Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101963945
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Entry
101963945 CDS
T10664
Symbol
Cars2
Name
(RefSeq) probable cysteine--tRNA ligase, mitochondrial isoform X4
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101963945 (Cars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
iti01007
]
101963945 (Cars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iti03016
]
101963945 (Cars2)
Enzymes [BR:
iti01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
101963945 (Cars2)
Amino acid related enzymes [BR:
iti01007
]
Aminoacyl-tRNA synthetase
Class I (G)
101963945 (Cars2)
Transfer RNA biogenesis [BR:
iti03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101963945 (Cars2)
Prokaryotic type
101963945 (Cars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
DALR_2
tRNA-synt_1
tRNA-synt_1f
CysS_C
Motif
Other DBs
NCBI-GeneID:
101963945
NCBI-ProteinID:
XP_005317040
UniProt:
I3MIN2
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MLRARAFGLLARLLPAALGPGLSRTACEGRGRAWLQPEGRDTGVQVYNSLTGRKDPLIVA
RADATSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVFGCNIVMVMGVTDVDDKIIKR
AHEMKVSPASLASLYEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIARGCAYPT
VKGNVYFDLQSRGDKYGRLVGVAPGPAGEPGDSDKRHASDFALWKAAKPQEVFWASPWGN
GRPGWHIECSAMASMVFGGQLDIHSGGVDLAFPHHENEIAQCEVFHQCEQWGNYFLHSGH
LHVKGKEEKMSKSLKNYITIKDFLQTFSPEVFRLFCMCSSYRSAIDYCDSTMLEARQLLL
GLASFVEDARAYVKGQLICDPVKEDLLWERLTSTKEAVKAALADDFDTPRAVGTILDLVH
HGNRQLRAVTKEPGGPRSPAVFGAIVSYIEQFFETVGISLVKQQCISGDSSVATLHSVVD
ELVRFRLKVRQYALTTPEAAGDARRQLLLERRPLLEACDALRQDLATHGISIKDRSSTTS
TWELLDPRTKHQKPGS
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgggcgcgcgcgttcggcctgctcgcccggctgctcccagccgcgctgggcccg
gggctgagccggacggcgtgcgaggggcgcgggcgggcctggttacagccggagggccgc
gacacgggcgtgcaggtgtacaacagcctcacgggcaggaaggacccgctgatcgtagcc
cgcgcggacgccacctcctggtatagctgtggaccaactgtatacgatcacgcacacctt
ggccatgcttgttcatatgttagatttgatataattcgaaggatcctaaccaaggttttt
gggtgcaacatagtcatggtgatgggtgttacagacgtggatgacaaaatcatcaaaaga
gcccatgagatgaaggtgtcacctgcttcactggccagtctgtatgaagaagattttaag
caggacatggcagccctgaaggttctccctccaacagtgtacttgagagtaactgaaaac
attcctcagataatctcgttcattgaaggaattattgctcgtgggtgtgcctatccaaca
gtaaaaggcaacgtctactttgatctgcagtcaagaggagacaagtatggcagactggtc
ggcgtggcacctgggcctgctggagagccaggggactcagacaagcggcacgctagtgac
tttgccctgtggaaggcagctaagccccaggaggtgttctgggcctcgccctgggggaac
ggcaggcccggctggcacatcgaatgctccgccatggccagcatggtgtttggaggtcag
ctggatatccactcaggtggggtggacttagcgtttccccatcacgagaacgagattgca
cagtgtgaggtcttccatcagtgtgagcagtggggaaattattttctacattccgggcat
ttgcacgtaaaaggcaaagaagaaaaaatgtccaaatcattgaaaaactacatcactatt
aaggactttctgcagacattctcccccgaagtcttccggctcttctgcatgtgcagcagc
tacaggtcagccatcgactactgtgacagcaccatgctggaagccaggcagctcctgctg
gggctggcctcttttgtggaggacgcacgtgcctacgttaaggggcagctgatctgtgac
cccgtaaaggaagacctgctgtgggaaaggctcaccagcaccaaggaggccgtgaaggct
gcattggcagatgactttgacacacccagggcagttggcaccatcctggaccttgtgcac
catgggaacagacagctcagagcagtcactaaggagcctgggggtcccaggagccctgct
gtgtttggtgccattgtctcctacattgagcaattttttgagactgttggaatttctcta
gtaaaacaacagtgcatttcaggagacagcagtgtggctactctgcacagcgtggtggat
gagctggtgcgcttccggctgaaggtccggcagtatgcactgaccacacctgaggctgct
ggggatgcccggcgacagctactcctggagaggcggcccttgctggaggcatgtgatgca
ctgcgccaggaccttgccacgcatggcatcagcatcaaggacagaagcagcactacctcc
acatgggaactgttggatcccaggacaaaacaccagaagccaggaagctga
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