcaaaaaatcaagcaca
aaaacggactcccaccggctggggcagcacatcgaggatgctctgttggacgtggcctcc
ttgttccaggcagggcagcgtcttaagcgccggcgcagagggccaggggatgaggactcg
ggacacagacgtggatttatctccactaagactgtggattccaaggcacccaggacctcc
acacccgctgaccccttccagtag
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