Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963824
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Entry
101963824 CDS
T10664
Symbol
Zeb1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti05202
Transcriptional misregulation in cancer
iti05206
MicroRNAs in cancer
iti05215
Prostate cancer
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
101963824 (Zeb1)
05206 MicroRNAs in cancer
101963824 (Zeb1)
09162 Cancer: specific types
05215 Prostate cancer
101963824 (Zeb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iti03000
]
101963824 (Zeb1)
Transcription factors [BR:
iti03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
101963824 (Zeb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
zf-C2H2_6
Zf-C2H2_ZNF451_C
Zn_SUZ12
zf-C2HE
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
101963824
NCBI-ProteinID:
XP_005330864
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNTVVETNSDSDDEDKLHIVEEESVTDAADCEGGVPED
DLPTDQTVLPGSSEREGSAKSCWEDDAGKEGQEILGPEAQADDAGCTVKDDDCDSDAENE
QNHDPNVEEFLQQQDTAVIYPEAPEEDQRQGTPEASGHDENGTPDAFSQLLTCPYCDRGY
KRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLERHMTSHKSGRDQRHVTQSGGNRK
FKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCISLMPVN
GRPRTGLKTSQCSSPSLSASPGSPTRPQIRQKIENKPLQEQLSVNQIKTEPVDYEFKPIV
VASGINCSTPLQNGVFSGGGPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVA
VDGNVIRQVLENNQANLASKEQETINASSIQQGGHSVISAISLPLVDQDGTTKIIINYSL
EQPSQLQVVPQNLKKENPVPTNNCKSEKLPEDLTVKSEKDKSFEGGVNDSTCLLCDDCPG
DLNALPELKHYDLKQPAQPPLPAPEAEKPESSVSSGTGDGSLSPSQPPLKNLLSLLKAYY
ALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQAGQISVQCSEPSSPEPGKVNILAKNDD
LSQPTNENESQDSTSLHSPPKMTNSPVLTVGSTVNGSRSSTPSPSPLNLSSARNTQGYSY
AAEGAQEEPQVEPLDLSLPKQQGELLERSTITSVYQNSVYSVQEEPLNLSCAKKEPQKDN
CVTDSEPVVNVIPPSANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIPQV
AYTYSATVSPAVQEPALKVVQPSGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRKTEN
GMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKPYQ
CDKCGKRFSHSGSYSQHMNHRYSYCKREAEERDGAEQEEAGPEVLTNEHVGAQASPSQVD
SDERESLTREEDEDSEKEEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEAEEEEEEEA
ENEREEAKTEGPVKDDGAVSQASSLEQKVSENSEQVSEEKTNEA
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgcggcgcaataacgtt
acaaattataatactgtggtagaaacaaattcagattcagatgatgaggacaaactccat
attgtggaagaagaaagtgttacagatgcagccgattgtgaaggaggtgtgccagaagat
gacctgccaacagaccagacagtattaccagggagcagtgaaagagaagggagtgctaag
agctgctgggaagatgatgcaggaaaggaagggcaagaaatcctggggcctgaagctcag
gcagatgatgcaggatgtacagtaaaagatgatgactgcgactcagatgcagaaaatgag
caaaaccatgatcctaatgttgaagagttcctgcaacaacaagacactgctgtcatttat
cctgaggcacctgaagaggaccagaggcagggcacaccagaagccagtggtcatgatgaa
aatggaacaccagatgcattttcccaattactcacctgcccgtattgtgatagaggctat
aaacgctttacctctctgaaagaacacattaagtatcgccatgagaagaatgaagataat
tttagttgctccctgtgcagttatacctttgcatacagaacccaacttgaacgtcacatg
