Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101964029
Help
Entry
101964029 CDS
T10664
Symbol
Cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X1
KO
K24223
cilia- and flagella-associated protein 43
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
Cilium and associated proteins [BR:
iti03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
101964029 (Cfap43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101964029
NCBI-ProteinID:
XP_040128659
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MVRTQNNSCLRFVNIVIICLGWYHFSTRPQGPALRFARARPLAETRKHFHQSAGLRKTRT
GGGANGRRITVAWIRCKQWRFLEPRSPNSRVTVTDPNSVRRLLPAAPPRRGPWRKAGKEK
RVLMLSLPPAARRCRWVQGFPKQNVHFVTEDTICYPSGNYVIFINIETKTKTVLQCINGI
VGVVATNIPYEVVAFSDRKLKPNIYIYNFPGLTRRTKLKGNILLDYTLLTFSYCGTYLAS
YSSLPEFELALWNWESNVILCKKSQPGLDVSQLSFNPMNWRQLCLSSPSTVNVWTIERSN
QEHYIKARSVKLPLEDGTFVNETDVLFPHSLPKDLIYGPVLPLSAIAGLVGEEAETFRPK
DDLYPLLHPTMHCWTPSSDLYVGCEEGHLLMINGETLKVTVLQKIEDMTQSEPHHISPVS
LVYQKDGVFASGIEGSVYSFIIKDSSYKVETFLETEGPVEHMLFSPSYKMLLIQTDKGSV
YIYTFNEKPTLEKVLDACDGKFQAIDFITPGTKYFMTVTHSGEVCIWWMEDCICESRIYL
NTPTTALACSPSSHSAVVGTVDGYVYFLDVQEVDSPGVIHKAFLSKSAVQHLIFDQRGIF
LFVGSSEGNIFIMNANPSSSFEILGFVEVSKDILQISTVSLLEVDVVQVLVLSSLPDAEK
SRLELFTVPKILPTVSESFTDERGKLKEELIHLNLYEMEHTLSSAVLDFQSNQIYGFCNQ
APYICSYLLPEKQEDTKVCILKPHQKVQSKHYGTGMLYLSWHGLWLITIAKCGILCIRDI
YTLETFARCRSHSHQAHGIQSMRISMDGQSILVNGKDDSTLVYLKWKRTGGIYGDECIDY
FQKLLTFLSKTIAEENYYLNSPRVSLDLGYDFKYSIDSSQEELATEESKKEIPWIQWKSQ
EAVEKEIKMFSQKRKEIRRGIKELAKTVLNMMEENEKLDNIAKLEQQEFGLDLEELERLH
EESEEEVAKIRKDVEMHNLAKGYLTEVIKEECWNAMAVKGRALKCFHIPYVVENFPMKER
SSEELKELKTVLQQKKIEAECLKLRKEISEVQSAVSLVKKRHEEDDEEEEDEDKIIRDSN
LPNYLLGSLSTDFGVDTSLLSSQLELHSREEKINQITLLKDIIYKVKTAFNNEFDAAYKQ
KEFEITRVTERNVRIREIISDLELEETVWQPEFEDCEKPERTFVVEDHEITAQKHVSPWQ
KAKTELISPHETERWLHSQDLDVRNRALMDMMGGVLEVKKEDILRMVIPQPAFMIKPDAL
WTEEERKQFKEYEKKVKELNEERDKYRKSLETELKKLQNSIQESTQSFDELLKKLFERRV
KAEMVINQEELKINNLVFSLLLEEELTSREIFLNNYLVRKQQEKNQTSEAIQKSREELDA
FKEHYDNLMAEDKVLDRSFKKEFSEIPSHQVDLLYKLFKRRPRIHKQKAHTEAASSTPFG
ERPGSGKLNKDTFAHLMKAMDELDNINNMPEGLDPSVWDHFCATRRAKVENEHKTQGQKK
VASMMESKEVHKGIYQIEWEHKKMEMEMEDLNQKAWDIQMLFFSRQRQKYLNESNYETLI
AIQIGIMEQTIQVIDKTHKKNVENCKKLLKKLEKFSNQKDVANYTLSCNLREELVAVSER
KDICNAMGTQLTCEKIVKERYKNMVQQQKLTNISKQQAEQISILQAEVERLRMKTFPALV
QM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggtcaggactcaaaataatagctgtttgaggtttgttaatattgtaattatttgctta
ggatggtaccacttcagcacccgtccccaggggcccgccctccgcttcgctcgcgctcgc
ccattggcagaaacgcggaagcacttccaccaatccgctggactccgcaagacccggaca
