Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963735
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Entry
101963735 CDS
T10664
Symbol
Sec31b
Name
(RefSeq) protein transport protein Sec31B isoform X3
KO
K14005
protein transport protein SEC31
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101963735 (Sec31b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101963735 (Sec31b)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
iti02044
]
101963735 (Sec31b)
Membrane trafficking [BR:
iti04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
101963735 (Sec31b)
Secretion system [BR:
iti02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
101963735 (Sec31b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EIPR1
Beta-prop_EML
WD40_RFWD3
EIF3I
TPR_Sec16
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Type_III_YscX
MIOS_WD40
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
101963735
NCBI-ProteinID:
XP_013217551
LinkDB
All DBs
Position
Unknown
AA seq
1169 aa
AA seq
DB search
MKLKELERPAVQVWSPASLYPVYLATGTSAQQLDASFSTNGTLEIFEVDFRDPSMDLKQK
GVLSALSRFHKLIWGSFDNGLLESSGVIAGGGDNGMLTLYNVTHILSSGKEPVIAQRQKH
TGAVRALDFNPFQGNLLASGASNSEIFIWDLNNLSVPMTPGCKSQQPLEDIKALSWNRQV
QHILSSAHPSGKAVVWDLRKNEPIIKVSDHSSRMHCSGLAWHPDIATQLVLCSEDDRLPV
IQLWDLRFASSPLKVLESHSRGILSVSWSQADAELLLSSSKDNQILCWNLGNTEVVYKLP
TQSSWCLDVQWCPRNPPVFSAASFDGWISLYSVMGRSWEVQHMVQADKISSSFSKGQPLP
PLQVPEHVAQASLIPPLKKPPKWIRRPSGVSFAFGGKLVTFGLSSTPAQELPQPCSRLVF
ISQVITESEFLMRSLELQEALGSGNLMKYCQNKSQQALLPCEKMLWQFLKVTLEQDSRIK
FLKLLGYNKDELLEKVTTWLKRDLGPAESPQPKKDNFNSNRQQVFCSQASKHTTEDASVS
SAFFDELVPQNMTPWEIPITEDTDGLLSQALLLGELSSAVELCLKEERFADAIILAQAGG
TDLLKRTQERYLAKRQTKISSLLSCVVQKNWKDLVCACSLRNWREALALLLTYSGPEKFP
ELCDMLGTRMEQEGGRALTSEATLCYVCSGNVERLVECWAKGHQASSPMALQDLIEKVMV
LNRSLEPQQAPNGTSPGSTTTYRITQYANLLAAQGSLATAMSFLPNDCAQPPVQQLRDRL
FHAQGSAVLGQQSPSFPFPRVVVEATTPFKETSSYRLGSQPSHQVPSPSSRPTDTFQPSL
VMPLTPSHPIPCQSFRTKTISDYRIPEPQAIQPLPLGPGVRPALSQLQLLGGQRAPPSNP
VRFPGTWPVSGLPSPMASPDIMVPGSTSLSETPRLLPLPSVRPPGPSPLSSQLLAPPAYS
PVTYPPGGPGAPCSSSLSSASILTPHQGPQGNLQRKKLPEVFMPLAPITAPVRSFIPEPQ
RVLPSQTPISSVNHAPPGAPGELSLQQRQQPPSKMIERKALPPEHQSLKTSFEALLQRCS
LSATDLKTKRKLDEAAQRLEGLYEKLCEGTLSPHVLAGLHEVARCVDAGSFEQSLAVHAQ
VVGYSSFSEVSSFMPILKAVLTIAHKLQG
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaggaacttgagcggccagctgtccaagtgtggagcccagccagtttgtat
cctgtgtatctggccacaggaacttctgcccaacagctagatgcctcctttagcacaaat
ggcacattggaaatctttgaggttgatttcagggatccttctatggacttgaaacaaaaa
ggagtcctttctgccttgagcaggtttcacaagctgatctggggaagctttgacaatggg
cttctggaaagctccggggttattgcaggtggtggagacaatggcatgcttactctgtac
aatgtgacccacatcctatcttctggaaaggagcctgtgattgcccagagacagaagcac
acaggagctgtcagagcccttgactttaatcctttccagggcaacctgctggcctcaggg
gcaagtaattctgaaatattcatttgggatttgaataacctgagtgttccaatgacccca
ggatgtaagtcacagcagcccttagaagacatcaaggcactctcttggaaccggcaagtc
cagcacattctgtcttctgctcatcccagtggcaaggcagttgtatgggatctcaggaag
aatgaacctatcatcaaagtcagtgatcatagcagcaggatgcattgctcgggcctggcc