acatcacataagtcaggaagagatcaaagacatgtgacgcagtctgggggtaatcgtaaa
ttcaagtgcactgaatgtggaaaagcttttaaatacaaacaccacctaaaagagcactta
agaattcacagtggagagaagccatatgaatgcccaaactgcaagaaacgtttttcccat
tctggttcctatagctctcatataagcagtaagaaatgtatcagcttgatgcctgtgaat
gggcgaccaagaacaggtctcaagacatctcagtgttcctcaccatctctttcggcatca
ccaggcagtcccacacgaccacagatacggcaaaaaatagagaataaaccccttcaagaa
caactttcagtaaaccaaattaaaactgaacctgtggattatgagttcaaacccatagtg
gttgcttcaggaatcaactgttcaacccctttacaaaatggggtttttagtggtggtggc
ccattacaggcaaccagttctcctcagggtgtggtgcaagctgttgttctgccaacagtt
ggtttggtatctcccataagtatcaatttaagtgatattcagaatgtacttaaagtggca
gtagatggtaatgtaataaggcaagttttggagaataatcaagccaatcttgcatccaaa
gaacaagaaacaatcaatgcttcatctatacaacaaggtggccattctgttatttcagcc
atcagtcttcctttggttgatcaagatggaacaaccaaaattatcatcaactacagtctt
gagcagcctagccaacttcaagttgttcctcaaaatttaaaaaaagaaaatccagtcccc
acaaacaattgcaaaagcgaaaagttgccagaagatcttactgttaaatctgagaaagat
aaaagctttgaaggaggagtgaatgatagcacttgtcttctgtgtgatgattgtccaggt
gatcttaatgcacttccagaattaaagcactatgacctaaagcagccagctcagcctcca
ctccctgccccagaagctgagaagcctgaatcctctgtttcatcaggtaccggagatggc
agtttgtctcctagtcagccacctttgaagaacctcctgtctctcctaaaagcctattat
gctttgaatgcacaaccaagtgcagaagagctctcaaaaattgctgattctgtaaatcta
ccactggatgtagtaaaaaagtggtttgaaaaaatgcaagctggacagatttcagtgcag
tgttctgaaccatcttctcctgaaccaggcaaagtaaatatccttgcaaagaatgatgat
ctgtctcaacccacaaatgaaaatgaatcccaggacagcacaagtctacatagtcctccg
aagatgactaattctccagttttaacagtaggatcaactgtcaatggttccagaagtagt
acaccatccccatcacctctaaacctttcctcagccagaaatacacagggttactcatac
gcagcagagggcgcacaagaagagccacaagtagaacctcttgatctttcactaccaaag
caacagggagaattattggaaaggtcaactatcactagtgtttaccagaacagtgtttat
tctgtccaagaagaacccttgaacttgtcttgtgcaaaaaaggagccacaaaaggacaat
tgtgttacagactcagaaccagttgtaaatgtaatcccaccaagtgccaaccccataaat
attgctatacctacagtcactgcccaattacccacaatcgtggccattgctgaccagaac
agtgttccatgcttacgagcactagctgccaataagcaaactattctgattccccaggtg
gcttatacatactcagctacagtcagccctgcagtccaggaaccagccctgaaagtggtc
cagccaagtggaaatcaggatgaaaggcaagacactagctcagaaggagtatccaatgtg
gaggatcagaatgactctgattctacaccacccaaaaagaaaatgcggaagacagaaaat
ggaatgtatgcctgtgacttatgtgataagatatttcagaagagtagctcattgttgaga
cataaatatgaacacacaggtaaaagacctcatgagtgtggaatctgtaaaaaggcattt
aaacacaaacatcatttgattgaacacatgcgattgcattctggagaaaagccctatcaa
tgtgacaagtgtggaaagcgcttctcacactcgggatcttattctcaacacatgaatcac
cgctattcatattgcaagagagaagcagaagaacgagatggcgcagagcaggaagaggca
gggccagaggtcctgacgaatgagcacgttggcgctcaggcatctccctcacaggtcgac
tcagatgagagagagagtttgacaagagaagaggatgaagacagtgaaaaagaggaagag
gaggaggaggataaagagatggaagaattacaggaggaaaaggaatgtgaaaaaccccag
ggagatgaggaagaggaggaggaggaagaagaggcagaagaagaagaggaagaagaagca
gagaatgagagagaggaagcaaaaactgaaggtccagtgaaggatgatggagctgtgagt
caagcaagcagcttagaacagaaagtcagcgagaacagcgagcaagtatctgaagaaaaa
acaaatgaagcctaa
DBGET
integrated database retrieval system