gggggcggagccaatgggcgcaggattacagtcgcctggatacgctgtaaacagtggagg
tttctcgagcctcgcagccccaacagccgagtaaccgttacagaccctaactcggtccgg
cgcttgctgcccgccgccccgccccgccgaggcccatggcgcaaagcagggaaggagaag
agagtccttatgctgtctcttcccccagcggcgcgacgctgtcgatgggtgcaaggattc
cctaagcagaatgttcattttgttaccgaagacaccatttgctaccctagtgggaattat
gtaatatttattaatattgaaaccaagacaaagactgtactccagtgtattaatggaatt
gtgggcgtcgtggcaactaacattccttatgaagttgtggctttttctgaccggaagcta
aaacccaacatctacatatacaactttcctggattgaccagaaggaccaaattaaaaggc
aacattcttctggactacactttacttaccttcagttactgtggcacctacttggctagt
tactcctctcttccagaatttgaactggccctctggaactgggaatccaatgtcatcttg
tgcaagaaatcccagcctggtctggatgtgagccagctgtcttttaatcccatgaactgg
cgccagctctgcttatcaagtccaagtacagtgaatgtgtggaccatcgaaagaagtaac
caggagcattatatcaaagcaaggtcggtaaaactgcctctagaagatggcacatttgtt
aatgaaacagatgtgcttttcccccactcattgcccaaggatctcatctacggacctgtg
ctgccactgtcagccattgctgggctagtaggtgaagaggcagaaactttccggccaaaa
gacgatttatatcctttgcttcaccccactatgcattgctggactccatcaagtgacctg
tatgttggctgcgaagagggtcatcttttaatgattaatggagaaaccttaaaggtgacc
gtgctccaaaagatagaagacatgacacagtcagaacctcatcatatcagcccagtcagc
ctggtgtatcagaaagatggagtgtttgcttctggaattgaaggctctgtgtactccttc
attattaaagattcaagttataaagtggagacttttcttgagactgaagggcctgtagaa
catatgctgttttctcccagttacaaaatgttgctgattcaaacagacaagggatctgtt
tatatctacacttttaatgagaagccaaccttagaaaaagtcctagatgcttgtgatggg
aaattccaagcaattgactttatcacacctggaaccaaatacttcatgacagtcacacat
tcaggggaagtttgtatttggtggatggaggattgtatttgtgaaagcaggatttatctg
aatactccaaccacagccctggcttgctctccctcctcccactccgctgttgtggggact
gtggatggttacgtgtacttcctggatgtccaagaggtggactcccctggggtgatccac
aaggccttcctctccaagtctgctgtgcagcacctcatttttgaccagcgaggaatattt
ctgtttgttggatcctcagaaggaaacatctttattatgaatgccaatccttcaagctca
tttgagatcctaggattcgtagaggtgagcaaggacattctacaaatatccacggtgtct
cttttggaagtagacgtggtacaagtattggtgctttcttcacttccagatgcagaaaaa
agcaggttggaattatttactgtgcccaaaatactaccaacagtttctgaaagcttcact
gatgaaagagggaaactgaaagaggagctgattcatttgaacctgtatgagatggagcac
actctgtcctctgcagtcttggactttcaaagtaaccaaatatatggcttctgtaatcaa
gcaccgtacatctgtagctatcttcttcctgaaaaacaggaagataccaaggtttgtatt
cttaagccacaccaaaaagtgcaaagcaagcattatggaactggaatgctctatctatct
tggcatggattgtggctcataacaatagctaaatgtggaattctgtgtatccgagatatt
tatactttggaaacatttgctcggtgtcggagtcattctcatcaggcgcatgggattcag
tccatgagaatttcaatggatggacaaagtattctggtgaatgggaaagatgacagcacc
ctggtttacctaaaatggaagcgcactggaggaatttatggcgatgaatgtattgattat
ttccagaaactacttacatttctgagcaagaccatagcagaggagaattattatttaaac
tctccaagagtttctttagatttgggatatgactttaaatattcaattgactcgtcacaa