tggcacccagacatagctacccagttagtgctgtgctcagaagatgaccgtctcccagtg
attcagttgtgggacttacgttttgcctcctcacccctgaaggtgctagagagccacagc
aggggaattttgtcagtgtcatggagccaagctgatgctgagctgctgctcagtagttcc
aaggacaaccagatcttgtgctggaaccttgggaacactgaggtggtatataagctaccc
acacagagcagctggtgcttagatgttcaatggtgccctcggaaccctccagtgttctct
gctgcctcctttgatggctggatcagtttgtactctgtcatgggtaggagctgggaagtc
caacacatggtacaggctgacaagatctcctcttccttcagcaaaggccagcctcttcca
ccattgcaggtaccagagcatgtggcccaagcatcattgatacctcccttgaaaaagccc
ccaaaatggattagaaggccatcaggtgtttcatttgcttttggggggaagctggtcact
tttggcctttccagtacccctgcccaggagttgccacagccttgttcccgccttgtcttc
atcagtcaagtcattacagaatctgaattcctgatgaggtcacttgagcttcaggaggcc
ttgggatcaggaaatctcatgaaatattgtcagaacaagagccagcaggctttgctgcca
tgtgaaaagatgctctggcagttcctgaaggtgactttagagcaagactcaagaataaaa
ttcctaaagcttttaggatacaataaagatgagcttctagagaaggtgaccacatggttg
aagagggacttggggccagcagagagccctcagcccaagaaagataactttaacagtaac
agacaacaagtcttctgcagccaggcctccaaacatactacagaggatgcctctgtatcc
tcagccttctttgatgagctggttcctcagaatatgaccccatgggagatccccatcaca
gaagacactgatggactcctgagccaggccctgctgcttggggaactgagttctgctgtg
gagctgtgtctgaaggaagagcgttttgctgatgctatcatcttggctcaggctgggggc
acagatctgttgaaacggacacaggagcgctatttggccaagaggcaaaccaaaatttcc
tcgcttctatcctgtgttgtgcagaagaactggaaggatctggtgtgtgcctgtagcctg
aggaactggagagaggcactggccttattgttaacatactcagggccagagaaattccct
gagctctgtgacatgctggggactcgcatggagcaagagggtggcagggcattaacctct
gaagctacactctgttatgtgtgctcagggaatgtggagcggctagtagagtgctgggca
aaaggccaccaggcctcatcccccatggctctgcaggacctgatagagaaagtaatggtc
cttaacaggagcttggaacctcagcaggctcctaatgggacaagcccaggctctactaca
acctacaggatcacccagtatgccaatctcctggcagctcagggcagccttgccactgcc
atgagctttttacccaatgattgtgctcagccaccagttcagcagctaagagatcggctt
tttcatgcccaaggttctgctgtcctgggtcaacagtccccctcttttccctttccccgg
gttgttgtggaagctaccacccctttcaaagagacatcatcttacagattgggatcccag
ccttctcaccaggttccaagtccatcttcaaggcctacggacacatttcagccatcacta
gtaatgcccttgacaccctcccatcctatcccctgtcagagcttcaggacaaagactata
agtgactacaggatacctgaaccccaggcaatccagcctttgcctttgggccctggggtc
aggcctgctttatctcagctgcaactattaggaggacaaagggctccaccctcaaaccct
gtgagattccctggaacatggcctgtttctggtcttccttcacccatggcatccccagac
atcatggtgcctggctctacttctctgtctgagactcctagactactccctctgccttct
gtgagaccaccaggtcccagccctctgagctcccagctcctggcccctcctgcctactct
cctgtaacttaccctcccggagggccaggtgctccatgctctagctctctctcaagtgct
agcatcttgacccctcatcaaggacctcaaggaaatctccagaggaaaaagctcccggag
gtatttatgcctctagcaccaattactgctccagttaggagctttatccctgagccacaa
cgggtccttccatcacagacccccatttccagtgtgaatcatgctccccctggagctcca
ggagaactcagcctacagcaacgtcagcaaccaccttctaagatgatagaaagaaaggca
ctgcccccagagcatcagtccttgaagaccagctttgaggcacttctccagcgctgctcc
ctttctgcaactgacttaaagacaaaaaggaagctggatgaggctgcccaacgtctagaa
ggtctatatgagaaactctgtgaggggacgctctcacctcatgtcctggctgggctacat
gaagtcgcccgatgtgtggatgcaggaagctttgagcagagccttgcagtgcacgcccag
gtggtgggctatagcagcttcagcgaagtgtccagcttcatgcctatcctgaaggctgtc
ctcaccattgcacacaagctgcagggttaa
DBGET
integrated database retrieval system
