Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963851
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Entry
101963851 CDS
T10664
Symbol
Pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1 isoform X1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iti03032
]
101963851 (Pif1)
03029 Mitochondrial biogenesis [BR:
iti03029
]
101963851 (Pif1)
Enzymes [BR:
iti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101963851 (Pif1)
DNA replication proteins [BR:
iti03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
101963851 (Pif1)
Mitochondrial biogenesis [BR:
iti03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
101963851 (Pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
Herpes_Helicase
AAA_22
UvrD_C_2
AAA_16
ABC_tran
RsgA_GTPase
Viral_helicase1
AAA_24
Mg_chelatase
PhoH
AAA_7
T2SSE
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
101963851
NCBI-ProteinID:
XP_005316747
LinkDB
All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
MLSSTQVAAAEGDHADLRCRVAVEELSPGGQPRKRQTLRTAELSLGRNERRELMLRLQAP
GPAGQPRCFPLRAARLFTRFAAAGRSTLRLPADAVPRAGAVQLLLSDCPPDRLRRFLRTL
RLKLAADPGPGPASALAKLLSPRPRDFVTISPVQPEELRRVAATRVLDTTLAKQPMEPGT
GAKPSMEAPRWPLPVKRLSLLPTKTQLSEEQAAVLRVVLKGQSIFFTGSAGTGKSYLLKR
ILGSLPPTGTVATASTGVAACHIGGTTLHAFAGIGSGKAPLAQCVALAQRPGVRQAWLNC
QRLIIDEISMVEADLFDKLEAVARAVRQQNKPFGGIQLIICGDFLQLPPVTKGSQPPQFC
FQAKSWKRCVPVTLELTEVWRQADKTFISLLQAVRLGRCSDEVTRQLRATAAHKVGRDGI
VATRLCTHQDDVALTNEKRLQELPGEVHSFEAMDSNPELARTLDAQCPVGQLLQLKLGAQ
VMLVKNLAVSRGLVNGARGVVVGFETEGRGLPRVRFLCGVTEVIHADRWTVQATGGQLLS
RQQLPLQLAWAISIHKSQGMSLDCVEISLGRVFASGQAYVALSRARSLQGLRVLDFDPMV
VHCDPRVLHYYATLRRGRDLHLESPNDEDAASDQENMDPNL
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgctctcgagcacccaggtggcggcagcggaaggtgaccacgcggacctgcggtgccgt
gtggcggtggaggagctgagcccaggagggcagccacggaaacgccagaccttacgcacc
gcggagctgagcctgggtcgaaacgagcgccgtgagttgatgctgcggctgcaggctccg
gggccagccgggcaaccgcgctgcttccccctgcgcgccgcgcgtctcttcacacggttc
gccgcagcggggcgcagtacgttgaggctcccagcagacgccgttccccgggcgggcgcc
gtgcagctgctgctctccgactgccccccggaccgcctgcggcgtttcttgcgcacactg
cgtctgaagctggctgcggacccgggtcccgggcctgcctctgccctcgcgaagctgctc
agccctcgaccccgcgacttcgtcaccatcagcccagtgcagccggaggagctgcggcgt
gtggcagcaacgcgggttctagacaccacgctggccaagcagccgatggaacccgggact
ggagccaagcccagcatggaagccccaaggtggcctctacctgtgaagaggctgagcttg
ctccccaccaagacacagctttctgaggaacaggctgcagtgctgagggttgtcctaaaa
ggccagagcattttcttcactgggagcgcagggactgggaagtcatatctgctgaagcgg
atcctgggctcactgccccccacaggcacagtggccactgctagcactggggtggcagcc
tgtcacattgggggcactaccctccatgcttttgcaggcatcggctcaggcaaggctccc
ctggcccagtgtgtggctctggcacagcggccaggcgtgcggcaggcctggctgaactgc
cagaggctgatcattgacgagatctccatggtggaggcagacttgtttgataagctggag
gctgtggccagagctgtccgccagcagaacaagccatttggagggatccagctcattatc
tgtggggacttcctgcagctgccaccagtgaccaagggctcccaaccccctcagttctgc
ttccaggccaagagctggaagaggtgtgtgccagtgaccctggagctcactgaagtgtgg
aggcaggcggacaagaccttcatctctctgttgcaggctgtgaggctaggcaggtgctct
gatgaggtgacccgccagctcagggccacagctgcccacaaggtagggcgagacggaatt
gtggccacaaggctctgcacccaccaggatgacgtggccctcaccaatgagaaacggctg
caggagctgccaggtgaggtacatagctttgaggctatggatagcaaccctgagttagcc
aggaccctggatgcccagtgtcctgttggccagcttcttcagctaaagctgggggcccag
gtgatgctggtgaagaatttagctgtgtccaggggcctggtgaacggagcccgaggtgta
gtagtcgggttcgagactgaagggagagggctgccccgagtgcgcttcctgtgtggagtc
actgaggtcatccatgctgaccgttggacagttcaggccactgggggccaactcctcagt
cgccagcagctgcccctccagctggcctgggcgatatccatccacaagagccagggcatg
tctctagattgtgtggagatctctctgggacgcgtgtttgccagcggtcaagcctatgtg
gccctttcccgggcccgcagcctacagggtctgcgtgtactagactttgaccccatggtg
gttcactgtgacccccgtgtgctgcactactatgccaccctgcggcgtggcagagacctc
catctggagtctccaaatgatgaagatgcagcctcggaccaggagaacatggacccaaac
ctctga
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