gaagaattagccactgaggagagtaagaaggaaattccctggatacaatggaaaagccaa
gaggcagtcgaaaaggaaattaaaatgttttcccagaaaaggaaagagataagaagagga
atcaaagaacttgctaaaactgttctgaatatgatggaagaaaatgagaaactggataat
attgcaaaattagaacaacaggagttcggcctggatcttgaggaactggaaaggctccat
gaagaaagtgaagaggaggtggccaagataagaaaggatgtagagatgcacaatctagcc
aagggctacttgactgaggttatcaaagaagaatgctggaatgccatggctgtgaagggc
cgagcacttaagtgctttcacatcccttatgtggtcgagaacttcccgatgaaagagcgc
tcaagtgaagagctgaaggaattgaagacagtcttgcagcaaaagaagattgaagcagag
tgtcttaaactacggaaggaaatttcagaggttcaatctgcagtctccttggttaaaaag
cgtcatgaagaagatgatgaagaagaagaagatgaagataagataatcagagactccaac
ttgcccaattacctgcttggtagtttgagtactgattttggggtagatacctctttgtta
tcaagccaattggaacttcactccagagaggagaagatcaaccaaattaccttactaaaa
gatatcatttacaaggtaaaaactgctttcaataatgagtttgatgctgcatataaacaa
aaagagtttgaaatcacacgtgtgacggaaagaaatgttagaattagagaaattatttca
gatctggagttggaggaaacagtctggcaaccagaatttgaagactgtgagaaaccagag
agaacctttgttgtagaggatcatgagattacagctcaaaaacatgtttctccatggcaa
aaagccaaaacagaattgatttcaccccatgaaacagagcgatggcttcattcacaggat
ttggacgttagaaacagagccctgatggacatgatgggaggtgttctggaagtcaagaag
gaagacattttgagaatggtgattcctcagcctgctttcatgataaagcctgatgcactg
tggacagaagaggaaaggaaacaattcaaagaatatgagaaaaaagtcaaggagttaaat
gaagaaagagataagtatagaaagtcattagaaacagaattgaagaaacttcaaaactca
attcaagaaagcacacagagctttgatgaacttttgaaaaaactctttgaaagaagagtg
aaggccgagatggttatcaaccaggaggaattgaaaataaataaccttgtgttttctcta
ctgttggaagaggaattaacctccagagaaattttcctgaacaactaccttgtaaggaag
cagcaggagaaaaaccagacttcggaagccatccagaaatctagagaagaactggatgca
tttaaggagcactatgacaacttaatggcagaagacaaggttctggatcgaagctttaaa
aaggaattttctgaaattcccagtcatcaggtggatctactctacaaactttttaaacgc
cgaccaaggattcacaaacagaaagcacacacagaggcagccagtagtaccccatttgga
gaacgaccgggatctggcaagttgaataaggacacttttgcccacttaatgaaagccatg
gatgagttggataatattaacaacatgccagaaggcttggacccttcagtctgggatcat
ttctgtgcaaccagacgagcaaaagttgaaaatgaacacaaaactcaaggtcaaaagaaa
gttgctagcatgatggaaagtaaagaggtacacaaaggaatatatcaaattgagtgggaa
cataagaaaatggagatggaaatggaagacctaaatcagaaggcctgggatattcagatg
ctgtttttttcaagacagcgtcaaaagtacctaaatgaatcgaactacgagactctgatt
gctattcagattggaataatggagcaaaccattcaagttatagataagacccacaaaaag
aatgtcgaaaactgcaaaaaactactcaaaaaattggaaaaattcagtaatcaaaaagat
gtagcaaattacactctaagctgcaatctacgagaagagttggtagctgtgtcagagaga
aaagacatctgcaatgcaatggggacgcaactgacttgtgaaaagattgtcaaagaacga
tataaaaacatggtgcaacaacagaagctgacaaatatttcaaaacaacaggctgaacag
atttcaatactacaagcagaagttgaaagattaaggatgaaaacatttcctgctcttgtt
caaatgtaa
DBGET
integrated database retrieval system
