KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963851
Entry
101963851         CDS       T10664                                 
Symbol
Pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1 isoform X1
  KO
K15255  ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:iti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:iti03032]
    101963851 (Pif1)
   03029 Mitochondrial biogenesis [BR:iti03029]
    101963851 (Pif1)
Enzymes [BR:iti01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     101963851 (Pif1)
DNA replication proteins [BR:iti03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    101963851 (Pif1)
Mitochondrial biogenesis [BR:iti03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA maintenance factors
    101963851 (Pif1)
SSDB
Motif
Pfam: PIF1 Pif1_2B_dom AAA_30 AAA_19 Herpes_Helicase AAA_22 UvrD_C_2 AAA_16 ABC_tran RsgA_GTPase Viral_helicase1 AAA_24 Mg_chelatase PhoH AAA_7 T2SSE Parvo_NS1
Other DBs
NCBI-GeneID: 101963851
NCBI-ProteinID: XP_005316747
LinkDB
Position
Unknown
AA seq 641 aa
MLSSTQVAAAEGDHADLRCRVAVEELSPGGQPRKRQTLRTAELSLGRNERRELMLRLQAP
GPAGQPRCFPLRAARLFTRFAAAGRSTLRLPADAVPRAGAVQLLLSDCPPDRLRRFLRTL
RLKLAADPGPGPASALAKLLSPRPRDFVTISPVQPEELRRVAATRVLDTTLAKQPMEPGT
GAKPSMEAPRWPLPVKRLSLLPTKTQLSEEQAAVLRVVLKGQSIFFTGSAGTGKSYLLKR
ILGSLPPTGTVATASTGVAACHIGGTTLHAFAGIGSGKAPLAQCVALAQRPGVRQAWLNC
QRLIIDEISMVEADLFDKLEAVARAVRQQNKPFGGIQLIICGDFLQLPPVTKGSQPPQFC
FQAKSWKRCVPVTLELTEVWRQADKTFISLLQAVRLGRCSDEVTRQLRATAAHKVGRDGI
VATRLCTHQDDVALTNEKRLQELPGEVHSFEAMDSNPELARTLDAQCPVGQLLQLKLGAQ
VMLVKNLAVSRGLVNGARGVVVGFETEGRGLPRVRFLCGVTEVIHADRWTVQATGGQLLS
RQQLPLQLAWAISIHKSQGMSLDCVEISLGRVFASGQAYVALSRARSLQGLRVLDFDPMV
VHCDPRVLHYYATLRRGRDLHLESPNDEDAASDQENMDPNL
NT seq 1926 nt   +upstreamnt  +downstreamnt
atgctctcgagcacccaggtggcggcagcggaaggtgaccacgcggacctgcggtgccgt
gtggcggtggaggagctgagcccaggagggcagccacggaaacgccagaccttacgcacc
gcggagctgagcctgggtcgaaacgagcgccgtgagttgatgctgcggctgcaggctccg
gggccagccgggcaaccgcgctgcttccccctgcgcgccgcgcgtctcttcacacggttc
gccgcagcggggcgcagtacgttgaggctcccagcagacgccgttccccgggcgggcgcc
gtgcagctgctgctctccgactgccccccggaccgcctgcggcgtttcttgcgcacactg
cgtctgaagctggctgcggacccgggtcccgggcctgcctctgccctcgcgaagctgctc
agccctcgaccccgcgacttcgtcaccatcagcccagtgcagccggaggagctgcggcgt
gtggcagcaacgcgggttctagacaccacgctggccaagcagccgatggaacccgggact
ggagccaagcccagcatggaagccccaaggtggcctctacctgtgaagaggctgagcttg
ctccccaccaagacacagctttctgaggaacaggctgcagtgctgagggttgtcctaaaa
ggccagagcattttcttcactgggagcgcagggactgggaagtcatatctgctgaagcgg
atcctgggctcactgccccccacaggcacagtggccactgctagcactggggtggcagcc
tgtcacattgggggcactaccctccatgcttttgcaggcatcggctcaggcaaggctccc
ctggcccagtgtgtggctctggcacagcggccaggcgtgcggcaggcctggctgaactgc
cagaggctgatcattgacgagatctccatggtggaggcagacttgtttgataagctggag
gctgtggccagagctgtccgccagcagaacaagccatttggagggatccagctcattatc
tgtggggacttcctgcagctgccaccagtgaccaagggctcccaaccccctcagttctgc
ttccaggccaagagctggaagaggtgtgtgccagtgaccctggagctcactgaagtgtgg
aggcaggcggacaagaccttcatctctctgttgcaggctgtgaggctaggcaggtgctct
gatgaggtgacccgccagctcagggccacagctgcccacaaggtagggcgagacggaatt
gtggccacaaggctctgcacccaccaggatgacgtggccctcaccaatgagaaacggctg
caggagctgccaggtgaggtacatagctttgaggctatggatagcaaccctgagttagcc
aggaccctggatgcccagtgtcctgttggccagcttcttcagctaaagctgggggcccag
gtgatgctggtgaagaatttagctgtgtccaggggcctggtgaacggagcccgaggtgta
gtagtcgggttcgagactgaagggagagggctgccccgagtgcgcttcctgtgtggagtc
actgaggtcatccatgctgaccgttggacagttcaggccactgggggccaactcctcagt
cgccagcagctgcccctccagctggcctgggcgatatccatccacaagagccagggcatg
tctctagattgtgtggagatctctctgggacgcgtgtttgccagcggtcaagcctatgtg
gccctttcccgggcccgcagcctacagggtctgcgtgtactagactttgaccccatggtg
gttcactgtgacccccgtgtgctgcactactatgccaccctgcggcgtggcagagacctc
catctggagtctccaaatgatgaagatgcagcctcggaccaggagaacatggacccaaac
ctctga

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